Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_14981 Corylus avellana HOM05D006396 ORTHO05D008172 1.2e-139 500.0 269 100.0
Cfa007142 Carpinus fangiana HOM05D006396 ORTHO05D008172 8.0e-133 477.2 271 92.3
CiPaw.04G001100 Carya illinoinensis HOM05D006396 ORTHO05D008172 1.5e-115 419.9 273 82.1
QL02p069325 Quercus lobata HOM05D006396 ORTHO05D008172 2.9e-114 415.6 276 81.5
Manes.11G076200 Manihot esculenta HOM05D006396 ORTHO05D008172 3.6e-109 398.7 277 77.3
Thecc.04G048300 Theobroma cacao HOM05D006396 ORTHO05D008172 1.1e-105 387.1 277 76.2
GSVIVG01032980001 Vitis vinifera HOM05D006396 ORTHO05D008172 1.4e-105 386.7 273 77.7
COL.COLO4_13379 Corchorus olitorius HOM05D006396 ORTHO05D008172 4.2e-105 385.2 274 74.5
Sabra16G0313400 Salix brachista HOM05D006396 ORTHO05D008172 1.0e-103 380.6 275 74.9
Sabra16G0314900 Salix brachista HOM05D006396 ORTHO05D008172 1.0e-103 380.6 275 75.3
Potri.001G463200 Populus trichocarpa HOM05D006396 ORTHO05D008172 8.7e-103 377.5 283 72.4
Gohir.D11G068100 Gossypium hirsutum HOM05D006396 ORTHO05D008172 5.6e-102 374.8 274 73.0
Gorai.007G072900 Gossypium raimondii HOM05D006396 ORTHO05D008172 5.6e-102 374.8 274 73.0
TAR622G0848 Trochodendron aralioides HOM05D006396 ORTHO05D008172 9.6e-102 374.0 271 76.0
Gohir.A11G063800 Gossypium hirsutum HOM05D006396 ORTHO05D008172 1.1e-100 370.5 274 72.6
Cpa.g.sc70.60 Carica papaya HOM05D006396 ORTHO05D008172 9.0e-100 367.5 247 76.9
Lj1g0009632 Lotus japonicus HOM05D006396 ORTHO05D008172 9.0e-100 367.5 273 74.4
Ciclev10016116m.g Citrus clementina HOM05D006396 ORTHO05D008172 1.5e-99 366.7 287 71.8
Dinv33276 Davidia involucrata HOM05D006396 ORTHO05D008172 2.0e-99 366.3 272 74.3
Rhsim08G0038900 Rhododendron simsii HOM05D006396 ORTHO05D008172 4.5e-99 365.2 282 72.0
Glyma.16G147700 Glycine max HOM05D006396 ORTHO05D008172 1.3e-98 363.6 267 72.7
Eucgr.I01598 Eucalyptus grandis HOM05D006396 ORTHO05D008172 2.2e-98 362.8 273 72.5
Nn4g22123 Nelumbo nucifera HOM05D006396 ORTHO05D008172 2.2e-98 362.8 247 76.9
Atru.chr6.2699 Acer truncatum HOM05D006396 ORTHO05D008172 3.8e-98 362.1 280 72.5
Oeu041974.1 Olea europaea HOM05D006396 ORTHO05D008172 1.1e-97 360.5 238 78.2
SalBow1G8636 Salvia bowleyana HOM05D006396 ORTHO05D008172 1.4e-97 360.1 273 72.2
Phvul.004G069700 Phaseolus vulgaris HOM05D006396 ORTHO05D008172 9.3e-97 357.5 270 71.9
VMungo0464G1242 Vigna mungo HOM05D006396 ORTHO05D008172 2.1e-96 356.3 270 72.2
vmacro18382 Vaccinium macrocarpon HOM05D006396 ORTHO05D008172 4.6e-96 355.1 279 69.2
Hund12907 Selenicereus undatus HOM05D006396 ORTHO05D008172 6.0e-96 354.8 268 70.9
MSTRG.15316 Avicennia marina HOM05D006396 ORTHO05D008172 7.9e-96 354.4 274 71.2
