Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_14996 Corylus avellana HOM05D004750 ORTHO05D006207 3.5e-118 428.3 219 100.0
Cfa002398 Carpinus fangiana HOM05D004750 ORTHO05D006207 1.4e-39 167.2 128 74.2
Haze_24596 Corylus avellana HOM05D004750 ORTHO05D006207 7.2e-39 164.9 138 69.6
Hma1.2p1_0273F.1_g109920 Hydrangea macrophylla HOM05D004750 ORTHO05D006207 7.9e-38 161.4 166 59.6
QL10p040832 Quercus lobata HOM05D004750 ORTHO05D006207 3.9e-37 159.1 110 76.4
Dinv34600 Davidia involucrata HOM05D004750 ORTHO05D006207 3.3e-36 156.0 128 68.8
Hma1.2p1_0273F.1_g109910 Hydrangea macrophylla HOM05D004750 ORTHO05D006207 3.3e-36 156.0 180 55.0
Atru.chr5.1643 Acer truncatum HOM05D004750 ORTHO05D006207 5.7e-36 155.2 128 68.0
CiPaw.03G261600 Carya illinoinensis HOM05D004750 ORTHO05D006207 5.7e-36 155.2 128 68.0
Oeu026229.2 Olea europaea HOM05D004750 ORTHO05D006207 2.2e-35 153.3 189 50.8
CSS0022255 Camellia sinensis var. sinensis HOM05D004750 ORTHO05D006207 3.7e-35 152.5 166 57.2
Ciclev10019537m.g Citrus clementina HOM05D004750 ORTHO05D006207 4.8e-35 152.1 128 66.4
GSVIVG01028293001 Vitis vinifera HOM05D004750 ORTHO05D006207 8.2e-35 151.4 128 67.2
Nitab4.5_0000086g0140 Nicotiana tabacum HOM05D004750 ORTHO05D006207 2.4e-34 149.8 124 67.7
Rhsim01G0266000 Rhododendron simsii HOM05D004750 ORTHO05D006207 2.4e-34 149.8 128 66.4
SalBow6G6555 Salvia bowleyana HOM05D004750 ORTHO05D006207 2.4e-34 149.8 128 63.3
CAN.G771.23 Capsicum annuum HOM05D004750 ORTHO05D006207 3.1e-34 149.4 128 67.2
PGSC0003DMG400020145 Solanum tuberosum HOM05D004750 ORTHO05D006207 4.1e-34 149.1 128 66.4
Solyc06g083920.4 Solanum lycopersicum HOM05D004750 ORTHO05D006207 5.3e-34 148.7 128 65.6
Sopen06g035320 Solanum pennellii HOM05D004750 ORTHO05D006207 5.3e-34 148.7 128 65.6
Cpa.g.sc50.41 Carica papaya HOM05D004750 ORTHO05D006207 7.0e-34 148.3 128 65.6
COL.COLO4_05604 Corchorus olitorius HOM05D004750 ORTHO05D006207 1.2e-33 147.5 128 64.8
Peaxi162Scf00134g00912 Petunia axillaris HOM05D004750 ORTHO05D006207 1.2e-33 147.5 124 67.7
RcHm_v2.0_Chr6g0288821 Rosa chinensis HOM05D004750 ORTHO05D006207 1.6e-33 147.1 128 63.3
TAR362G0996 Trochodendron aralioides HOM05D004750 ORTHO05D006207 1.6e-33 147.1 128 66.4
vmacro14850 Vaccinium macrocarpon HOM05D004750 ORTHO05D006207 1.6e-33 147.1 128 67.2
Lj1A64T37 Lonicera japonica HOM05D004750 ORTHO05D006207 2.0e-33 146.7 138 60.1
MD05G1200600 Malus domestica HOM05D004750 ORTHO05D006207 2.6e-33 146.4 128 63.3
Prupe.8G227200 Prunus persica HOM05D004750 ORTHO05D006207 2.6e-33 146.4 128 64.1
Duzib211G0524 Durio zibethinus HOM05D004750 ORTHO05D006207 3.5e-33 146.0 128 64.8
