Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_15083 Corylus avellana HOM05D004733 ORTHO05D005925 2.3e-60 235.3 115 100.0
Cfa004311 Carpinus fangiana HOM05D004733 ORTHO05D005925 2.1e-34 149.1 95 81.1
MD02G1146900 Malus domestica HOM05D004733 ORTHO05D005925 4.5e-32 141.4 106 67.9
Actinidia36563 Actinidia chinensis HOM05D004733 ORTHO05D005925 1.3e-31 139.8 106 66.0
Potri.007G024600 Populus trichocarpa HOM05D004733 ORTHO05D005925 4.2e-30 134.8 106 62.3
CiPaw.02G018200 Carya illinoinensis HOM05D004733 ORTHO05D005925 5.5e-30 134.4 96 71.9
CSS0026274 Camellia sinensis var. sinensis HOM05D004733 ORTHO05D005925 1.2e-29 133.3 108 62.0
Prupe.7G155300 Prunus persica HOM05D004733 ORTHO05D005925 1.2e-29 133.3 106 65.1
Sabra07G0021700 Salix brachista HOM05D004733 ORTHO05D005925 1.6e-29 132.9 106 61.3
QL04p047829 Quercus lobata HOM05D004733 ORTHO05D005925 2.1e-29 132.5 100 68.0
Manes.02G094400 Manihot esculenta HOM05D004733 ORTHO05D005925 3.5e-29 131.7 106 62.3
vmacro15553 Vaccinium macrocarpon HOM05D004733 ORTHO05D005925 4.6e-29 131.3 106 61.3
Rhsim02G0060300 Rhododendron simsii HOM05D004733 ORTHO05D005925 1.3e-28 129.8 106 61.3
Duzib187G1802 Durio zibethinus HOM05D004733 ORTHO05D005925 1.8e-28 129.4 106 61.3
TWI77G0475 Tripterygium wilfordii HOM05D004733 ORTHO05D005925 1.8e-28 129.4 102 63.7
PGR119G1063 Punica granatum HOM05D004733 ORTHO05D005925 2.3e-28 129.0 106 62.3
Hma1.2p1_0789F.1_g218380 Hydrangea macrophylla HOM05D004733 ORTHO05D005925 3.9e-28 128.3 100 65.0
COL.COLO4_08906 Corchorus olitorius HOM05D004733 ORTHO05D005925 5.1e-28 127.9 106 60.4
TAR625G0290 Trochodendron aralioides HOM05D004733 ORTHO05D005925 5.1e-28 127.9 99 65.7
Gohir.A11G184100 Gossypium hirsutum HOM05D004733 ORTHO05D005925 8.7e-28 127.1 106 63.2
QL06p046242 Quercus lobata HOM05D004733 ORTHO05D005925 1.1e-27 126.7 102 65.7
Hma1.2p1_0789F.1_g218390 Hydrangea macrophylla HOM05D004733 ORTHO05D005925 1.5e-27 126.3 97 66.0
RcHm_v2.0_Chr2g0101431 Rosa chinensis HOM05D004733 ORTHO05D005925 1.5e-27 126.3 106 62.3
Atru.chr3.583 Acer truncatum HOM05D004733 ORTHO05D005925 1.9e-27 125.9 103 62.1
GSVIVG01018952001 Vitis vinifera HOM05D004733 ORTHO05D005925 1.9e-27 125.9 106 60.4
Thecc.01G034700 Theobroma cacao HOM05D004733 ORTHO05D005925 3.3e-27 125.2 106 59.4
Gohir.D11G190600 Gossypium hirsutum HOM05D004733 ORTHO05D005925 4.3e-27 124.8 106 61.3
FAN28G2014 Fragaria x ananassa HOM05D004733 ORTHO05D005925 9.6e-27 123.6 106 61.3
ClCG06G002580 Citrullus lanatus HOM05D004733 ORTHO05D005925 2.1e-26 122.5 106 59.4
FAN19G0915 Fragaria x ananassa HOM05D004733 ORTHO05D005925 2.8e-26 122.1 106 61.3
Sed0013525 Sechium edule HOM05D004733 ORTHO05D005925 3.7e-26 121.7 106 60.4
Cpa.g.sc6.117 Carica papaya HOM05D004733 ORTHO05D005925 4.8e-26 121.3 107 59.8
DCAR_017293 Daucus carota HOM05D004733 ORTHO05D005925 4.8e-26 121.3 106 59.4
Gorai.007G203100 Gossypium raimondii HOM05D004733 ORTHO05D005925 4.8e-26 121.3 106 60.4
Ciclev10024776m.g Citrus clementina HOM05D004733 ORTHO05D005925 1.4e-25 119.8 101 61.4
MELO3C022270.2 Cucumis melo HOM05D004733 ORTHO05D005925 2.4e-25 119.0 106 58.5
CsaV3_5G036970 Cucumis sativus L. HOM05D004733 ORTHO05D005925 3.1e-25 118.6 106 58.5
