Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_15797 Corylus avellana HOM05D004483 ORTHO05D005609 1.4e-122 443.0 227 100.0
Haze_16727 Corylus avellana HOM05D004483 ORTHO05D005609 2.5e-111 405.6 228 93.0
Haze_25407 Corylus avellana HOM05D004483 ORTHO05D005609 1.4e-109 399.8 228 91.2
Cfa003690 Carpinus fangiana HOM05D004483 ORTHO05D005609 2.0e-92 342.8 189 92.6
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 4.8e-86 321.6 220 80.5
Lalb_Chr07g0191411 Lupinus albus HOM05D004483 ORTHO05D005609 6.9e-85 317.8 220 78.6
Eucgr.E01755 Eucalyptus grandis HOM05D004483 ORTHO05D005609 9.0e-85 317.4 220 78.6
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea HOM05D004483 ORTHO05D005609 1.2e-84 317.0 220 78.2
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 2.0e-84 316.2 220 79.1
PGR042G2637 Punica granatum HOM05D004483 ORTHO05D005609 4.5e-84 315.1 220 77.7
VMungo0331G1733 Vigna mungo HOM05D004483 ORTHO05D005609 1.3e-83 313.5 220 78.2
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 1.7e-83 313.2 220 78.2
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 2.2e-83 312.8 220 78.6
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 2.2e-83 312.8 220 78.6
Phvul.010G078100 Phaseolus vulgaris HOM05D004483 ORTHO05D005609 2.9e-83 312.4 220 78.2
Duzib106G2041 Durio zibethinus HOM05D004483 ORTHO05D005609 3.8e-83 312.0 220 78.2
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 4.9e-83 311.6 220 77.7
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 6.4e-83 311.2 220 77.3
Lj3g0001477 Lotus japonicus HOM05D004483 ORTHO05D005609 6.4e-83 311.2 220 77.3
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 8.4e-83 310.8 220 76.8
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 1.1e-82 310.5 220 76.8
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 1.1e-82 310.5 220 76.8
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 1.4e-82 310.1 220 78.2
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea HOM05D004483 ORTHO05D005609 1.9e-82 309.7 226 76.1
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 2.4e-82 309.3 220 77.7
TPR.G14295 Trifolium pratense HOM05D004483 ORTHO05D005609 2.4e-82 309.3 220 76.8
TPR.G40218 Trifolium pratense HOM05D004483 ORTHO05D005609 2.4e-82 309.3 220 76.8
MD02G1233800 Malus domestica HOM05D004483 ORTHO05D005609 4.2e-82 308.5 221 77.8
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 4.2e-82 308.5 220 77.7
Ca_04019_v3 Cicer arietinum L. HOM05D004483 ORTHO05D005609 5.4e-82 308.1 220 77.3
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 7.1e-82 307.8 220 77.3
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 7.1e-82 307.8 220 77.3
MD02G1233500 Malus domestica HOM05D004483 ORTHO05D005609 1.2e-81 307.0 220 77.7
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 1.2e-81 307.0 220 75.9
Psat0s3493g0040 Pisum sativum HOM05D004483 ORTHO05D005609 1.6e-81 306.6 220 75.9
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 1.6e-81 306.6 220 75.9
Glyma.01G118200 Glycine max HOM05D004483 ORTHO05D005609 2.1e-81 306.2 220 76.8
Glyma.03G055200 Glycine max HOM05D004483 ORTHO05D005609 4.6e-81 305.1 220 76.4
Glyma.U006202 Glycine max HOM05D004483 ORTHO05D005609 4.6e-81 305.1 220 76.4
Medtr5g046560 Medicago truncatula HOM05D004483 ORTHO05D005609 4.6e-81 305.1 220 75.5
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 6.0e-81 304.7 220 76.8
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 7.9e-81 304.3 220 75.9
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 1.3e-80 303.5 220 76.4
SalBow4G2429 Salvia bowleyana HOM05D004483 ORTHO05D005609 1.3e-80 303.5 220 75.0
GSVIVG01019237001 Vitis vinifera HOM05D004483 ORTHO05D005609 1.8e-80 303.1 221 76.0
Medtr6g049240 Medicago truncatula HOM05D004483 ORTHO05D005609 2.3e-80 302.8 220 74.5
TAR636G0699 Trochodendron aralioides HOM05D004483 ORTHO05D005609 2.3e-80 302.8 220 75.0