Thecc.01G261600 Theobroma cacao HOM05D004750 ORTHO05D006207 3.5e-33 146.0 128 64.8
CANSAT01G0335 Cannabis sativa HOM05D004750 ORTHO05D006207 4.5e-33 145.6 127 64.6
FvH4_2g21920 Fragaria vesca HOM05D004750 ORTHO05D006207 4.5e-33 145.6 128 62.5
FAN24G1514 Fragaria x ananassa HOM05D004750 ORTHO05D006207 4.5e-33 145.6 128 62.5
TWI18G0451 Tripterygium wilfordii HOM05D004750 ORTHO05D006207 4.5e-33 145.6 128 64.8
arahy.Tifrunner.gnm1.ann1.58RJ2S Arachis hypogaea HOM05D004750 ORTHO05D006207 5.9e-33 145.2 251 42.2
Manes.12G030800 Manihot esculenta HOM05D004750 ORTHO05D006207 7.7e-33 144.8 128 63.3
Phvul.007G194900 Phaseolus vulgaris HOM05D004750 ORTHO05D006207 7.7e-33 144.8 128 64.8
VMungo0720G0257 Vigna mungo HOM05D004750 ORTHO05D006207 7.7e-33 144.8 128 64.8
Gorai.004G220100 Gossypium raimondii HOM05D004750 ORTHO05D006207 1.0e-32 144.4 128 62.5
PGR031G0841 Punica granatum HOM05D004750 ORTHO05D006207 1.0e-32 144.4 128 63.3
Glyma.13G121500 Glycine max HOM05D004750 ORTHO05D006207 1.3e-32 144.1 128 64.8
FAN20G0807 Fragaria x ananassa HOM05D004750 ORTHO05D006207 1.7e-32 143.7 129 61.2
Eucgr.B01530 Eucalyptus grandis HOM05D004750 ORTHO05D006207 2.2e-32 143.3 128 62.5
FAN15G0403 Fragaria x ananassa HOM05D004750 ORTHO05D006207 2.2e-32 143.3 129 61.2
FAN27G1042 Fragaria x ananassa HOM05D004750 ORTHO05D006207 2.2e-32 143.3 129 61.2
Glyma.10G035200 Glycine max HOM05D004750 ORTHO05D006207 2.2e-32 143.3 128 64.8
Gohir.A08G189200 Gossypium hirsutum HOM05D004750 ORTHO05D006207 2.2e-32 143.3 128 61.7
arahy.Tifrunner.gnm1.ann1.I9TYEM Arachis hypogaea HOM05D004750 ORTHO05D006207 2.9e-32 142.9 251 41.8
DCAR_002681 Daucus carota HOM05D004750 ORTHO05D006207 2.9e-32 142.9 136 61.0
Nn3g19610 Nelumbo nucifera HOM05D004750 ORTHO05D006207 2.9e-32 142.9 127 63.8
Potri.005G222000 Populus trichocarpa HOM05D004750 ORTHO05D006207 2.9e-32 142.9 128 64.1
SGA_v2.0_scaffold80G25776 Striga asiatica HOM05D004750 ORTHO05D006207 2.9e-32 142.9 128 60.2
Duzib133G0290 Durio zibethinus HOM05D004750 ORTHO05D006207 3.8e-32 142.5 128 61.7
Migut.N02195 Erythranthe guttata HOM05D004750 ORTHO05D006207 3.8e-32 142.5 126 64.3
unitig_37.g12601 Utricularia gibba HOM05D004750 ORTHO05D006207 3.8e-32 142.5 128 64.1
Sed0006871 Sechium edule HOM05D004750 ORTHO05D006207 5.0e-32 142.1 128 60.9
Sc17g0000770 Simmondsia chinensis HOM05D004750 ORTHO05D006207 5.0e-32 142.1 128 63.3
AL4G40900 Arabidopsis lyrata HOM05D004750 ORTHO05D006207 6.5e-32 141.7 128 59.4
CsaV3_7G027010 Cucumis sativus L. HOM05D004750 ORTHO05D006207 6.5e-32 141.7 128 60.9
