Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_15300 Corylus avellana HOM05D007381 ORTHO05D009496 1.8e-226 788.9 389 100.0
Cfa004113 Carpinus fangiana HOM05D007381 ORTHO05D009496 1.3e-168 596.7 316 94.6
MELO3C007622.2 Cucumis melo HOM05D007381 ORTHO05D009496 8.6e-136 487.6 330 76.1
Sed0015462 Sechium edule HOM05D007381 ORTHO05D009496 1.5e-135 486.9 313 78.3
Prupe.6G222900 Prunus persica HOM05D007381 ORTHO05D009496 1.6e-134 483.4 292 82.5
MD00G1015500 Malus domestica HOM05D007381 ORTHO05D009496 6.2e-134 481.5 292 81.8
MD15G1294900 Malus domestica HOM05D007381 ORTHO05D009496 6.2e-134 481.5 292 82.2
VMungo1215G2498 Vigna mungo HOM05D007381 ORTHO05D009496 8.0e-134 481.1 342 71.9
CsaV3_6G043990 Cucumis sativus L. HOM05D007381 ORTHO05D009496 1.5e-132 476.9 313 77.6
Medtr5g015840 Medicago truncatula HOM05D007381 ORTHO05D009496 1.5e-132 476.9 292 80.8
TPR.G20964 Trifolium pratense HOM05D007381 ORTHO05D009496 2.6e-132 476.1 303 77.2
arahy.Tifrunner.gnm1.ann1.S5EEEI Arachis hypogaea HOM05D007381 ORTHO05D009496 5.8e-132 474.9 299 79.6
Glyma.11G048900 Glycine max HOM05D007381 ORTHO05D009496 5.8e-132 474.9 292 81.5
Dinv26914 Davidia involucrata HOM05D007381 ORTHO05D009496 2.2e-131 473.0 293 81.2
Dinv30077 Davidia involucrata HOM05D007381 ORTHO05D009496 4.9e-131 471.9 314 77.7
Glyma.01G192900 Glycine max HOM05D007381 ORTHO05D009496 4.9e-131 471.9 292 80.5
Phvul.002G012100 Phaseolus vulgaris HOM05D007381 ORTHO05D009496 6.4e-131 471.5 292 81.2
TAR628G1049 Trochodendron aralioides HOM05D007381 ORTHO05D009496 6.4e-131 471.5 314 76.8
Lalb_Chr05g0213621 Lupinus albus HOM05D007381 ORTHO05D009496 8.3e-131 471.1 296 79.1
arahy.Tifrunner.gnm1.ann1.I4PWFV Arachis hypogaea HOM05D007381 ORTHO05D009496 1.4e-130 470.3 299 78.9
Ca_24708_v3 Cicer arietinum L. HOM05D007381 ORTHO05D009496 1.4e-130 470.3 292 79.5
Lj2g0010288 Lotus japonicus HOM05D007381 ORTHO05D009496 1.9e-130 469.9 292 80.1
CANSAT01G2210 Cannabis sativa HOM05D007381 ORTHO05D009496 7.1e-130 468.0 313 77.0
RcHm_v2.0_Chr2g0107591 Rosa chinensis HOM05D007381 ORTHO05D009496 9.2e-130 467.6 292 79.1
FvH4_1g17400 Fragaria vesca HOM05D007381 ORTHO05D009496 2.1e-129 466.5 292 78.8
FAN19G2977 Fragaria x ananassa HOM05D007381 ORTHO05D009496 1.0e-128 464.2 281 80.4
FAN23G1987 Fragaria x ananassa HOM05D007381 ORTHO05D009496 1.7e-128 463.4 292 78.1
GSVIVG01000134001 Vitis vinifera HOM05D007381 ORTHO05D009496 2.3e-128 463.0 293 79.9
Atru.chr3.157 Acer truncatum HOM05D007381 ORTHO05D009496 3.9e-128 462.2 293 78.2
Atru.chr3.186 Acer truncatum HOM05D007381 ORTHO05D009496 3.9e-128 462.2 293 78.2
Eucgr.H02297 Eucalyptus grandis HOM05D007381 ORTHO05D009496 1.5e-127 460.3 293 78.8
PGR102G2572 Punica granatum HOM05D007381 ORTHO05D009496 1.5e-127 460.3 293 79.5
COL.COLO4_11553 Corchorus olitorius HOM05D007381 ORTHO05D009496 1.9e-127 459.9 293 78.5
FAN28G2520 Fragaria x ananassa HOM05D007381 ORTHO05D009496 2.5e-127 459.5 281 79.4
FAN26G1164 Fragaria x ananassa HOM05D007381 ORTHO05D009496 5.6e-127 458.4 281 79.4
Cpa.g.sc6.38 Carica papaya HOM05D007381 ORTHO05D009496 7.3e-127 458.0 293 79.2
