Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_14879 Corylus avellana HOM05D001420 ORTHO05D009292 4.0e-102 374.8 191 100.0
QL02p071311 Quercus lobata HOM05D001420 ORTHO05D009292 3.1e-78 295.4 189 83.1
Haze_14955 Corylus avellana HOM05D001420 ORTHO05D009292 1.2e-77 293.5 151 99.3
Potri.001G329600 Populus trichocarpa HOM05D001420 ORTHO05D009292 4.9e-76 288.1 182 80.8
Cfa007225 Carpinus fangiana HOM05D001420 ORTHO05D009292 8.4e-76 287.3 163 90.8
MD09G1010400 Malus domestica HOM05D001420 ORTHO05D009292 3.2e-75 285.4 173 83.2
Prupe.3G306700 Prunus persica HOM05D001420 ORTHO05D009292 4.2e-75 285.0 180 82.2
GSVIVG01033089001 Vitis vinifera HOM05D001420 ORTHO05D009292 4.2e-75 285.0 177 79.7
RcHm_v2.0_Chr2g0175601 Rosa chinensis HOM05D001420 ORTHO05D009292 4.3e-72 275.0 176 81.2
PGR142G3591 Punica granatum HOM05D001420 ORTHO05D009292 5.6e-72 274.6 191 74.9
Lj1g0001542 Lotus japonicus HOM05D001420 ORTHO05D009292 1.3e-71 273.5 177 78.0
TAR622G0082 Trochodendron aralioides HOM05D001420 ORTHO05D009292 1.6e-71 273.1 177 77.4
Cpa.g.sc171.11 Carica papaya HOM05D001420 ORTHO05D009292 2.1e-71 272.7 180 75.6
Glyma.19G091500 Glycine max HOM05D001420 ORTHO05D009292 6.2e-71 271.2 177 76.8
Medtr7g029105 Medicago truncatula HOM05D001420 ORTHO05D009292 4.0e-70 268.5 178 76.4
FvH4_6g53561 Fragaria vesca HOM05D001420 ORTHO05D009292 5.3e-70 268.1 176 78.4
FAN09G1657 Fragaria x ananassa HOM05D001420 ORTHO05D009292 9.0e-70 267.3 176 77.3
TPR.G38286 Trifolium pratense HOM05D001420 ORTHO05D009292 2.6e-69 265.8 176 75.6
Duzib147G1300 Durio zibethinus HOM05D001420 ORTHO05D009292 5.8e-69 264.6 182 72.5
MBI11_g44423_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 5.8e-69 264.6 178 74.2
CSS0004965 Camellia sinensis var. sinensis HOM05D001420 ORTHO05D009292 9.9e-69 263.8 177 73.4
Dinv25658 Davidia involucrata HOM05D001420 ORTHO05D002488 9.9e-69 263.8 187 71.7
Thecc.04G036700 Theobroma cacao HOM05D001420 ORTHO05D009292 9.9e-69 263.8 182 72.5
arahy.Tifrunner.gnm1.ann1.WDB61R Arachis hypogaea HOM05D001420 ORTHO05D009292 1.3e-68 263.5 180 72.8
vmacro18348 Vaccinium macrocarpon HOM05D001420 ORTHO05D009292 1.3e-68 263.5 184 71.2
Nitab4.5_0005161g0070 Nicotiana tabacum HOM05D001420 ORTHO05D009292 3.8e-68 261.9 188 69.1
Actinidia04437 Actinidia chinensis HOM05D001420 ORTHO05D009292 4.9e-68 261.5 173 74.6
Glyma.16G056200 Glycine max HOM05D001420 ORTHO05D009292 4.9e-68 261.5 180 72.2
CANSAT64G1297 Cannabis sativa HOM05D001420 ORTHO05D009292 1.9e-67 259.6 173 74.6
Psat3g174720 Pisum sativum HOM05D001420 ORTHO05D002488 1.9e-67 259.6 184 72.3
Eucgr.I01645 Eucalyptus grandis HOM05D001420 ORTHO05D009292 2.4e-67 259.2 176 73.3
THA.LOC104825624 Tarenaya hassleriana HOM05D001420 ORTHO05D009292 2.4e-67 259.2 176 72.2
Migut.F00060 Erythranthe guttata HOM05D001420 ORTHO05D009292 4.2e-67 258.5 176 71.6
Oeu035224.1 Olea europaea HOM05D001420 ORTHO05D009292 7.1e-67 257.7 179 72.1
TWI60G0015 Tripterygium wilfordii HOM05D001420 ORTHO05D009292 7.1e-67 257.7 188 70.2
VMungo1383G3091 Vigna mungo HOM05D001420 ORTHO05D009292 9.3e-67 257.3 176 72.2
FAN05G4256 Fragaria x ananassa HOM05D001420 ORTHO05D009292 1.6e-66 256.5 188 71.8