TWI39G0493 Tripterygium wilfordii HOM05D006396 ORTHO05D008172 3.0e-95 352.4 276 72.5
arahy.Tifrunner.gnm1.ann1.Q1FZEB Arachis hypogaea HOM05D006396 ORTHO05D008172 3.9e-95 352.1 268 73.5
FAN14G4577 Fragaria x ananassa HOM05D006396 ORTHO05D008172 5.1e-95 351.7 280 69.3
RcHm_v2.0_Chr2g0176531 Rosa chinensis HOM05D006396 ORTHO05D008172 5.1e-95 351.7 277 69.7
FAN05G4097 Fragaria x ananassa HOM05D006396 ORTHO05D008172 1.9e-94 349.7 280 68.6
FAN09G2227 Fragaria x ananassa HOM05D006396 ORTHO05D008172 1.9e-94 349.7 280 68.9
arahy.Tifrunner.gnm1.ann1.P0PZ58 Arachis hypogaea HOM05D006396 ORTHO05D008172 4.3e-94 348.6 269 74.0
PGR142G1470 Punica granatum HOM05D006396 ORTHO05D008172 1.3e-93 347.1 279 68.5
Sed0011277 Sechium edule HOM05D006396 ORTHO05D008172 1.6e-93 346.7 278 69.8
Lalb_Chr14g0364101 Lupinus albus HOM05D006396 ORTHO05D008172 4.8e-93 345.1 270 70.0
Medtr7g084160 Medicago truncatula HOM05D006396 ORTHO05D008172 2.4e-92 342.8 269 69.9
Lj7A617G76 Lonicera japonica HOM05D006396 ORTHO05D008172 3.1e-92 342.4 187 90.9
AUR62017434 Chenopodium quinoa HOM05D006396 ORTHO05D008172 6.9e-92 341.3 273 67.4
AUR62037820 Chenopodium quinoa HOM05D006396 ORTHO05D008172 9.0e-92 340.9 271 66.8
MD17G1006700 Malus domestica HOM05D006396 ORTHO05D008172 9.0e-92 340.9 189 92.1
Ca_08202_v3 Cicer arietinum L. HOM05D006396 ORTHO05D008172 1.5e-91 340.1 270 70.7
Ah.03g136630 Amaranthus hybridus HOM05D006396 ORTHO05D008172 2.0e-91 339.7 273 68.1
ClCG01G007850 Citrullus lanatus HOM05D006396 ORTHO05D008172 3.4e-91 339.0 277 68.6
CANSAT21G0889 Cannabis sativa HOM05D006396 ORTHO05D008172 5.8e-91 338.2 271 73.1
CsaV3_5G024930 Cucumis sativus L. HOM05D006396 ORTHO05D008172 7.6e-91 337.8 277 68.6
DCAR_014466 Daucus carota HOM05D006396 ORTHO05D008172 7.6e-91 337.8 262 70.6
MD09G1002500 Malus domestica HOM05D006396 ORTHO05D008172 1.3e-90 337.0 289 67.5
Psat0s4148g0040 Pisum sativum HOM05D006396 ORTHO05D008172 2.2e-90 336.3 269 70.6
Hma1.2p1_1389F.1_g279970 Hydrangea macrophylla HOM05D006396 ORTHO05D008172 3.8e-90 335.5 188 89.9
Prupe.3G313700 Prunus persica HOM05D006396 ORTHO05D008172 8.4e-90 334.3 283 72.8
SGA_v2.0_scaffold174G39282 Striga asiatica HOM05D006396 ORTHO05D008172 1.4e-89 333.6 194 87.1
Actinidia37717 Actinidia chinensis HOM05D006396 ORTHO05D008172 1.9e-89 333.2 284 66.9
CSS0007606 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 4.2e-89 332.0 194 88.1
TPR.G15411 Trifolium pratense HOM05D006396 ORTHO05D008172 4.2e-89 332.0 267 67.8
ATR0582G370 Amborella trichopoda HOM05D006396 ORTHO05D008172 7.1e-89 331.3 195 85.6
Solyc02g005210.3 Solanum lycopersicum HOM05D006396 ORTHO05D008172 2.1e-88 329.7 193 86.5
