Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_15549 Corylus avellana HOM05D003847 ORTHO05D004976 1.1e-237 826.2 416 100.0
ClCG05G001330 Citrullus lanatus HOM05D003847 ORTHO05D004976 4.2e-205 718.0 387 92.0
Cfa003885 Carpinus fangiana HOM05D003847 ORTHO05D004976 6.7e-203 710.7 373 96.2
Dinv43851 Davidia involucrata HOM05D003847 ORTHO05D004976 3.3e-202 708.4 387 90.2
COL.COLO4_12761 Corchorus olitorius HOM05D003847 ORTHO05D004976 1.1e-200 703.4 425 82.6
QL04p055042 Quercus lobata HOM05D003847 ORTHO05D004976 1.1e-200 703.4 424 84.2
GSVIVG01026981001 Vitis vinifera HOM05D003847 ORTHO05D004976 1.8e-200 702.6 425 83.3
Thecc.01G354200 Theobroma cacao HOM05D003847 ORTHO05D004976 1.5e-199 699.5 425 82.8
MELO3C006089.2 Cucumis melo HOM05D003847 ORTHO05D004976 2.0e-199 699.1 425 83.5
CsaV3_3G008710 Cucumis sativus L. HOM05D003847 ORTHO05D004976 2.0e-199 699.1 425 83.3
CSS0029735 Camellia sinensis var. sinensis HOM05D003847 ORTHO05D004976 5.9e-199 697.6 425 82.6
MBI04_g26959_MAGBIO Magnolia biondii HOM05D003847 ORTHO05D004976 8.4e-198 693.7 393 85.8
Gorai.007G102500 Gossypium raimondii HOM05D003847 ORTHO05D004976 2.5e-197 692.2 425 81.6
Manes.05G031000 Manihot esculenta HOM05D003847 ORTHO05D004976 2.5e-197 692.2 425 81.4
Gohir.A11G091500 Gossypium hirsutum HOM05D003847 ORTHO05D004976 3.2e-197 691.8 425 81.6
CiPaw.01G065300 Carya illinoinensis HOM05D003847 ORTHO05D004976 5.5e-197 691.0 425 83.1
Nitab4.5_0003779g0180 Nicotiana tabacum HOM05D003847 ORTHO05D004976 7.2e-197 690.6 387 87.6
Hma1.2p1_0627F.1_g191710 Hydrangea macrophylla HOM05D003847 ORTHO05D004976 9.3e-197 690.3 425 81.6
Prupe.2G175500 Prunus persica HOM05D003847 ORTHO05D004976 1.2e-196 689.9 425 81.4
Potri.014G088900 Populus trichocarpa HOM05D003847 ORTHO05D004976 1.6e-196 689.5 425 81.6
CANSAT56G2934 Cannabis sativa HOM05D003847 ORTHO05D004976 2.1e-196 689.1 425 82.8
Ciclev10020054m.g Citrus clementina HOM05D003847 ORTHO05D004976 7.9e-196 687.2 432 79.9
Gohir.D11G096200 Gossypium hirsutum HOM05D003847 ORTHO05D004976 7.9e-196 687.2 425 81.2
Sed0007018 Sechium edule HOM05D003847 ORTHO05D004976 1.3e-195 686.4 425 81.6
Nitab4.5_0001702g0130 Nicotiana tabacum HOM05D003847 ORTHO05D004976 1.8e-195 686.0 395 86.3
Cc02_g38410 Coffea canephora HOM05D003847 ORTHO05D004976 2.3e-195 685.6 425 81.6
FAN10G1372 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.1e-194 683.3 424 80.9
Duzib133G1387 Durio zibethinus HOM05D003847 ORTHO05D004976 1.5e-194 682.9 417 81.8
VMungo1383G0817 Vigna mungo HOM05D003847 ORTHO05D004976 1.5e-194 682.9 425 80.5
FAN06G3510 Fragaria x ananassa HOM05D003847 ORTHO05D004976 4.3e-194 681.4 424 80.9
