Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_15425 Corylus avellana HOM05D007434 ORTHO05D009541 1.2e-39 166.0 79 100.0
QL06p042177 Quercus lobata HOM05D007434 ORTHO05D009541 1.3e-17 92.8 71 63.4
CiPaw.02G009300 Carya illinoinensis HOM05D007434 ORTHO05D009541 4.8e-17 90.9 74 66.2
CiPaw.01G021200 Carya illinoinensis HOM05D007434 ORTHO05D009541 9.0e-16 86.7 69 66.7
Dinv29971 Davidia involucrata HOM05D008581 ORTHO05D009541 1.0e-11 73.2 72 54.2
Actinidia12058 Actinidia chinensis HOM05D007434 ORTHO05D009541 1.9e-10 68.9 67 49.3
Potri.007G041500 Populus trichocarpa HOM05D007434 ORTHO05D009541 4.3e-10 67.8 72 55.6
Ciclev10027106m.g Citrus clementina HOM05D007434 ORTHO05D009541 1.6e-09 65.9 72 54.2
ClCG01G016730 Citrullus lanatus HOM05D007434 ORTHO05D009541 1.8e-08 62.4 77 46.8
Prupe.7G136000 Prunus persica HOM05D007434 ORTHO05D009541 3.1e-08 61.6 72 45.8
MELO3C007552.2 Cucumis melo HOM05D007434 ORTHO05D009541 4.0e-08 61.2 72 50.0
CsaV3_6G043150 Cucumis sativus L. HOM05D007434 ORTHO05D009541 1.2e-07 59.7 72 48.6
Nn1g05850 Nelumbo nucifera HOM05D007434 ORTHO05D009541 1.5e-07 59.3 72 41.7
Nn5g30204 Nelumbo nucifera HOM05D007434 ORTHO05D009541 1.5e-07 59.3 80 42.5
Sed0003827 Sechium edule HOM05D007434 ORTHO05D009541 2.6e-07 58.5 74 45.9
Lj2g0026149 Lotus japonicus HOM05D007434 ORTHO05D009541 3.4e-07 58.2 63 54.0
Medtr5g017710 Medicago truncatula HOM05D007434 ORTHO05D009541 1.3e-06 56.2 57 49.1
Glyma.11G057300 Glycine max HOM05D007434 ORTHO05D009541 1.7e-06 55.8 74 44.6
Glyma.01G184900 Glycine max HOM05D007434 ORTHO05D009541 2.2e-06 55.5 43 67.4
Lj2g0001941 Lotus japonicus HOM05D007434 ORTHO05D009541 2.9e-06 55.1 62 45.2
TPR.G21269 Trifolium pratense HOM05D007434 ORTHO05D009541 2.9e-06 55.1 51 52.9
FvH4_1g15740 Fragaria vesca HOM05D007434 ORTHO05D009541 4.9e-06 54.3 76 44.7
FAN28G0198 Fragaria x ananassa HOM05D007434 ORTHO05D009541 4.9e-06 54.3 76 50.0
Lalb_Chr05g0213231 Lupinus albus HOM05D007434 ORTHO05D009541 4.9e-06 54.3 51 58.8
Phvul.002G020200 Phaseolus vulgaris HOM05D007434 ORTHO05D009541 4.9e-06 54.3 66 45.5
Lalb_Chr09g0323081 Lupinus albus HOM05D007434 ORTHO05D009541 6.4e-06 53.9 57 56.1
Manes.12G100300 Manihot esculenta HOM05D007434 ORTHO05D009541 6.4e-06 53.9 75 41.3
Manes.13G126300 Manihot esculenta HOM05D007434 ORTHO05D009541 8.4e-06 53.5 75 41.3


User provided reference genes

Program Settings