HanXRQChr09g0261511 Helianthus annuus HOM05D004733 ORTHO05D005925 3.1e-25 118.6 100 60.0
Peaxi162Scf00366g00125 Petunia axillaris HOM05D004733 ORTHO05D005925 4.1e-25 118.2 99 59.6
FvH4_1g13250 Fragaria vesca HOM05D004733 ORTHO05D005925 5.3e-25 117.9 106 60.4
Sc03g0003000 Simmondsia chinensis HOM05D004733 ORTHO05D005925 5.3e-25 117.9 101 57.4
Nitab4.5_0000178g0060 Nicotiana tabacum HOM05D004733 ORTHO05D005925 6.9e-25 117.5 99 59.6
Lj4A201T52 Lonicera japonica HOM05D004733 ORTHO05D005925 1.2e-24 116.7 96 59.4
Nitab4.5_0001385g0060 Nicotiana tabacum HOM05D004733 ORTHO05D005925 1.5e-24 116.3 99 58.6
Migut.H00986 Erythranthe guttata HOM05D004733 ORTHO05D005925 2.0e-24 115.9 99 58.6
Glyma.01G176400 Glycine max HOM05D004733 ORTHO05D005925 2.6e-24 115.5 107 59.8
SHI09115 Sapria himalayana HOM05D004733 ORTHO05D005925 2.6e-24 115.5 98 61.2
CsaV3_6G008550 Cucumis sativus L. HOM05D004733 ORTHO05D005925 3.4e-24 115.2 97 61.9
Lalb_Chr16g0377811 Lupinus albus HOM05D004733 ORTHO05D005925 3.4e-24 115.2 99 58.6
CANSAT78G0304 Cannabis sativa HOM05D004733 ORTHO05D005925 4.5e-24 114.8 97 59.8
MSTRG.23523 Avicennia marina HOM05D004733 ORTHO05D005925 5.9e-24 114.4 99 54.5
Psat2g159520 Pisum sativum HOM05D004733 ORTHO05D005925 7.6e-24 114.0 99 58.6
SalBow2G0826 Salvia bowleyana HOM05D004733 ORTHO05D005925 7.6e-24 114.0 99 55.6
Hund16432 Selenicereus undatus HOM05D004733 ORTHO05D005925 7.6e-24 114.0 97 57.7
Nn5g29624 Nelumbo nucifera HOM05D004733 ORTHO05D005925 1.3e-23 113.2 100 57.0
unitig_21.g20953 Utricularia gibba HOM05D004733 ORTHO05D005925 1.7e-23 112.8 103 53.4
Oeu017201.1 Olea europaea HOM05D004733 ORTHO05D005925 2.2e-23 112.5 99 56.6
Lsat_1_v5_gn_4_152020 Lactuca sativa HOM05D004733 ORTHO05D005925 2.9e-23 112.1 103 52.4
ECA232G2226 Erigeron canadensis HOM05D004733 ORTHO05D005925 5.0e-23 111.3 104 52.9
EL10Ac6g15557 Beta vulgaris HOM05D004733 ORTHO05D005925 6.5e-23 110.9 94 59.6
Lj1g0005862 Lotus japonicus HOM05D004733 ORTHO05D005925 1.1e-22 110.2 99 55.6
Phvul.002G030700 Phaseolus vulgaris HOM05D004733 ORTHO05D005925 1.4e-22 109.8 107 57.0
VMungo1215G0507 Vigna mungo HOM05D004733 ORTHO05D005925 1.9e-22 109.4 107 57.0
SGA_v2.0_scaffold54G19532 Striga asiatica HOM05D004733 ORTHO05D005925 4.2e-22 108.2 83 61.4
Cc03_g11520 Coffea canephora HOM05D004733 ORTHO05D005925 7.2e-22 107.5 100 55.0
Glyma.11G068600 Glycine max HOM05D004733 ORTHO05D005925 7.2e-22 107.5 107 56.1
Solyc02g085230.3 Solanum lycopersicum HOM05D004733 ORTHO05D005925 7.2e-22 107.5 99 55.6
Sopen02g029930 Solanum pennellii HOM05D004733 ORTHO05D005925 7.2e-22 107.5 99 55.6
arahy.Tifrunner.gnm1.ann1.VB3WEH Arachis hypogaea HOM05D004733 ORTHO05D005925 1.6e-21 106.3 103 54.4
arahy.Tifrunner.gnm1.ann1.VZ5KK1 Arachis hypogaea HOM05D004733 ORTHO05D005925 1.6e-21 106.3 103 54.4
Dinv39990 Davidia involucrata HOM05D004733 ORTHO05D005925 2.1e-21 105.9 84 66.7
arahy.Tifrunner.gnm1.ann1.6U5FTL Arachis hypogaea HOM05D004733 ORTHO05D005925 2.7e-21 105.5 103 53.4
AUR62004057 Chenopodium quinoa HOM05D004733 ORTHO05D005925 2.7e-21 105.5 94 56.4
AUR62007571 Chenopodium quinoa HOM05D004733 ORTHO05D005925 3.5e-21 105.1 94 56.4
Ca_24844_v3 Cicer arietinum L. HOM05D004733 ORTHO05D005925 3.5e-21 105.1 107 49.5