PGR042G1058 Punica granatum HOM05D003847 ORTHO05D004976 4.3e-194 681.4 425 80.9
TWI59G0695 Tripterygium wilfordii HOM05D003847 ORTHO05D004976 7.4e-194 680.6 425 80.2
Solyc01g094930.3 Solanum lycopersicum HOM05D003847 ORTHO05D004976 1.6e-193 679.5 425 79.8
MD01G1069400 Malus domestica HOM05D003847 ORTHO05D004976 2.2e-193 679.1 425 80.2
Potri.002G162700 Populus trichocarpa HOM05D003847 ORTHO05D004976 2.2e-193 679.1 425 80.5
Sopen01g038710 Solanum pennellii HOM05D003847 ORTHO05D004976 2.8e-193 678.7 425 79.8
SalBow5G2471 Salvia bowleyana HOM05D003847 ORTHO05D004976 3.7e-193 678.3 404 82.4
FAN10G2219 Fragaria x ananassa HOM05D003847 ORTHO05D004976 4.8e-193 677.9 424 80.4
Phvul.008G059300 Phaseolus vulgaris HOM05D003847 ORTHO05D004976 4.8e-193 677.9 425 80.2
Glyma.18G237300 Glycine max HOM05D003847 ORTHO05D004976 6.3e-193 677.6 425 80.0
RcHm_v2.0_Chr1g0357201 Rosa chinensis HOM05D003847 ORTHO05D004976 6.3e-193 677.6 425 80.7
Nn1g01640 Nelumbo nucifera HOM05D003847 ORTHO05D004976 1.4e-192 676.4 425 79.3
Glyma.09G255600 Glycine max HOM05D003847 ORTHO05D004976 1.8e-192 676.0 425 79.8
Actinidia02826 Actinidia chinensis HOM05D003847 ORTHO05D004976 5.3e-192 674.5 425 79.3
Migut.N01455 Erythranthe guttata HOM05D003847 ORTHO05D004976 9.0e-192 673.7 425 78.8
Nitab4.5_0001269g0010 Nicotiana tabacum HOM05D003847 ORTHO05D004976 9.0e-192 673.7 377 87.3
Sabra02G0147800 Salix brachista HOM05D003847 ORTHO05D004976 1.2e-191 673.3 449 77.1
CAN.G78.110 Capsicum annuum HOM05D003847 ORTHO05D004976 5.9e-191 671.0 425 79.1
Nitab4.5_0011900g0010 Nicotiana tabacum HOM05D003847 ORTHO05D004976 5.9e-191 671.0 437 78.7
Eucgr.D02317 Eucalyptus grandis HOM05D003847 ORTHO05D004976 7.7e-191 670.6 425 80.2
Lalb_Chr04g0259201 Lupinus albus HOM05D003847 ORTHO05D004976 1.0e-190 670.2 425 77.6
FAN03G1748 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.7e-190 669.5 438 78.1
Medtr7g078760 Medicago truncatula HOM05D003847 ORTHO05D004976 1.7e-190 669.5 423 79.7
vmacro20904 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 1.7e-190 669.5 380 86.1
Sabra14G0064600 Salix brachista HOM05D003847 ORTHO05D004976 5.0e-190 667.9 415 80.7
DCAR_025211 Daucus carota HOM05D003847 ORTHO05D004976 6.5e-190 667.5 425 77.9
FAN01G0997 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.4e-189 666.4 414 81.4
AUR62022605 Chenopodium quinoa HOM05D003847 ORTHO05D004976 1.9e-189 666.0 426 78.2
AUR62004399 Chenopodium quinoa HOM05D003847 ORTHO05D004976 2.5e-189 665.6 426 77.9
Ca_00820_v3 Cicer arietinum L. HOM05D003847 ORTHO05D004976 2.5e-189 665.6 421 79.1
DCAR_008629 Daucus carota HOM05D003847 ORTHO05D004976 3.2e-189 665.2 425 78.1
