Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_15401 Corylus avellana HOM05D005490 ORTHO05D006606 2.0e-193 679.1 381 100.0
Haze_15403 Corylus avellana HOM05D005490 ORTHO05D006606 8.3e-176 620.5 354 99.2
Cfa004023 Carpinus fangiana HOM05D005490 ORTHO05D006606 2.0e-108 396.7 236 97.0
CiPaw.01G018200 Carya illinoinensis HOM05D005490 ORTHO05D006606 2.0e-97 360.1 237 85.2
Ciclev10025320m.g Citrus clementina HOM05D005490 ORTHO05D006606 6.8e-93 345.1 252 79.4
Manes.12G106800 Manihot esculenta HOM05D005490 ORTHO05D006606 5.7e-92 342.0 236 82.2
QL06p041379 Quercus lobata HOM05D005490 ORTHO05D006606 1.4e-90 337.4 269 76.2
TWI09G1398 Tripterygium wilfordii HOM05D005490 ORTHO05D006606 9.1e-90 334.7 236 80.5
Dinv29986 Davidia involucrata HOM05D005490 ORTHO05D006606 2.7e-89 333.2 250 76.4
FAN28G1226 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.7e-88 330.5 315 67.3
Dinv39848 Davidia involucrata HOM05D005490 ORTHO05D006606 1.9e-87 327.0 250 77.6
Thecc.01G056300 Theobroma cacao HOM05D005490 ORTHO05D006606 4.7e-86 322.4 236 81.4
Peaxi162Scf00450g00420 Petunia axillaris HOM05D005490 ORTHO05D006606 6.1e-86 322.0 253 72.3
Oeu031525.2 Olea europaea HOM05D005490 ORTHO05D006606 2.3e-85 320.1 315 67.0
Gohir.D11G199100 Gossypium hirsutum HOM05D005490 ORTHO05D006606 3.0e-85 319.7 236 77.1
Cc07_g05990 Coffea canephora HOM05D005490 ORTHO05D006606 1.2e-84 317.8 236 79.7
GSVIVG01022130001 Vitis vinifera HOM05D005490 ORTHO05D006606 2.6e-84 316.6 252 79.8
Lj7A69T47 Lonicera japonica HOM05D005490 ORTHO05D006606 1.3e-83 314.3 288 66.3
Potri.007G044100 Populus trichocarpa HOM05D005490 ORTHO05D006606 1.7e-83 313.9 236 76.3
Duzib187G0068 Durio zibethinus HOM05D005490 ORTHO05D006606 3.1e-82 309.7 265 70.9
ClCG02G012530 Citrullus lanatus HOM05D005490 ORTHO05D006606 7.7e-81 305.1 252 74.2
FAN19G0012 Fragaria x ananassa HOM05D005490 ORTHO05D006606 3.8e-80 302.8 234 75.6
Nitab4.5_0002016g0110 Nicotiana tabacum HOM05D005490 ORTHO05D006606 8.6e-80 301.6 236 71.2
RcHm_v2.0_Chr2g0105671 Rosa chinensis HOM05D005490 ORTHO05D006606 8.6e-80 301.6 252 73.8
Prupe.7G133300 Prunus persica HOM05D005490 ORTHO05D006606 1.5e-79 300.8 234 73.5
Psat2g166360 Pisum sativum HOM05D005490 ORTHO05D006606 3.3e-79 299.7 254 72.4
Lj2g0003149 Lotus japonicus HOM05D005490 ORTHO05D006606 5.5e-79 298.9 235 73.2
FvH4_1g16060 Fragaria vesca HOM05D005490 ORTHO05D006606 7.2e-79 298.5 234 74.8
Eucgr.I00926 Eucalyptus grandis HOM05D005490 ORTHO05D006606 9.5e-79 298.1 252 75.8
DCAR_025733 Daucus carota HOM05D005490 ORTHO05D006606 1.2e-78 297.7 259 66.8
Sed0007368 Sechium edule HOM05D005490 ORTHO05D006606 4.7e-78 295.8 236 75.8