Cc00_g12630 Coffea canephora HOM05D004483 ORTHO05D005609 3.9e-80 302.0 220 74.1
Migut.N01676 Erythranthe guttata HOM05D004483 ORTHO05D005609 3.9e-80 302.0 220 74.5
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 5.1e-80 301.6 220 74.5
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 6.7e-80 301.2 220 75.9
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 6.7e-80 301.2 220 75.0
TWI32G0950 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 8.7e-80 300.8 220 75.9
TAR636G1741 Trochodendron aralioides HOM05D004483 ORTHO05D005609 8.7e-80 300.8 220 75.0
EL10Ac1g00530 Beta vulgaris HOM05D004483 ORTHO05D005609 1.9e-79 299.7 220 74.1
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 1.9e-79 299.7 220 74.1
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 1.9e-79 299.7 220 74.1
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 1.9e-79 299.7 220 74.1
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 1.9e-79 299.7 220 74.1
MSTRG.4986 Avicennia marina HOM05D004483 ORTHO05D005609 2.5e-79 299.3 220 73.6
Nn7g36866 Nelumbo nucifera HOM05D004483 ORTHO05D005609 2.5e-79 299.3 220 75.5
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 4.3e-79 298.5 220 73.6
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 4.3e-79 298.5 220 73.6
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 7.4e-79 297.7 220 73.2
TWI34G1657 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 9.6e-79 297.4 220 75.5
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 1.3e-78 297.0 220 73.6
AUR62004320 Chenopodium quinoa HOM05D004483 ORTHO05D005609 1.6e-78 296.6 220 73.6
AUR62033324 Chenopodium quinoa HOM05D004483 ORTHO05D005609 1.6e-78 296.6 220 73.6
AUR62033335 Chenopodium quinoa HOM05D004483 ORTHO05D005609 1.6e-78 296.6 220 73.6
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 1.6e-78 296.6 220 73.2
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 2.8e-78 295.8 220 72.7
MD07G1080100 Malus domestica HOM05D004483 ORTHO05D005609 2.8e-78 295.8 220 76.4
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 3.7e-78 295.4 220 73.2
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 3.7e-78 295.4 220 73.2
Hund27300 Selenicereus undatus HOM05D004483 ORTHO05D005609 3.7e-78 295.4 220 73.6
Potri.019G044100 Populus trichocarpa HOM05D004483 ORTHO05D005609 6.2e-78 294.7 220 74.1
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 6.2e-78 294.7 220 72.3
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 6.2e-78 294.7 220 73.2
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 8.1e-78 294.3 220 73.2
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 1.1e-77 293.9 167 92.2
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 1.8e-77 293.1 220 72.7
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 2.4e-77 292.7 220 72.7
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 2.4e-77 292.7 221 72.4
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 4.0e-77 292.0 220 72.7
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 6.9e-77 291.2 221 72.4
PSO170G6334 Papaver somniferum HOM05D004483 ORTHO05D005609 6.9e-77 291.2 220 72.7
PSO782G4616 Papaver somniferum HOM05D004483 ORTHO05D005609 6.9e-77 291.2 220 72.7
HanXRQChr01g0019801 Helianthus annuus HOM05D004483 ORTHO05D005609 9.0e-77 290.8 220 71.8
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 1.2e-76 290.4 221 72.9
Actinidia05827 Actinidia chinensis HOM05D004483 ORTHO05D005609 1.5e-76 290.0 222 72.1
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 3.4e-76 288.9 220 72.3
Rhsim07G0047000 Rhododendron simsii HOM05D004483 ORTHO05D005609 4.5e-76 288.5 220 71.4
CSS0029990 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.0e-75 287.3 220 72.3
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 1.0e-75 287.3 220 70.9
CSS0005411 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.3e-75 287.0 220 70.9