Lj1g0024026 Lotus japonicus HOM05D003847 ORTHO05D004976 4.2e-189 664.8 425 77.9
Hund16669 Selenicereus undatus HOM05D003847 ORTHO05D004976 5.5e-189 664.5 426 78.2
arahy.Tifrunner.gnm1.ann1.9YV9D4 Arachis hypogaea HOM05D003847 ORTHO05D004976 7.2e-189 664.1 423 78.3
HanXRQChr17g0562361 Helianthus annuus HOM05D003847 ORTHO05D004976 7.2e-189 664.1 425 78.4
ECA234G3268 Erigeron canadensis HOM05D003847 ORTHO05D004976 1.0e-187 660.2 424 78.1
arahy.Tifrunner.gnm1.ann1.P1PLPP Arachis hypogaea HOM05D003847 ORTHO05D004976 1.4e-187 659.8 423 77.8
SGA_v2.0_scaffold43G16402 Striga asiatica HOM05D003847 ORTHO05D004976 1.8e-187 659.4 425 77.2
Sabra02G0148200 Salix brachista HOM05D003847 ORTHO05D004976 2.3e-187 659.1 471 73.5
A09p00040 Brassica napus HOM05D003847 ORTHO05D004976 7.4e-186 654.1 425 77.9
BraA09t35735Z Brassica rapa HOM05D003847 ORTHO05D004976 9.7e-186 653.7 425 77.6
BcaC04g24142 Brassica carinata HOM05D003847 ORTHO05D004976 2.8e-185 652.1 425 77.6
C09p00660 Brassica napus HOM05D003847 ORTHO05D004976 2.8e-185 652.1 425 77.6
BcaB01g02281 Brassica carinata HOM05D003847 ORTHO05D004976 3.7e-185 651.7 425 77.9
CDE11G0931 Ceratophyllum demersum HOM05D003847 ORTHO05D004976 3.7e-185 651.7 425 76.5
THA.LOC104817033 Tarenaya hassleriana HOM05D003847 ORTHO05D004976 3.7e-185 651.7 422 77.7
EL10Ac1g00369 Beta vulgaris HOM05D003847 ORTHO05D004976 6.3e-185 651.0 440 75.0
Lsat_1_v5_gn_4_34641 Lactuca sativa HOM05D003847 ORTHO05D004976 6.3e-185 651.0 425 76.7
Lj9C587T13 Lonicera japonica HOM05D003847 ORTHO05D004976 6.3e-185 651.0 425 78.1
C03p39000 Brassica napus HOM05D003847 ORTHO05D004976 8.2e-185 650.6 425 77.4
BolC3t16172H Brassica oleracea HOM05D003847 ORTHO05D004976 8.2e-185 650.6 425 77.4
TPR.G22298 Trifolium pratense HOM05D003847 ORTHO05D004976 1.1e-184 650.2 423 77.8
Thhalv10028603m.g Eutrema salsugineum HOM05D003847 ORTHO05D004976 1.4e-184 649.8 425 77.9
BolC9t53000H Brassica oleracea HOM05D003847 ORTHO05D004976 2.4e-184 649.0 425 77.2
BraA03t12370Z Brassica rapa HOM05D003847 ORTHO05D004976 2.4e-184 649.0 425 77.4
THA.LOC104825858 Tarenaya hassleriana HOM05D003847 ORTHO05D004976 3.1e-184 648.7 425 76.9
Aqoxy5G04080 Aquilegia oxysepala HOM05D003847 ORTHO05D004976 1.5e-183 646.4 425 76.0
Sc26g0000820 Simmondsia chinensis HOM05D003847 ORTHO05D004976 2.0e-183 646.0 450 73.3
Sp6g00820 Schrenkiella parvula HOM05D003847 ORTHO05D004976 2.6e-183 645.6 425 77.6
ATR0661G289 Amborella trichopoda HOM05D003847 ORTHO05D004976 3.4e-183 645.2 425 75.1
CARHR249000 Cardamine hirsuta HOM05D003847 ORTHO05D004976 1.7e-182 642.9 425 77.2
BcaC01g06856 Brassica carinata HOM05D003847 ORTHO05D004976 2.2e-182 642.5 420 77.4