Hma1.2p1_1278F.1_g272270 Hydrangea macrophylla HOM05D001420 ORTHO05D009292 1.6e-66 256.5 177 71.2
Cc07_g00860 Coffea canephora HOM05D001420 ORTHO05D009292 4.6e-66 255.0 171 73.7
Manes.15G161200 Manihot esculenta HOM05D001420 ORTHO05D009292 4.6e-66 255.0 174 75.9
Gohir.A09G036000 Gossypium hirsutum HOM05D001420 ORTHO05D009292 6.0e-66 254.6 181 70.2
Gorai.006G042300 Gossypium raimondii HOM05D001420 ORTHO05D009292 7.9e-66 254.2 181 70.7
Nitab4.5_0000559g0390 Nicotiana tabacum HOM05D001420 ORTHO05D009292 1.3e-65 253.4 185 68.6
FAN14G1551 Fragaria x ananassa HOM05D001420 ORTHO05D000136 1.8e-65 253.1 167 78.4
Lalb_Chr22g0360361 Lupinus albus HOM05D001420 ORTHO05D009292 2.3e-65 252.7 172 73.8
Sabra16G0211000 Salix brachista HOM05D001420 ORTHO05D009292 3.9e-65 251.9 263 56.7
Nn3g16459 Nelumbo nucifera HOM05D001420 ORTHO05D009292 8.7e-65 250.8 184 68.5
MSTRG.3074 Avicennia marina HOM05D001420 ORTHO05D009292 1.9e-64 249.6 176 71.0
CSS0009369 Camellia sinensis var. sinensis HOM05D001420 ORTHO05D009292 1.9e-64 249.6 191 67.5
Aqoxy3G01555 Aquilegia oxysepala HOM05D001420 ORTHO05D009292 3.3e-64 248.8 171 72.5
AL5G16160 Arabidopsis lyrata HOM05D001420 ORTHO05D009292 5.6e-64 248.1 175 69.7
SGA_v2.0_scaffold44G16915 Striga asiatica HOM05D001420 ORTHO05D009292 5.6e-64 248.1 175 69.7
BcaC04g23914 Brassica carinata HOM05D001420 ORTHO05D009292 2.1e-63 246.1 175 69.1
Rhsim08G0042700 Rhododendron simsii HOM05D001420 ORTHO05D009292 2.1e-63 246.1 181 70.2
Thhalv10004992m.g Eutrema salsugineum HOM05D001420 ORTHO05D009292 3.6e-63 245.4 175 68.6
Sp2g16180 Schrenkiella parvula HOM05D001420 ORTHO05D009292 4.8e-63 245.0 175 69.7
BcaB04g19424 Brassica carinata HOM05D001420 ORTHO05D009292 6.2e-63 244.6 175 68.6
PGSC0003DMG400022915 Solanum tuberosum HOM05D001420 ORTHO05D009292 1.1e-62 243.8 173 67.6
A09p03260 Brassica napus HOM05D001420 ORTHO05D009292 1.4e-62 243.4 176 69.3
BraA09t35964Z Brassica rapa HOM05D001420 ORTHO05D009292 1.4e-62 243.4 176 69.3
AT3G27050 Arabidopsis thaliana HOM05D001420 ORTHO05D009292 2.4e-62 242.7 175 68.6
C09p03460 Brassica napus HOM05D001420 ORTHO05D009292 5.3e-62 241.5 176 68.8
BolC9t53267H Brassica oleracea HOM05D001420 ORTHO05D009292 5.3e-62 241.5 176 68.8
CARHR148270 Cardamine hirsuta HOM05D001420 ORTHO05D009292 5.3e-62 241.5 175 67.4
unitig_60.g25408 Utricularia gibba HOM05D001420 ORTHO05D009292 5.3e-62 241.5 177 69.5
PSO478G4377 Papaver somniferum HOM05D001420 ORTHO05D009292 2.6e-61 239.2 180 65.6
AUR62017830 Chenopodium quinoa HOM05D001420 ORTHO05D009292 7.6e-61 237.7 176 67.0
Sc15g0002740 Simmondsia chinensis HOM05D001420 ORTHO05D009292 4.9e-60 235.0 176 66.5
AUR62003518 Chenopodium quinoa HOM05D001420 ORTHO05D009292 6.4e-60 234.6 173 67.1
Carub.0005s0529 Capsella rubella HOM05D001420 ORTHO05D009292 1.4e-59 233.4 175 65.1
HPP92_009721 Vanilla planifolia HOM05D001420 ORTHO05D009292 1.9e-59 233.0 180 66.7
Aa31LG2G5540 Aethionema arabicum HOM05D001420 ORTHO05D009292 5.5e-59 231.5 176 65.9
Atru.chr6.2574 Acer truncatum HOM05D001420 ORTHO05D009292 2.1e-58 229.6 155 76.1
ATR0561G272 Amborella trichopoda HOM05D001420 ORTHO05D009292 6.0e-58 228.0 170 67.1
PSO017G5378 Papaver somniferum HOM05D001420 ORTHO05D009292 1.0e-57 227.3 187 62.0