Actinidia03792 Actinidia chinensis HOM05D005490 ORTHO05D006606 1.0e-77 294.7 250 72.8
vmacro17955 Vaccinium macrocarpon HOM05D005490 ORTHO05D006606 1.8e-77 293.9 345 60.6
Nn5g30300 Nelumbo nucifera HOM05D005490 ORTHO05D006606 4.0e-77 292.7 252 71.4
Phvul.002G018900 Phaseolus vulgaris HOM05D005490 ORTHO05D006606 2.6e-76 290.0 252 69.8
Hma1.2p1_0461F.1_g157800 Hydrangea macrophylla HOM05D005490 ORTHO05D006606 3.4e-76 289.7 250 74.0
Glyma.01G186000 Glycine max HOM05D005490 ORTHO05D006606 9.8e-76 288.1 253 68.4
Sc03g0001580 Simmondsia chinensis HOM05D005490 ORTHO05D006606 9.8e-76 288.1 234 77.4
Sabra05G0112300 Salix brachista HOM05D005490 ORTHO05D006606 1.7e-75 287.3 254 69.3
VMungo1215G3252 Vigna mungo HOM05D005490 ORTHO05D006606 2.2e-75 287.0 252 72.2
CSS0049924 Camellia sinensis var. sinensis HOM05D005490 ORTHO05D006606 1.8e-74 283.9 311 61.7
arahy.Tifrunner.gnm1.ann1.JF37M9 Arachis hypogaea HOM05D005490 ORTHO05D006606 3.2e-74 283.1 236 74.6
TPR.G30705 Trifolium pratense HOM05D005490 ORTHO05D006606 5.4e-74 282.3 254 72.8
Gohir.A02G157300 Gossypium hirsutum HOM05D005490 ORTHO05D006606 7.0e-74 282.0 237 72.2
Gohir.A11G192400 Gossypium hirsutum HOM05D005490 ORTHO05D006606 1.2e-73 281.2 234 69.7
Gorai.007G213300 Gossypium raimondii HOM05D005490 ORTHO05D006606 2.0e-73 280.4 234 70.1
Oeu062437.1 Olea europaea HOM05D005490 ORTHO05D006606 3.5e-73 279.6 234 68.8
Lsat_1_v5_gn_2_84101 Lactuca sativa HOM05D005490 ORTHO05D006606 1.0e-72 278.1 309 59.9
Lalb_Chr05g0213291 Lupinus albus HOM05D005490 ORTHO05D006606 1.3e-72 277.7 238 70.6
Migut.H00433 Erythranthe guttata HOM05D005490 ORTHO05D006606 1.1e-71 274.6 234 71.8
EL10Ac6g15745 Beta vulgaris HOM05D005490 ORTHO05D006606 1.5e-71 274.2 252 71.0
Sp7g34780 Schrenkiella parvula HOM05D005490 ORTHO05D006606 1.5e-71 274.2 250 66.8
Sabra07G0038800 Salix brachista HOM05D005490 ORTHO05D006606 4.3e-71 272.7 200 75.5
Glyma.11G056000 Glycine max HOM05D005490 ORTHO05D006606 3.6e-70 269.6 253 68.4
Atru.chr3.327 Acer truncatum HOM05D005490 ORTHO05D006606 6.1e-70 268.9 200 76.0
COL.COLO4_11415 Corchorus olitorius HOM05D005490 ORTHO05D006606 1.0e-69 268.1 195 77.4
CsaV3_2G016660 Cucumis sativus L. HOM05D005490 ORTHO05D006606 4.0e-69 266.2 201 77.1
Aa31LG6G13990 Aethionema arabicum HOM05D005490 ORTHO05D006606 8.9e-69 265.0 269 63.6
MELO3C020875.2 Cucumis melo HOM05D005490 ORTHO05D006606 8.9e-69 265.0 201 78.1
THA.LOC104804216 Tarenaya hassleriana HOM05D005490 ORTHO05D006606 1.5e-68 264.2 235 72.3
HanXRQChr14g0442791 Helianthus annuus HOM05D005490 ORTHO05D006606 2.0e-68 263.8 251 71.3
Thhalv10025018m.g Eutrema salsugineum HOM05D005490 ORTHO05D006606 5.8e-68 262.3 236 69.5