BcaB01g02153 Brassica carinata HOM05D003847 ORTHO05D004976 2.9e-182 642.1 420 77.1
AT4G01320 Arabidopsis thaliana HOM05D003847 ORTHO05D004976 5.0e-182 641.3 425 77.2
CDE09G0314 Ceratophyllum demersum HOM05D003847 ORTHO05D004976 5.0e-182 641.3 425 75.8
Carub.0006s3638 Capsella rubella HOM05D003847 ORTHO05D004976 1.9e-181 639.4 425 76.9
MSTRG.28227 Avicennia marina HOM05D003847 ORTHO05D004976 9.4e-181 637.1 425 75.3
Duzib138G0396 Durio zibethinus HOM05D003847 ORTHO05D004976 1.2e-180 636.7 399 79.9
RcHm_v2.0_Chr1g0357211 Rosa chinensis HOM05D003847 ORTHO05D004976 2.1e-180 636.0 425 74.4
Os02g0680400 Oryza sativa ssp. japonica HOM05D003847 ORTHO05D004976 2.7e-180 635.6 424 74.3
A03p31980 Brassica napus HOM05D003847 ORTHO05D004976 1.8e-179 632.9 415 77.1
Zm00001eb187240 Zea mays HOM05D003847 ORTHO05D004976 3.9e-179 631.7 426 74.9
FvH4_7g15083 Fragaria vesca HOM05D003847 ORTHO05D004976 4.4e-178 628.2 425 73.6
FAN10G0014 Fragaria x ananassa HOM05D003847 ORTHO05D004976 4.4e-178 628.2 425 73.4
AL6G52080 Arabidopsis lyrata HOM05D003847 ORTHO05D004976 1.8e-176 622.9 413 77.2
Atru.chr5.1381 Acer truncatum HOM05D003847 ORTHO05D004976 9.1e-176 620.5 420 74.0
PSO478G2530 Papaver somniferum HOM05D003847 ORTHO05D004976 2.0e-175 619.4 423 73.8
PSO782G0912 Papaver somniferum HOM05D003847 ORTHO05D004976 7.7e-175 617.5 423 73.5
vmacro04325 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 2.9e-174 615.5 394 76.4
SEGI_36957 Sequoiadendron giganteum HOM05D003847 ORTHO05D004976 7.5e-170 600.9 423 70.9
FAN03G0710 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.7e-169 599.7 419 72.1
Peaxi162Scf00020g01122 Petunia axillaris HOM05D003847 ORTHO05D004976 1.4e-168 596.7 377 79.0
Pp3c4_3300 Physcomitrium patens HOM05D003847 ORTHO05D004976 1.3e-166 590.1 428 68.7
Oeu015226.2 Olea europaea HOM05D003847 ORTHO05D004976 7.2e-165 584.3 411 73.0
FvH4_7g15084 Fragaria vesca HOM05D003847 ORTHO05D004976 3.6e-164 582.0 423 69.7
Oeu036597.2 Olea europaea HOM05D003847 ORTHO05D004976 1.5e-162 576.6 611 53.0
AagrBONN_evm.TU.Sc2ySwM_344.5530 Anthoceros agrestis HOM05D003847 ORTHO05D004976 2.6e-162 575.9 420 67.4
Mapoly0151s0045 Marchantia polymorpha HOM05D003847 ORTHO05D004976 2.6e-162 575.9 423 68.6
TAR629G0433 Trochodendron aralioides HOM05D003847 ORTHO05D004976 5.7e-162 574.7 416 71.6
FAN06G0785 Fragaria x ananassa HOM05D003847 ORTHO05D004976 2.2e-161 572.8 413 70.5
Pp3c12_25070 Physcomitrium patens HOM05D003847 ORTHO05D004976 2.8e-161 572.4 423 66.7
FAN06G4494 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.4e-160 570.1 406 70.9
FAN10G3576 Fragaria x ananassa HOM05D003847 ORTHO05D004976 2.9e-158 562.4 416 68.3
