Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_15879 Corylus avellana HOM05D008383 ORTHO05D010186 6.3e-35 150.2 75 100.0
Haze_15885 Corylus avellana HOM05D008383 ORTHO05D010186 1.4e-31 139.0 75 94.7
Haze_15886 Corylus avellana HOM05D008383 ORTHO05D010186 1.9e-31 138.7 75 93.3
Haze_15884 Corylus avellana HOM05D008383 ORTHO05D010186 3.0e-29 131.3 75 89.3
CiPaw.02G144300 Carya illinoinensis HOM05D008383 ORTHO05D010186 2.6e-17 91.7 74 66.2
RcHm_v2.0_Chr2g0141731 Rosa chinensis HOM05D008383 ORTHO05D010186 1.1e-15 86.3 73 64.4
CiPaw.01G229300 Carya illinoinensis HOM05D008383 ORTHO05D010186 2.5e-15 85.1 73 67.1
Prupe.6G069400 Prunus persica HOM05D008383 ORTHO05D010186 3.2e-15 84.7 74 60.8
Medtr2g100440 Medicago truncatula HOM05D008383 ORTHO05D010186 3.6e-14 81.3 63 65.1
MD17G1179900 Malus domestica HOM05D008383 ORTHO05D010186 1.0e-13 79.7 72 61.1
CiPaw.01G228700 Carya illinoinensis HOM05D008383 ORTHO05D010186 5.7e-12 73.9 59 66.1
Migut.I00966 Erythranthe guttata HOM05D008383 ORTHO05D010186 5.7e-12 73.9 77 54.5
MD09G1198900 Malus domestica HOM05D008383 ORTHO05D010186 7.5e-12 73.6 63 57.1
FvH4_6g32710 Fragaria vesca HOM05D008383 ORTHO05D010186 6.3e-11 70.5 73 57.5
FAN02G1950 Fragaria x ananassa HOM05D008383 ORTHO05D010186 6.3e-11 70.5 73 57.5
FAN05G1942 Fragaria x ananassa HOM05D008383 ORTHO05D010186 1.1e-10 69.7 73 56.2
Potri.001G172850 Populus trichocarpa HOM05D008383 ORTHO05D010186 1.8e-10 68.9 79 58.2
Prupe.3G074000 Prunus persica HOM05D008383 ORTHO05D010186 1.8e-10 68.9 59 61.0
ClCG09G000350 Citrullus lanatus HOM05D008383 ORTHO05D010186 2.4e-10 68.6 80 53.8
MD09G1199000 Malus domestica HOM05D008383 ORTHO05D010186 2.4e-10 68.6 75 53.3
CiPaw.01G229000 Carya illinoinensis HOM05D008383 ORTHO05D010186 3.1e-10 68.2 71 56.3
CiPaw.01G229400 Carya illinoinensis HOM05D008383 ORTHO05D010186 3.1e-10 68.2 71 56.3
Dinv30420 Davidia involucrata HOM05D008383 ORTHO05D010186 3.1e-10 68.2 75 56.0
Thecc.06G103000 Theobroma cacao HOM05D008383 ORTHO05D010186 4.1e-10 67.8 75 49.3
Manes.11G030500 Manihot esculenta HOM05D008383 ORTHO05D010186 7.0e-10 67.0 65 55.4
Potri.003G061000 Populus trichocarpa HOM05D008383 ORTHO05D010186 7.0e-10 67.0 61 57.4
CANSAT56G2911 Cannabis sativa HOM05D008383 ORTHO05D010186 9.1e-10 66.6 71 53.5
Potri.003G061200 Populus trichocarpa HOM05D008383 ORTHO05D010186 1.6e-09 65.9 76 53.9
Rhsim12G0203900 Rhododendron simsii HOM05D008383 ORTHO05D010186 1.6e-09 65.9 75 56.0
Sabra03G0035400 Salix brachista HOM05D008383 ORTHO05D010186 3.5e-09 64.7 77 53.2
Sed0020534 Sechium edule HOM05D008383 ORTHO05D010186 7.7e-09 63.5 80 50.0
Rhsim12G0204000 Rhododendron simsii HOM05D008383 ORTHO05D010186 1.0e-08 63.2 75 52.0
COL.COLO4_30545 Corchorus olitorius HOM05D008383 ORTHO05D010186 2.2e-08 62.0 78 47.4
THA.LOC104810546 Tarenaya hassleriana HOM05D012542 ORTHO05D010186 2.2e-08 62.0 75 46.7
Aa31LG10G2880 Aethionema arabicum HOM05D012542 ORTHO05D010186 2.9e-08 61.6 76 46.1
Carub.0001s4085 Capsella rubella HOM05D012542 ORTHO05D010186 2.9e-08 61.6 77 45.5
DCAR_007598 Daucus carota HOM05D008383 ORTHO05D010186 5.0e-08 60.8 73 53.4
Sed0013242 Sechium edule HOM05D008383 ORTHO05D010186 8.5e-08 60.1 66 50.0
CsaV3_7G035160 Cucumis sativus L. HOM05D008383 ORTHO05D010186 1.9e-07 58.9 73 50.7
AT1G51920 Arabidopsis thaliana HOM05D012542 ORTHO05D010186 3.2e-07 58.2 67 47.8
Nn8g38998 Nelumbo nucifera HOM05D008383 ORTHO05D010186 3.2e-07 58.2 69 49.3
Hma1.2p1_0764F.1_g215000 Hydrangea macrophylla HOM05D008383 ORTHO05D010186 1.6e-06 55.8 74 51.4
GSVIVG01016930001 Vitis vinifera HOM05D008383 ORTHO05D010186 6.1e-06 53.9 49 57.1
TAR626G1700 Trochodendron aralioides HOM05D001398 ORTHO05D001467 8.0e-06 53.5 60 46.7


User provided reference genes

Program Settings