Gohir.D08G207700 Gossypium hirsutum HOM05D004750 ORTHO05D006207 6.5e-32 141.7 128 61.7
ECA248G1706 Erigeron canadensis HOM05D004750 ORTHO05D006207 8.5e-32 141.4 126 64.3
DCAR_012532 Daucus carota HOM05D004750 ORTHO05D006207 1.1e-31 141.0 128 61.7
Medtr1g070195 Medicago truncatula HOM05D004750 ORTHO05D006207 1.1e-31 141.0 128 63.3
Thhalv10016471m.g Eutrema salsugineum HOM05D004750 ORTHO05D006207 1.9e-31 140.2 128 58.6
HanXRQChr09g0249261 Helianthus annuus HOM05D004750 ORTHO05D006207 1.9e-31 140.2 126 62.7
Sabra05G0170600 Salix brachista HOM05D004750 ORTHO05D006207 1.9e-31 140.2 129 62.8
TPR.G3576 Trifolium pratense HOM05D004750 ORTHO05D006207 1.9e-31 140.2 128 62.5
Hund09589 Selenicereus undatus HOM05D004750 ORTHO05D006207 2.5e-31 139.8 185 49.2
Carub.0004s2484 Capsella rubella HOM05D004750 ORTHO05D006207 3.2e-31 139.4 128 57.8
ClCG09G008060 Citrullus lanatus HOM05D004750 ORTHO05D006207 3.2e-31 139.4 129 59.7
AT2G42450 Arabidopsis thaliana HOM05D004750 ORTHO05D006207 4.2e-31 139.0 128 57.8
C04p03600 Brassica napus HOM05D004750 ORTHO05D006207 4.2e-31 139.0 128 58.6
BolC4t21995H Brassica oleracea HOM05D004750 ORTHO05D006207 4.2e-31 139.0 128 58.6
Lalb_Chr06g0162481 Lupinus albus HOM05D004750 ORTHO05D006207 4.2e-31 139.0 128 62.5
A05p02980 Brassica napus HOM05D004750 ORTHO05D006207 5.5e-31 138.7 128 58.6
Ca_09693_v3 Cicer arietinum L. HOM05D004750 ORTHO05D006207 5.5e-31 138.7 128 62.5
MELO3C012746.2 Cucumis melo HOM05D004750 ORTHO05D006207 5.5e-31 138.7 129 59.7
Aa31LG1G24270 Aethionema arabicum HOM05D004750 ORTHO05D006207 9.4e-31 137.9 128 58.6
BraA05t19288Z Brassica rapa HOM05D004750 ORTHO05D006207 9.4e-31 137.9 128 57.0
BcaB04g17273 Brassica carinata HOM05D004750 ORTHO05D006207 2.1e-30 136.7 124 59.7
CARHR137490 Cardamine hirsuta HOM05D004750 ORTHO05D006207 2.1e-30 136.7 128 57.0
HanXRQChr01g0014351 Helianthus annuus HOM05D004750 ORTHO05D006207 2.1e-30 136.7 126 61.1
MBI18_g37354_MAGBIO Magnolia biondii HOM05D004750 ORTHO05D006207 2.1e-30 136.7 228 41.2
Cc01_g18500 Coffea canephora HOM05D004750 ORTHO05D006207 2.7e-30 136.3 128 58.6
Sp4g24590 Schrenkiella parvula HOM05D004750 ORTHO05D006207 2.7e-30 136.3 128 57.0
THA.LOC104802241 Tarenaya hassleriana HOM05D004750 ORTHO05D006207 2.7e-30 136.3 128 58.6
ATR0680G188 Amborella trichopoda HOM05D004750 ORTHO05D006207 3.6e-30 136.0 127 62.2
Os09g0571500 Oryza sativa ssp. japonica HOM05D004750 ORTHO05D006207 3.6e-30 136.0 127 57.5
Lsat_1_v5_gn_5_182081 Lactuca sativa HOM05D004750 ORTHO05D006207 4.7e-30 135.6 126 60.3
Lj5g0027127 Lotus japonicus HOM05D004750 ORTHO05D006207 4.7e-30 135.6 128 60.9