RcHm_v2.0_Chr1g0357271 Rosa chinensis HOM05D003847 ORTHO05D004976 8.5e-158 560.8 411 69.8
arahy.Tifrunner.gnm1.ann1.W45FS6 Arachis hypogaea HOM05D003847 ORTHO05D004976 2.3e-155 552.7 423 68.1
SMO364G0773 Selaginella moellendorffii HOM05D003847 ORTHO05D004976 5.2e-155 551.6 425 63.8
FvH4_7g15081 Fragaria vesca HOM05D003847 ORTHO05D004976 1.5e-154 550.1 347 80.4
Psat3g106680 Pisum sativum HOM05D003847 ORTHO05D004976 8.3e-153 544.3 364 75.5
TAR375G0471 Trochodendron aralioides HOM05D003847 ORTHO05D004976 1.1e-152 543.9 353 75.6
Dinv32510 Davidia involucrata HOM05D003847 ORTHO05D004976 5.4e-152 541.6 304 87.2
Sed0024082 Sechium edule HOM05D003847 ORTHO05D004976 1.7e-150 536.6 348 78.7
HanXRQChr16g0521861 Helianthus annuus HOM05D003847 ORTHO05D004976 6.6e-150 534.6 430 64.4
FAN06G4922 Fragaria x ananassa HOM05D003847 ORTHO05D004976 5.6e-149 531.6 412 66.7
HanXRQChr16g0521851 Helianthus annuus HOM05D003847 ORTHO05D004976 9.5e-149 530.8 410 66.6
FAN10G3432 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.0e-147 527.3 403 67.0
Atru.chr5.547 Acer truncatum HOM05D003847 ORTHO05D004976 1.4e-147 526.9 302 84.8
Aa31LG5G720 Aethionema arabicum HOM05D003847 ORTHO05D004976 3.0e-147 525.8 302 85.4
CBR_g23782 Chara braunii HOM05D003847 ORTHO05D004976 1.0e-139 500.7 411 60.6
FAN10G2623 Fragaria x ananassa HOM05D003847 ORTHO05D004976 2.4e-136 489.6 399 64.7
FAN01G2116 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.6e-135 486.9 383 67.6
HPP92_022235 Vanilla planifolia HOM05D003847 ORTHO05D004976 1.6e-132 476.9 314 78.0
QL12p031965 Quercus lobata HOM05D003847 ORTHO05D004976 4.7e-124 448.7 422 55.5
Hund27252 Selenicereus undatus HOM05D003847 ORTHO05D004976 1.2e-111 407.5 438 51.8
Psat2g071920 Pisum sativum HOM05D003847 ORTHO05D004976 2.1e-111 406.8 252 78.2
Medtr8g028680 Medicago truncatula HOM05D003847 ORTHO05D004976 3.0e-110 402.9 442 51.8
arahy.Tifrunner.gnm1.ann1.U13Q33 Arachis hypogaea HOM05D003847 ORTHO05D004976 4.3e-109 399.1 282 70.9
TAR636G3069 Trochodendron aralioides HOM05D003847 ORTHO05D004976 2.8e-108 396.4 286 70.6
Cre07.g356150 Chlamydomonas reinhardtii HOM05D003847 ORTHO05D004976 1.3e-102 377.5 431 46.6
vmacro05292 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 1.7e-97 360.5 465 45.8
MSTRG.4846 Avicennia marina HOM05D003847 ORTHO05D004976 6.9e-91 338.6 237 73.4
Gohir.A13G099905 Gossypium hirsutum HOM05D003847 ORTHO05D004976 9.3e-88 328.2 199 80.9
PRCOL_00003828 Prasinoderma coloniale HOM05D003847 ORTHO05D004976 7.4e-85 318.5 433 43.0
vmacro05290 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 6.3e-76 288.9 239 62.8