A01p01850 Brassica napus HOM05D005490 ORTHO05D006606 7.5e-68 261.9 233 69.5
BraA01t00174Z Brassica rapa HOM05D005490 ORTHO05D006606 7.5e-68 261.9 233 69.5
Ca_24770_v3 Cicer arietinum L. HOM05D005490 ORTHO05D006606 9.8e-68 261.5 315 60.6
Gorai.003G025100 Gossypium raimondii HOM05D005490 ORTHO05D006606 9.8e-68 261.5 234 70.5
Medtr5g017430 Medicago truncatula HOM05D005490 ORTHO05D006606 1.7e-67 260.8 234 70.1
Hma1.2p1_0461F.1_g157810 Hydrangea macrophylla HOM05D005490 ORTHO05D006606 2.9e-67 260.0 250 68.0
C01p01990 Brassica napus HOM05D005490 ORTHO05D006606 3.7e-67 259.6 233 66.1
BolC1t00193H Brassica oleracea HOM05D005490 ORTHO05D006606 3.7e-67 259.6 233 66.1
CANSAT01G1717 Cannabis sativa HOM05D005490 ORTHO05D006606 4.1e-66 256.1 200 73.0
Carub.0007s0317 Capsella rubella HOM05D005490 ORTHO05D006606 4.1e-66 256.1 234 67.1
MD15G1284300 Malus domestica HOM05D005490 ORTHO05D006606 4.1e-66 256.1 215 68.8
Nitab4.5_0002440g0010 Nicotiana tabacum HOM05D005490 ORTHO05D006606 5.4e-66 255.8 213 69.0
AUR62001928 Chenopodium quinoa HOM05D005490 ORTHO05D006606 2.7e-65 253.4 265 65.7
PSO210G6251 Papaver somniferum HOM05D005490 ORTHO05D006606 3.5e-65 253.1 200 70.5
Hund16323 Selenicereus undatus HOM05D005490 ORTHO05D006606 6.0e-65 252.3 228 72.8
CDE08G0045 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 1.3e-64 251.1 248 62.5
arahy.Tifrunner.gnm1.ann1.5GG3L5 Arachis hypogaea HOM05D005490 ORTHO05D006606 1.7e-64 250.8 347 55.6
PSO170G3823 Papaver somniferum HOM05D005490 ORTHO05D006606 2.3e-64 250.4 200 70.0
Gohir.D03G023600 Gossypium hirsutum HOM05D005490 ORTHO05D006606 3.0e-64 250.0 200 76.0
Solyc02g090850.3 Solanum lycopersicum HOM05D005490 ORTHO05D006606 3.0e-64 250.0 200 68.0
CAN.G660.7 Capsicum annuum HOM05D005490 ORTHO05D006606 3.9e-64 249.6 203 68.0
PGSC0003DMG400004042 Solanum tuberosum HOM05D005490 ORTHO05D006606 5.0e-64 249.2 200 68.0
AL7G13750 Arabidopsis lyrata HOM05D005490 ORTHO05D006606 2.1e-62 243.8 234 64.5
AT4G36980 Arabidopsis thaliana HOM05D005490 ORTHO05D006606 2.6e-60 236.9 252 63.9
HPP92_004114 Vanilla planifolia HOM05D005490 ORTHO05D006606 7.1e-58 228.8 235 60.0
CARHR245520 Cardamine hirsuta HOM05D005490 ORTHO05D006606 1.6e-57 227.6 250 61.2
CDE06G1923 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 5.1e-56 222.6 217 62.7
AUR62003882 Chenopodium quinoa HOM05D005490 ORTHO05D006606 5.6e-55 219.2 228 64.9
ECA238G0711 Erigeron canadensis HOM05D005490 ORTHO05D006606 9.5e-55 218.4 234 62.0
Rhsim08G0100400 Rhododendron simsii HOM05D005490 ORTHO05D006606 1.2e-52 211.5 213 66.2
BcaNung02520 Brassica carinata HOM05D005490 ORTHO05D006606 3.4e-52 209.9 212 61.3