Zm00001eb095800 Zea mays HOM05D004750 ORTHO05D006207 4.7e-30 135.6 201 44.8
Aqoxy2G03613 Aquilegia oxysepala HOM05D004750 ORTHO05D006207 6.1e-30 135.2 127 60.6
PSO017G3851 Papaver somniferum HOM05D004750 ORTHO05D006207 6.1e-30 135.2 127 59.8
Ah.11g049820 Amaranthus hybridus HOM05D004750 ORTHO05D006207 8.0e-30 134.8 128 58.6
Peaxi162Scf01530g00029 Petunia axillaris HOM05D004750 ORTHO05D006207 1.0e-29 134.4 171 49.7
AUR62024737 Chenopodium quinoa HOM05D004750 ORTHO05D006207 1.4e-29 134.0 163 50.9
EL10Ac5g10422 Beta vulgaris HOM05D004750 ORTHO05D006207 2.3e-29 133.3 128 58.6
AUR62011896 Chenopodium quinoa HOM05D004750 ORTHO05D006207 2.3e-29 133.3 128 58.6
PSO063G5405 Papaver somniferum HOM05D004750 ORTHO05D006207 2.3e-29 133.3 127 59.1
CDE05G0417 Ceratophyllum demersum HOM05D004750 ORTHO05D006207 1.2e-28 131.0 127 57.5
SEGI_11819 Sequoiadendron giganteum HOM05D004750 ORTHO05D006207 1.7e-27 127.1 127 57.5
HPP92_007154 Vanilla planifolia HOM05D004750 ORTHO05D006207 4.8e-27 125.6 127 55.1
Actinidia21195 Actinidia chinensis HOM05D004750 ORTHO05D006207 4.5e-25 119.0 151 52.3
MD10G1187200 Malus domestica HOM05D004750 ORTHO05D006207 1.2e-20 104.4 108 57.4
Pp3c22_2890 Physcomitrium patens HOM05D004750 ORTHO05D006207 1.2e-20 104.4 123 48.0
AagrBONN_evm.TU.Sc2ySwM_344.2086 Anthoceros agrestis HOM05D004750 ORTHO05D006207 1.7e-19 100.5 127 44.9
SMO147G0111 Selaginella moellendorffii HOM05D004750 ORTHO05D006207 2.2e-19 100.1 121 48.8
Lsat_1_v5_gn_6_62980 Lactuca sativa HOM05D004750 ORTHO05D006207 4.1e-18 95.9 100 51.0
Lsat_1_v5_gn_7_30320 Lactuca sativa HOM05D004750 ORTHO05D006207 2.0e-17 93.6 100 52.0
Lsat_1_v5_gn_4_28641 Lactuca sativa HOM05D004750 ORTHO05D006207 2.2e-16 90.1 97 50.5
Nitab4.5_0004303g0040 Nicotiana tabacum HOM05D004750 ORTHO05D006207 8.5e-16 88.2 56 78.6
BcaB07g32727 Brassica carinata HOM05D004750 ORTHO05D006207 9.5e-15 84.7 88 53.4
Lsat_1_v5_gn_2_26340 Lactuca sativa HOM05D004750 ORTHO05D006207 1.0e-13 81.3 61 63.9
Mapoly0007s0153 Marchantia polymorpha HOM05D004750 ORTHO05D006207 5.7e-12 75.5 122 36.1
Sabra02G0032600 Salix brachista HOM05D004750 ORTHO05D006207 1.8e-10 70.5 46 80.4
Haze_15247 Corylus avellana HOM05D001467 ORTHO05D001447 2.4e-10 70.1 49 69.4
Lsat_1_v5_gn_5_93820 Lactuca sativa HOM05D001304 ORTHO05D006207 3.5e-09 66.2 61 59.0
Psat0s484g0120 Pisum sativum HOM05D004750 ORTHO05D006207 1.0e-08 64.7 58 60.3
CBR_g51917 Chara braunii HOM05D004750 ORTHO05D006207 5.0e-08 62.4 188 28.7
Potri.002G041000 Populus trichocarpa HOM05D004750 ORTHO05D006207 5.6e-07 58.9 44 61.4


User provided reference genes

Program Settings