unitig_22.g6721 Utricularia gibba HOM05D001167 ORTHO05D001054 1.3e-73 281.2 164 81.1
Haze_26886 Corylus avellana HOM05D003847 ORTHO05D004976 6.5e-73 278.9 410 39.3
Psat1g001760 Pisum sativum HOM05D003847 ORTHO05D004976 5.1e-70 269.2 168 77.4
Hma1.2p1_0456F.1_g156440 Hydrangea macrophylla HOM05D003847 ORTHO05D004976 4.5e-66 256.1 166 75.3
Cpa.g.sc184.22 Carica papaya HOM05D003847 ORTHO05D004976 1.5e-61 241.1 171 72.5
SalBow5G1235 Salvia bowleyana HOM05D003847 ORTHO05D004976 4.1e-59 233.0 254 53.5
Atru.chr12.614 Acer truncatum HOM05D003847 ORTHO05D004976 3.2e-56 223.4 134 80.6
CANSAT25G3593 Cannabis sativa HOM05D003847 ORTHO05D004976 6.1e-55 219.2 158 72.8
RcHm_v2.0_Chr3g0493601 Rosa chinensis HOM05D003847 ORTHO05D004976 4.0e-38 163.3 96 81.2
Mapoly1163s0001 Marchantia polymorpha HOM05D003847 ORTHO05D026554 1.6e-31 141.4 87 78.2
CANSAT25G0211 Cannabis sativa HOM05D003847 ORTHO05D004976 8.0e-31 139.0 86 80.2
COL.COLO4_08374 Corchorus olitorius HOM05D000137 ORTHO05D000382 3.0e-30 137.1 214 40.2
SGA_v2.0_scaffold190G40413 Striga asiatica HOM05D003847 ORTHO05D004976 2.7e-26 124.0 126 54.8
ATR0763G219 Amborella trichopoda HOM05D003847 ORTHO05D026554 5.8e-21 106.3 61 82.0
RcHm_v2.0_Chr1g0357221 Rosa chinensis HOM05D003847 ORTHO05D026554 1.1e-19 102.1 192 35.9
Lsat_1_v5_gn_8_14540 Lactuca sativa HOM05D003847 ORTHO05D005301 6.0e-18 96.3 168 38.1
MBI19_g13733_MAGBIO Magnolia biondii HOM05D003847 ORTHO05D011443 5.2e-14 83.2 47 85.1
TAR365G1016 Trochodendron aralioides HOM05D000001 ORTHO05D000003 2.0e-13 81.3 54 74.1
vmacro05291 Vaccinium macrocarpon HOM05D003847 ORTHO05D026554 7.1e-11 72.8 48 75.0
Lsat_1_v5_gn_3_43021 Lactuca sativa HOM05D003847 ORTHO05D028506 2.1e-10 71.2 98 43.9
Lsat_1_v5_gn_2_83340 Lactuca sativa HOM05D003847 ORTHO05D028506 3.5e-10 70.5 74 51.4
CAN.G13.12 Capsicum annuum HOM05D002403 ORTHO05D028506 3.0e-09 67.4 46 67.4
Lsat_1_v5_gn_9_59821 Lactuca sativa HOM05D000726 ORTHO05D025737 8.6e-09 65.9 32 87.5
Lsat_1_v5_gn_8_143621 Lactuca sativa HOM05D003847 ORTHO05D028506 1.5e-08 65.1 49 63.3
BcaC03g16052 Brassica carinata HOM05D003847 ORTHO05D004976 5.6e-08 63.2 38 78.9
HanXRQChr14g0436691 Helianthus annuus HOM05D003847 ORTHO05D025737 9.5e-08 62.4 35 77.1
Psat5g164800 Pisum sativum HOM05D003847 ORTHO05D004976 9.5e-08 62.4 101 40.6
CAN.G1511.3 Capsicum annuum HOM05D002403 ORTHO05D002724 1.6e-07 61.6 30 90.0
RcHm_v2.0_Chr2g0131551 Rosa chinensis HOM05D003847 ORTHO05D025737 6.2e-07 59.7 45 62.2
HanXRQChr04g0097131 Helianthus annuus HOM05D009775 ORTHO05D219867 4.0e-06 57.0 65 46.2


User provided reference genes

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