HanXRQChr17g0550901 Helianthus annuus HOM05D006396 ORTHO05D008172 2.7e-88 329.3 273 68.5
Glyma.02G066600 Glycine max HOM05D006396 ORTHO05D008172 3.5e-88 328.9 225 77.8
Sopen02g001100 Solanum pennellii HOM05D006396 ORTHO05D008172 1.0e-87 327.4 193 86.0
CAN.G1108.4 Capsicum annuum HOM05D006396 ORTHO05D008172 1.3e-87 327.0 195 84.6
Nitab4.5_0000139g0180 Nicotiana tabacum HOM05D006396 ORTHO05D008172 1.3e-87 327.0 195 84.6
PGSC0003DMG400014532 Solanum tuberosum HOM05D006396 ORTHO05D008172 1.3e-87 327.0 193 85.5
Sc03g0005260 Simmondsia chinensis HOM05D006396 ORTHO05D008172 1.8e-87 326.6 269 69.1
Aqoxy5G03069 Aquilegia oxysepala HOM05D006396 ORTHO05D008172 2.3e-87 326.2 275 66.5
Nitab4.5_0005452g0030 Nicotiana tabacum HOM05D006396 ORTHO05D008172 2.3e-87 326.2 195 84.6
PSO478G0237 Papaver somniferum HOM05D006396 ORTHO05D008172 2.3e-87 326.2 241 72.6
unitig_32.g11883 Utricularia gibba HOM05D006396 ORTHO05D008172 1.1e-86 323.9 235 72.3
PSO017G3463 Papaver somniferum HOM05D006396 ORTHO05D008172 3.3e-86 322.4 241 72.2
ECA246G0184 Erigeron canadensis HOM05D006396 ORTHO05D008172 4.3e-86 322.0 192 87.0
THA.LOC104825656 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 4.3e-86 322.0 193 82.4
Cc07_g01330 Coffea canephora HOM05D006396 ORTHO05D008172 4.8e-85 318.5 268 65.7
Lsat_1_v5_gn_3_104821 Lactuca sativa HOM05D006396 ORTHO05D008172 6.2e-85 318.2 271 67.2
CDE05G2379 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 8.1e-85 317.8 260 65.0
BolC7t44094H Brassica oleracea HOM05D006396 ORTHO05D008172 2.4e-84 316.2 195 83.1
THA.LOC104805299 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 2.4e-84 316.2 275 63.6
Aa31LG2G5850 Aethionema arabicum HOM05D006396 ORTHO05D008172 3.1e-84 315.8 193 82.4
BcaNung07107 Brassica carinata HOM05D006396 ORTHO05D008172 5.3e-84 315.1 188 84.0
A06p41790 Brassica napus HOM05D006396 ORTHO05D008172 5.3e-84 315.1 195 82.6
C07p35740 Brassica napus HOM05D006396 ORTHO05D008172 5.3e-84 315.1 188 84.0
Sp2g15830 Schrenkiella parvula HOM05D006396 ORTHO05D008172 1.5e-83 313.5 195 82.6
Thhalv10004768m.g Eutrema salsugineum HOM05D006396 ORTHO05D008172 2.0e-83 313.2 195 82.6
C02p53250 Brassica napus HOM05D006396 ORTHO05D008172 3.4e-83 312.4 193 82.9
BcaC06g31047 Brassica carinata HOM05D006396 ORTHO05D008172 5.8e-83 311.6 194 82.0
CARHR147730 Cardamine hirsuta HOM05D006396 ORTHO05D008172 2.2e-82 309.7 188 83.5
BolC2t11397H Brassica oleracea HOM05D006396 ORTHO05D008172 1.1e-81 307.4 193 81.3
BraA02t08477Z Brassica rapa HOM05D006396 ORTHO05D008172 1.1e-81 307.4 186 83.3
AL5G15550 Arabidopsis lyrata HOM05D006396 ORTHO05D008172 3.2e-81 305.8 186 82.8
Carub.0005s0471 Capsella rubella HOM05D006396 ORTHO05D008172 4.2e-81 305.4 186 82.3