ClCG01G017450 Citrullus lanatus HOM05D007381 ORTHO05D009496 9.5e-127 457.6 390 63.8
PSO170G6067 Papaver somniferum HOM05D007381 ORTHO05D009496 9.5e-127 457.6 293 77.1
Thecc.01G070300 Theobroma cacao HOM05D007381 ORTHO05D009496 2.8e-126 456.1 293 77.5
Aqoxy5G00892 Aquilegia oxysepala HOM05D007381 ORTHO05D009496 8.1e-126 454.5 314 73.2
Nn1g04598 Nelumbo nucifera HOM05D007381 ORTHO05D009496 1.4e-125 453.8 314 74.2
ECA232G2614 Erigeron canadensis HOM05D007381 ORTHO05D009496 2.3e-125 453.0 293 76.5
Gorai.011G107900 Gossypium raimondii HOM05D007381 ORTHO05D009496 2.3e-125 453.0 293 77.1
CSS0029250 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 3.1e-125 452.6 293 78.5
CSS0037700 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 3.1e-125 452.6 277 81.6
Gohir.A10G089900 Gossypium hirsutum HOM05D007381 ORTHO05D009496 5.2e-125 451.8 293 76.8
HanXRQChr12g0373171 Helianthus annuus HOM05D007381 ORTHO05D009496 5.2e-125 451.8 314 72.0
Lalb_Chr16g0378811 Lupinus albus HOM05D007381 ORTHO05D009496 6.8e-125 451.4 292 76.7
Gohir.D10G098200 Gossypium hirsutum HOM05D007381 ORTHO05D009496 8.9e-125 451.1 293 76.8
Potri.007G053900 Populus trichocarpa HOM05D007381 ORTHO05D009496 1.2e-124 450.7 314 72.9
Actinidia16435 Actinidia chinensis HOM05D007381 ORTHO05D009496 2.6e-124 449.5 293 78.2
Lsat_1_v5_gn_4_160940 Lactuca sativa HOM05D007381 ORTHO05D009496 1.7e-123 446.8 314 71.3
Rhsim08G0094800 Rhododendron simsii HOM05D007381 ORTHO05D009496 1.7e-123 446.8 293 76.8
SGA_v2.0_scaffold15G07431 Striga asiatica HOM05D007381 ORTHO05D009496 2.2e-123 446.4 334 66.2
Manes.12G110400 Manihot esculenta HOM05D007381 ORTHO05D009496 2.9e-123 446.0 313 72.5
THA.LOC104819874 Tarenaya hassleriana HOM05D007381 ORTHO05D009496 4.9e-123 445.3 294 74.8
Cc07_g06930 Coffea canephora HOM05D007381 ORTHO05D009496 1.2e-121 440.7 293 74.4
Peaxi162Scf00264g00118 Petunia axillaris HOM05D007381 ORTHO05D009496 1.6e-121 440.3 314 70.7
Migut.H00360 Erythranthe guttata HOM05D007381 ORTHO05D009496 1.0e-120 437.6 314 69.7
Lj4A160G63 Lonicera japonica HOM05D007381 ORTHO05D009496 1.7e-120 436.8 311 71.1
EL10Ac6g15638 Beta vulgaris HOM05D007381 ORTHO05D009496 2.5e-119 433.0 314 68.2
Sabra07G0047100 Salix brachista HOM05D007381 ORTHO05D009496 2.5e-119 433.0 298 73.5
Zm00001eb108230 Zea mays HOM05D007381 ORTHO05D009496 1.2e-118 430.6 282 73.8
Sopen02g037070 Solanum pennellii HOM05D007381 ORTHO05D009496 1.6e-118 430.3 314 69.1
PGSC0003DMG400024934 Solanum tuberosum HOM05D007381 ORTHO05D009496 1.6e-118 430.3 314 68.8
Aa31LG6G14440 Aethionema arabicum HOM05D007381 ORTHO05D009496 2.1e-118 429.9 282 74.1
Os07g0588800 Oryza sativa ssp. japonica HOM05D007381 ORTHO05D009496 2.1e-118 429.9 282 73.8
SEGI_03968 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 4.7e-118 428.7 293 72.0
Ciclev10025991m.g Citrus clementina HOM05D007381 ORTHO05D009496 6.2e-118 428.3 274 78.1
vmacro17999 Vaccinium macrocarpon HOM05D007381 ORTHO05D009496 1.4e-117 427.2 348 64.9
CDE07G0114 Ceratophyllum demersum HOM05D007381 ORTHO05D009496 2.4e-117 426.4 293 70.6