CAN.G358.91 Capsicum annuum HOM05D004733 ORTHO05D005925 4.6e-21 104.8 107 53.3
Aqoxy6G01122 Aquilegia oxysepala HOM05D004733 ORTHO05D005925 7.9e-21 104.0 97 56.7
arahy.Tifrunner.gnm1.ann1.VLQ9MW Arachis hypogaea HOM05D004733 ORTHO05D005925 1.0e-20 103.6 103 52.4
Ca_24849_v3 Cicer arietinum L. HOM05D004733 ORTHO05D005925 1.0e-20 103.6 103 51.5
Ah.03g140900 Amaranthus hybridus HOM05D004733 ORTHO05D005925 6.7e-20 100.9 94 52.1
PSO675G5282 Papaver somniferum HOM05D004733 ORTHO05D005925 1.5e-19 99.8 103 49.5
PSO541G3573 Papaver somniferum HOM05D004733 ORTHO05D005925 1.9e-19 99.4 103 49.5
THA.LOC104809497 Tarenaya hassleriana HOM05D004733 ORTHO05D005925 7.4e-19 97.4 108 48.1
Medtr5g020190 Medicago truncatula HOM05D004733 ORTHO05D005925 2.2e-18 95.9 99 51.5
arahy.Tifrunner.gnm1.ann1.T3TR42 Arachis hypogaea HOM05D004733 ORTHO05D005925 2.8e-18 95.5 103 50.5
Sp7g34280 Schrenkiella parvula HOM05D004733 ORTHO05D005925 2.8e-18 95.5 106 47.2
Actinidia12125 Actinidia chinensis HOM05D004733 ORTHO05D005925 4.8e-18 94.7 57 78.9
Carub.0002s0104 Capsella rubella HOM05D004733 ORTHO05D005925 1.1e-17 93.6 106 45.3
BcaC01g00457 Brassica carinata HOM05D004733 ORTHO05D005925 2.0e-16 89.4 106 45.3
C03p80050 Brassica napus HOM05D004733 ORTHO05D005925 2.0e-16 89.4 106 45.3
BolC3t20259H Brassica oleracea HOM05D004733 ORTHO05D005925 2.0e-16 89.4 106 45.3
AL2G11330 Arabidopsis lyrata HOM05D004733 ORTHO05D005925 2.6e-16 89.0 106 47.2
AT1G63810 Arabidopsis thaliana HOM05D004733 ORTHO05D005925 3.4e-16 88.6 107 48.6
CARHR047390 Cardamine hirsuta HOM05D004733 ORTHO05D005925 3.4e-16 88.6 105 44.8
Aa31LG3G3780 Aethionema arabicum HOM05D004733 ORTHO05D005925 4.5e-16 88.2 107 47.7
A08p22270 Brassica napus HOM05D004733 ORTHO05D005925 1.3e-15 86.7 106 44.3
Thhalv10024292m.g Eutrema salsugineum HOM05D004733 ORTHO05D005925 1.3e-15 86.7 106 43.4
BraA08t34186Z Brassica rapa HOM05D004733 ORTHO05D005925 1.7e-15 86.3 106 44.3
BcaNung05455 Brassica carinata HOM05D004733 ORTHO05D005925 8.5e-15 84.0 106 44.3
TPR.G8389 Trifolium pratense HOM05D004733 ORTHO05D005925 8.5e-15 84.0 54 70.4
HPP92_009474 Vanilla planifolia HOM05D004733 ORTHO05D005925 7.9e-13 77.4 99 41.4
SEGI_35015 Sequoiadendron giganteum HOM05D004733 ORTHO05D005925 1.0e-12 77.0 105 41.0
A05p29530 Brassica napus HOM05D004733 ORTHO05D005925 6.7e-12 74.3 92 42.4
C05p48270 Brassica napus HOM05D004733 ORTHO05D005925 6.7e-12 74.3 56 58.9
A05p29760 Brassica napus HOM05D004733 ORTHO05D005925 7.4e-11 70.9 54 59.3
CDE02G4373 Ceratophyllum demersum HOM05D004733 ORTHO05D005925 1.3e-10 70.1 105 38.1
FAN23G1660 Fragaria x ananassa HOM05D004733 ORTHO05D005925 2.2e-10 69.3 106 42.5
ATR0665G204 Amborella trichopoda HOM05D004733 ORTHO05D005925 3.7e-10 68.6 97 38.1
Pp3c6_25920 Physcomitrium patens HOM05D004733 ORTHO05D005925 9.1e-09 63.9 94 37.2
AagrBONN_evm.TU.Sc2ySwM_228.917 Anthoceros agrestis HOM05D004733 ORTHO05D005925 2.0e-08 62.8 93 36.6
Mapoly0060s0020 Marchantia polymorpha HOM05D004733 ORTHO05D005925 2.6e-08 62.4 96 39.6
MBI14_g08060_MAGBIO Magnolia biondii HOM05D004733 ORTHO05D005925 5.0e-07 58.2 103 35.0


User provided reference genes

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