Lsat_1_v5_gn_1_89980 Lactuca sativa HOM05D004483 ORTHO05D005609 1.7e-75 286.6 220 70.9
CSS0038619 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 3.8e-75 285.4 220 70.5
FvH4_3g28610 Fragaria vesca HOM05D004483 ORTHO05D005609 3.8e-75 285.4 220 73.2
FAN25G2123 Fragaria x ananassa HOM05D004483 ORTHO05D005609 3.8e-75 285.4 220 73.6
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 3.8e-75 285.4 258 65.5
Rhsim07G0125200 Rhododendron simsii HOM05D004483 ORTHO05D005609 3.8e-75 285.4 220 70.0
SEGI_12813 Sequoiadendron giganteum HOM05D004483 ORTHO05D005609 3.8e-75 285.4 220 69.5
HanXRQChr11g0343751 Helianthus annuus HOM05D004483 ORTHO05D005609 6.5e-75 284.6 221 71.0
THA.LOC104802894 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 1.1e-74 283.9 220 70.9
TPR.G9231 Trifolium pratense HOM05D004483 ORTHO05D005609 4.2e-74 282.0 226 69.9
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 4.2e-74 282.0 247 64.4
FAN21G3783 Fragaria x ananassa HOM05D004483 ORTHO05D005609 9.3e-74 280.8 220 72.3
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 1.0e-72 277.3 220 72.7
Os01g0869500 Oryza sativa ssp. japonica HOM05D004483 ORTHO05D005609 1.0e-72 277.3 220 67.7
Zm00001eb172120 Zea mays HOM05D004483 ORTHO05D005609 3.0e-72 275.8 220 66.8
ATR0736G160 Amborella trichopoda HOM05D004483 ORTHO05D005609 8.7e-72 274.2 217 70.0
Oeu041518.1 Olea europaea HOM05D004483 ORTHO05D005609 8.7e-72 274.2 167 84.4
CDE08G1003 Ceratophyllum demersum HOM05D004483 ORTHO05D005609 2.5e-71 272.7 220 67.3
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 2.8e-70 269.2 225 68.4
TAR636G1618 Trochodendron aralioides HOM05D004483 ORTHO05D005609 9.0e-69 264.2 197 74.1
unitig_61.g26200 Utricularia gibba HOM05D004483 ORTHO05D005609 7.6e-68 261.2 222 65.8
Medtr4g017150 Medicago truncatula HOM05D004483 ORTHO05D005609 1.0e-64 250.8 219 65.3
SMO266G0007 Selaginella moellendorffii HOM05D004483 ORTHO05D005609 3.9e-64 248.8 215 60.9
FAN25G2538 Fragaria x ananassa HOM05D004483 ORTHO05D005609 4.5e-60 235.3 266 57.5
Mapoly0042s0051 Marchantia polymorpha HOM05D004483 ORTHO05D005609 3.6e-57 225.7 223 58.7
Pp3c21_22490 Physcomitrium patens HOM05D004483 ORTHO05D005609 7.9e-57 224.6 218 55.0
CSS0030130 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 3.7e-54 215.7 190 66.8
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 9.1e-53 211.1 174 67.8
DCAR_025006 Daucus carota HOM05D004483 ORTHO05D005609 1.2e-52 210.7 221 58.8
SHI14408 Sapria himalayana HOM05D004483 ORTHO05D005609 5.2e-40 168.7 191 52.9
CBR_g5742 Chara braunii HOM05D004483 ORTHO05D005609 6.7e-40 168.3 218 45.9
Actinidia31738 Actinidia chinensis HOM05D004483 ORTHO05D005609 3.7e-38 162.5 226 45.6
BraA10t44239Z Brassica rapa HOM05D004483 ORTHO05D005609 7.2e-34 148.3 204 47.5
A10p21790 Brassica napus HOM05D004483 ORTHO05D005609 3.0e-32 142.9 162 54.9
MD09G1234100 Malus domestica HOM05D004483 ORTHO05D005609 5.2e-32 142.1 124 64.5
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 1.3e-30 137.5 219 43.8
Peaxi162Scf00040g00102 Petunia axillaris HOM05D004483 ORTHO05D005609 5.4e-29 132.1 88 75.0
Peaxi162Scf00040g00103 Petunia axillaris HOM05D004483 ORTHO05D005609 5.9e-28 128.6 117 62.4
HPP92_018030 Vanilla planifolia HOM05D004483 ORTHO05D005609 2.2e-27 126.7 122 57.4
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 2.9e-27 126.3 219 41.6
Medtr5g046460 Medicago truncatula HOM05D004483 ORTHO05D005609 5.5e-26 122.1 74 81.1
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 7.0e-21 105.1 68 79.4
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea HOM05D004483 ORTHO05D005609 2.0e-20 103.6 82 67.1
arahy.Tifrunner.gnm1.ann1.LP3G76 Arachis hypogaea HOM05D004483 ORTHO05D083770 5.8e-07 58.9 85 44.7
Duzib106G1834 Durio zibethinus HOM05D004483 ORTHO05D005609 4.9e-06 55.8 31 93.5


User provided reference genes

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