AT3G26710 Arabidopsis thaliana HOM05D006396 ORTHO05D008172 2.7e-80 302.8 186 81.7
HPP92_009800 Vanilla planifolia HOM05D006396 ORTHO05D008172 2.7e-80 302.8 185 83.2
Os11g0526200 Oryza sativa ssp. japonica HOM05D006396 ORTHO05D008172 5.1e-79 298.5 190 76.8
Zm00001eb198120 Zea mays HOM05D006396 ORTHO05D008172 5.1e-79 298.5 185 78.9
Migut.L00475 Erythranthe guttata HOM05D006396 ORTHO05D008172 4.1e-76 288.9 258 62.4
CSS0000498 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 6.9e-76 288.1 191 79.6
EL10Ac6g13409 Beta vulgaris HOM05D006396 ORTHO05D008172 1.7e-74 283.5 277 59.6
Mapoly0054s0013 Marchantia polymorpha HOM05D006396 ORTHO05D008172 7.2e-73 278.1 195 70.3
SMO146G0400 Selaginella moellendorffii HOM05D006396 ORTHO05D008172 2.8e-69 266.2 188 69.1
Duzib147G0670 Durio zibethinus HOM05D006396 ORTHO05D008172 2.5e-65 253.1 274 55.8
BcaC03g17380 Brassica carinata HOM05D006396 ORTHO05D008172 4.2e-65 252.3 194 72.2
CBR_g29738 Chara braunii HOM05D006396 ORTHO05D008172 2.7e-64 249.6 194 64.4
FvH4_6g54310 Fragaria vesca HOM05D006396 ORTHO05D008172 2.3e-63 246.5 218 65.1
Pp3c2_10260 Physcomitrium patens HOM05D006396 ORTHO05D008172 1.1e-62 244.2 212 59.0
MELO3C005101.2 Cucumis melo HOM05D006396 ORTHO05D008172 1.2e-59 234.2 215 65.1
CDE05G2841 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 9.4e-57 224.6 198 62.6
PRCOL_00002489 Prasinoderma coloniale HOM05D006396 ORTHO05D008172 3.8e-50 202.6 196 52.6
SGA_v2.0_scaffold174G39277 Striga asiatica HOM05D006396 ORTHO05D008172 4.7e-48 195.7 180 61.1
Peaxi162Scf00818g00123 Petunia axillaris HOM05D006396 ORTHO05D008172 3.0e-47 193.0 110 85.5
MCO04G060 Micromonas commoda HOM05D006396 ORTHO05D008172 3.3e-46 189.5 185 51.9
AagrBONN_evm.TU.Sc2ySwM_368.425 Anthoceros agrestis HOM05D006396 ORTHO05D008172 4.4e-46 189.1 134 72.4
SEGI_35956 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 3.5e-43 179.5 110 77.3
Cre16.g662150 Chlamydomonas reinhardtii HOM05D006396 ORTHO05D008172 7.5e-38 161.8 188 46.3
FAN02G1480 Fragaria x ananassa HOM05D006396 ORTHO05D008172 1.9e-33 147.1 142 59.9
SEGI_37491 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 5.0e-26 122.5 79 75.9
BolC2t09342H Brassica oleracea HOM05D006396 ORTHO05D000401 5.6e-17 92.4 71 69.0
MD04G1090800 Malus domestica HOM05D006396 ORTHO05D008172 8.0e-16 88.6 50 84.0
BolC1t02127H Brassica oleracea HOM05D000589 ORTHO05D000401 9.8e-14 81.6 93 54.8
Psat7g159680 Pisum sativum HOM05D006396 ORTHO05D008172 3.9e-10 69.7 44 70.5
A02p34690 Brassica napus HOM05D006396 ORTHO05D008172 9.5e-09 65.1 44 70.5
C01p21980 Brassica napus HOM05D004448 ORTHO05D015948 1.1e-07 61.6 65 55.4


User provided reference genes

Program Settings