Zm00001eb019290 Zea mays HOM05D005490 ORTHO05D006606 9.9e-52 208.4 232 61.2
Ah.03g145080 Amaranthus hybridus HOM05D005490 ORTHO05D006606 4.1e-50 203.0 198 67.2
SGA_v2.0_scaffold15G07303 Striga asiatica HOM05D005490 ORTHO05D006606 6.6e-48 195.7 199 62.3
ATR1102G026 Amborella trichopoda HOM05D005490 ORTHO05D006606 5.6e-47 192.6 252 58.3
HPP92_004074 Vanilla planifolia HOM05D005490 ORTHO05D006606 7.3e-47 192.2 220 56.4
Os03g0395900 Oryza sativa ssp. japonica HOM05D005490 ORTHO05D006606 4.7e-46 189.5 198 62.6
CSS0031445 Camellia sinensis var. sinensis HOM05D005490 ORTHO05D006606 6.8e-45 185.7 218 59.2
Actinidia16483 Actinidia chinensis HOM05D005490 ORTHO05D006606 2.0e-44 184.1 313 46.6
SEGI_41077 Sequoiadendron giganteum HOM05D005490 ORTHO05D006606 9.9e-44 181.8 242 52.1
Potri.005G138200 Populus trichocarpa HOM05D005490 ORTHO05D006606 1.0e-40 171.8 125 72.8
MD02G1172000 Malus domestica HOM05D005490 ORTHO05D006606 2.5e-39 167.2 125 73.6
MD02G1172100 Malus domestica HOM05D005490 ORTHO05D006606 6.2e-38 162.5 128 80.5
Sopen02g035470 Solanum pennellii HOM05D005490 ORTHO05D006606 3.1e-37 160.2 125 66.4
TAR381G1106 Trochodendron aralioides HOM05D005490 ORTHO05D006606 6.4e-35 152.5 125 75.2
FAN26G0668 Fragaria x ananassa HOM05D005490 ORTHO05D006606 8.4e-35 152.1 125 69.6
Aqoxy5G01229 Aquilegia oxysepala HOM05D005490 ORTHO05D006606 9.3e-34 148.7 125 66.4
Aqoxy5G01228 Aquilegia oxysepala HOM05D005490 ORTHO05D006606 9.6e-31 138.7 114 70.2
CBR_g38045 Chara braunii HOM05D005490 ORTHO05D000004 1.4e-29 134.8 302 39.4
Actinidia36493 Actinidia chinensis HOM05D005490 ORTHO05D006606 4.2e-26 123.2 114 70.2
FAN23G2111 Fragaria x ananassa HOM05D005490 ORTHO05D006606 7.9e-25 119.0 128 60.9
Mapoly0012s0107 Marchantia polymorpha HOM05D005490 ORTHO05D006606 9.0e-21 105.5 218 43.6
TAR381G1012 Trochodendron aralioides HOM05D005490 ORTHO05D006606 2.6e-20 104.0 94 73.4
unitig_899.g14662 Utricularia gibba HOM05D005490 ORTHO05D006606 4.9e-19 99.8 123 62.6
Actinidia36494 Actinidia chinensis HOM05D005490 ORTHO05D006606 2.7e-17 94.0 79 72.2
Pp3c7_5520 Physcomitrium patens HOM05D005490 ORTHO05D006606 2.3e-16 90.9 263 37.3
AagrBONN_evm.TU.Sc2ySwM_344.4468 Anthoceros agrestis HOM05D005490 ORTHO05D006606 4.3e-15 86.7 224 42.4
CDE08G1038 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 9.6e-15 85.5 87 51.7
Pp3c11_20900 Physcomitrium patens HOM05D005490 ORTHO05D006606 4.6e-09 66.6 260 32.7
Actinidia12052 Actinidia chinensis HOM05D005490 ORTHO05D006606 1.5e-07 61.6 190 33.7
ECA233G0248 Erigeron canadensis HOM05D000047 ORTHO05D006606 3.3e-07 60.5 142 38.7


User provided reference genes

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