HanXRQChr17g0550091 Helianthus annuus HOM05D001420 ORTHO05D009292 1.3e-57 226.9 165 71.5
SalBow4G1795 Salvia bowleyana HOM05D001420 ORTHO05D009292 6.7e-57 224.6 178 64.0
CsaV3_3G026980 Cucumis sativus L. HOM05D001420 ORTHO05D009292 1.5e-56 223.4 180 65.0
ClCG05G013550 Citrullus lanatus HOM05D001420 ORTHO05D009292 4.3e-56 221.9 183 65.6
CDE05G2056 Ceratophyllum demersum HOM05D001420 ORTHO05D009292 6.2e-55 218.0 168 63.7
Sed0020252 Sechium edule HOM05D001420 ORTHO05D009292 2.4e-54 216.1 178 64.0
Lsat_1_v5_gn_0_26060 Lactuca sativa HOM05D001420 ORTHO05D009292 3.1e-54 215.7 166 66.3
MBI11_g05328_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 5.3e-54 214.9 149 73.8
Phvul.001G093200 Phaseolus vulgaris HOM05D001420 ORTHO05D009292 1.5e-53 213.4 177 61.0
ECA246G1005 Erigeron canadensis HOM05D001420 ORTHO05D002488 2.6e-53 212.6 166 63.9
SalBow4G0299 Salvia bowleyana HOM05D001420 ORTHO05D009292 2.2e-52 209.5 209 55.0
Ciclev10017089m.g Citrus clementina HOM05D001420 ORTHO05D009292 1.9e-51 206.5 136 76.5
Gohir.D09G037000 Gossypium hirsutum HOM05D001420 ORTHO05D009292 5.5e-51 204.9 145 70.3
SEGI_21368 Sequoiadendron giganteum HOM05D001420 ORTHO05D009292 1.6e-50 203.4 171 56.7
Dinv33335 Davidia involucrata HOM05D001420 ORTHO05D009292 2.1e-50 203.0 120 82.5
Peaxi162Scf00700g00030 Petunia axillaris HOM05D001420 ORTHO05D009292 4.6e-50 201.8 138 69.6
RcHm_v2.0_Chr2g0175681 Rosa chinensis HOM05D001420 ORTHO05D009292 7.9e-50 201.1 137 78.1
Os11g0488600 Oryza sativa ssp. japonica HOM05D001420 ORTHO05D009292 1.1e-48 197.2 178 57.3
Zm00001eb112760 Zea mays HOM05D001420 ORTHO05D009292 1.8e-46 189.9 195 52.3
MELO3C014890.2 Cucumis melo HOM05D001420 ORTHO05D009292 6.9e-46 188.0 151 65.6
AagrBONN_evm.TU.Sc2ySwM_228.3079 Anthoceros agrestis HOM05D001420 ORTHO05D009292 1.5e-45 186.8 177 49.7
Pp3c1_27230 Physcomitrium patens HOM05D001420 ORTHO05D009292 6.5e-44 181.4 170 52.4
Pp3c14_4200 Physcomitrium patens HOM05D001420 ORTHO05D009292 3.2e-43 179.1 172 48.3
Lj7C610G7 Lonicera japonica HOM05D001420 ORTHO05D009292 5.5e-43 178.3 118 72.9
MD16G1254400 Malus domestica HOM05D001420 ORTHO05D009292 4.6e-42 175.3 119 76.5
SMO119G0238 Selaginella moellendorffii HOM05D001420 ORTHO05D009292 7.7e-37 157.9 140 55.7
Ah.03g147520 Amaranthus hybridus HOM05D001420 ORTHO05D009292 2.2e-36 156.4 140 60.7
CDE05G0537 Ceratophyllum demersum HOM05D001420 ORTHO05D009292 1.1e-30 137.5 115 57.4
CBR_g762 Chara braunii HOM05D001420 ORTHO05D009292 1.2e-29 134.0 160 41.2
DCAR_021795 Daucus carota HOM05D001420 ORTHO05D009292 4.8e-23 112.1 88 62.5
CiPaw.03G055800 Carya illinoinensis HOM05D001420 ORTHO05D002488 1.4e-22 110.5 70 80.0
FAN02G0503 Fragaria x ananassa HOM05D001420 ORTHO05D009292 2.3e-17 93.2 69 71.0
Hund12739 Selenicereus undatus HOM05D001420 ORTHO05D009292 2.2e-12 76.6 54 75.9
Cre01.g049050 Chlamydomonas reinhardtii HOM05D001420 ORTHO05D009292 9.4e-11 71.2 148 27.7
Nitab4.5_0000525g0030 Nicotiana tabacum HOM05D001420 ORTHO05D009292 1.6e-10 70.5 42 76.2
Medtr1g051110 Medicago truncatula HOM05D001420 ORTHO05D009292 5.7e-08 62.0 72 52.8
Actinidia30872 Actinidia chinensis HOM05D005765 ORTHO05D002313 3.1e-06 56.2 97 40.2


User provided reference genes

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