Solyc02g092510.3 Solanum lycopersicum HOM05D007381 ORTHO05D009496 1.2e-116 424.1 314 68.2
Oeu040581.2 Olea europaea HOM05D007381 ORTHO05D009496 2.0e-116 423.3 370 59.7
CAN.G1075.23 Capsicum annuum HOM05D007381 ORTHO05D009496 3.4e-116 422.5 314 68.2
ATR0019G019 Amborella trichopoda HOM05D007381 ORTHO05D009496 1.7e-115 420.2 293 70.6
Nitab4.5_0000651g0120 Nicotiana tabacum HOM05D007381 ORTHO05D009496 3.8e-115 419.1 309 68.0
Nitab4.5_0006069g0020 Nicotiana tabacum HOM05D007381 ORTHO05D009496 3.5e-113 412.5 312 66.3
unitig_899.g14582 Utricularia gibba HOM05D007381 ORTHO05D009496 4.0e-109 399.1 282 68.1
TWI73G0080 Tripterygium wilfordii HOM05D007381 ORTHO05D009496 3.8e-107 392.5 318 65.4
CiPaw.01G006100 Carya illinoinensis HOM05D007381 ORTHO05D009496 6.6e-104 381.7 229 83.0
Pp3c18_1320 Physcomitrium patens HOM05D007381 ORTHO05D009496 1.9e-103 380.2 303 63.0
DCAR_021466 Daucus carota HOM05D007381 ORTHO05D009496 1.3e-102 377.5 293 65.2
SMO268G0024 Selaginella moellendorffii HOM05D007381 ORTHO05D009496 1.5e-100 370.5 279 65.2
AagrBONN_evm.TU.Sc2ySwM_362.1621 Anthoceros agrestis HOM05D007381 ORTHO05D009496 2.9e-99 366.3 293 62.1
Hma1.2p1_0730F.1_g209840 Hydrangea macrophylla HOM05D007381 ORTHO05D009496 1.6e-97 360.5 235 77.9
Mapoly0084s0082 Marchantia polymorpha HOM05D007381 ORTHO05D009496 6.5e-91 338.6 291 57.4
SEGI_30700 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 4.8e-86 322.4 214 73.8
Duzib187G0033 Durio zibethinus HOM05D007381 ORTHO05D009496 3.4e-84 316.2 294 59.5
Hund13939 Selenicereus undatus HOM05D007381 ORTHO05D009496 1.0e-75 288.1 247 61.9
HPP92_026572 Vanilla planifolia HOM05D007381 ORTHO05D009496 6.1e-73 278.9 196 68.9
Cre07.g344150 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D009496 4.3e-71 272.7 288 49.3
QL06p039803 Quercus lobata HOM05D007381 ORTHO05D009496 6.3e-62 242.3 142 81.7
CSS0032842 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 1.7e-54 217.6 168 67.9
MCO12G353 Micromonas commoda HOM05D007381 ORTHO05D009496 1.7e-54 217.6 282 44.0
PRCOL_00002255 Prasinoderma coloniale HOM05D007381 ORTHO05D009496 1.6e-49 201.1 252 44.0
CBR_g40647 Chara braunii HOM05D007381 ORTHO05D009496 3.8e-43 179.9 157 56.7
ATR0019G012 Amborella trichopoda HOM05D007381 ORTHO05D009496 6.1e-41 172.6 108 75.0
Ca_17124_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 6.2e-25 119.4 85 72.9
SHI33146 Sapria himalayana HOM05D007381 ORTHO05D009496 1.2e-23 115.2 76 64.5
Cfa025505 Carpinus fangiana HOM05D007381 ORTHO05D009496 3.2e-21 107.1 221 33.0
Ca_08895_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 4.6e-20 103.2 69 73.9
CBR_g29716 Chara braunii HOM05D007381 ORTHO05D009496 1.1e-16 92.0 108 42.6
COL.COLO4_34115 Corchorus olitorius HOM05D007381 ORTHO05D159467 8.1e-09 65.9 39 79.5
Rhsim08G0136300 Rhododendron simsii HOM05D007381 ORTHO05D006450 8.9e-08 62.4 56 62.5
GSVIVG01000139001 Vitis vinifera HOM05D007381 ORTHO05D439818 8.4e-06 55.8 76 44.7


User provided reference genes

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