Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_14745 Corylus avellana HOM05D001812 ORTHO05D001874 9.1e-99 363.6 189 100.0
Cfa007364 Carpinus fangiana HOM05D001812 ORTHO05D001874 9.3e-27 124.4 89 77.5
CiPaw.04G029000 Carya illinoinensis HOM05D001812 ORTHO05D001874 9.6e-24 114.4 86 70.9
CiPaw.03G044200 Carya illinoinensis HOM05D001812 ORTHO05D001874 9.9e-21 104.4 94 66.0
Manes.17G111900 Manihot esculenta HOM05D001812 ORTHO05D001874 1.0e-17 94.4 88 59.1
TWI36G0203 Tripterygium wilfordii HOM05D001812 ORTHO05D001874 5.6e-16 88.6 88 55.7
Manes.15G151200 Manihot esculenta HOM05D001812 ORTHO05D001874 1.3e-15 87.4 88 56.8
Prupe.3G292400 Prunus persica HOM05D001812 ORTHO05D001874 1.4e-14 84.0 96 53.1
Potri.001G344400 Populus trichocarpa HOM05D001812 ORTHO05D001874 5.3e-14 82.0 88 56.8
Sabra16G0223600 Salix brachista HOM05D001812 ORTHO05D001874 5.3e-14 82.0 88 53.4
QL02p074407 Quercus lobata HOM05D001812 ORTHO05D001874 6.9e-14 81.6 88 54.5
Gohir.D09G029400 Gossypium hirsutum HOM05D001812 ORTHO05D001874 2.2e-12 76.6 88 51.1
TWI12G1050 Tripterygium wilfordii HOM05D001812 ORTHO05D001874 6.5e-12 75.1 88 47.7
Gohir.A09G029666 Gossypium hirsutum HOM05D001812 ORTHO05D001874 1.1e-11 74.3 88 50.0
Duzib147G0179 Durio zibethinus HOM05D001812 ORTHO05D001874 1.4e-11 73.9 88 48.9
Eucgr.I01738 Eucalyptus grandis HOM05D001812 ORTHO05D001874 1.4e-11 73.9 92 48.9
Gorai.006G034300 Gossypium raimondii HOM05D001812 ORTHO05D001874 2.5e-11 73.2 88 50.0
Thecc.04G018000 Theobroma cacao HOM05D001812 ORTHO05D001874 1.6e-10 70.5 95 45.3
GSVIVG01032398001 Vitis vinifera HOM05D001812 ORTHO05D001874 1.6e-10 70.5 88 46.6
Atru.chr6.2404 Acer truncatum HOM05D001812 ORTHO05D001874 1.8e-09 67.0 95 48.4
Atru.chr4.1460 Acer truncatum HOM05D001812 ORTHO05D001874 5.1e-09 65.5 95 48.4
CSS0009181 Camellia sinensis var. sinensis HOM05D001812 ORTHO05D001874 8.7e-09 64.7 105 41.9
MD17G1026300 Malus domestica HOM05D001812 ORTHO05D001874 1.1e-08 64.3 106 42.5
Gohir.A05G355400 Gossypium hirsutum HOM05D001812 ORTHO05D001874 2.5e-08 63.2 88 44.3
RcHm_v2.0_Chr2g0173141 Rosa chinensis HOM05D001812 ORTHO05D001874 2.5e-08 63.2 95 42.1
Hma1.2p1_0999F.1_g246120 Hydrangea macrophylla HOM05D001812 ORTHO05D001874 9.7e-08 61.2 89 41.6
Gohir.D04G057800 Gossypium hirsutum HOM05D001812 ORTHO05D001874 1.3e-07 60.8 95 42.1
Gorai.012G064500 Gossypium raimondii HOM05D001812 ORTHO05D001874 1.3e-07 60.8 95 42.1
MD09G1026600 Malus domestica HOM05D001812 ORTHO05D001874 1.3e-07 60.8 98 42.9
FvH4_6g51500 Fragaria vesca HOM05D001812 ORTHO05D001874 6.3e-07 58.5 78 47.4
Lju41C42T9 Lonicera japonica HOM05D001812 ORTHO05D001874 6.3e-07 58.5 104 37.5
Cpa.g.sc108.71 Carica papaya HOM05D001812 ORTHO05D001874 1.1e-06 57.8 88 42.0
CsaV3_5G027100 Cucumis sativus L. HOM05D001812 ORTHO05D001874 1.4e-06 57.4 68 50.0
MELO3C021584.2 Cucumis melo HOM05D001812 ORTHO05D001874 2.4e-06 56.6 79 45.6
MD09G1024500 Malus domestica HOM05D001812 ORTHO05D001874 3.1e-06 56.2 84 39.3
Glyma.16G070400 Glycine max HOM05D001812 ORTHO05D001874 4.1e-06 55.8 89 41.6
FAN09G3298 Fragaria x ananassa HOM05D001812 ORTHO05D001874 5.3e-06 55.5 88 42.0
FAN14G4942 Fragaria x ananassa HOM05D001812 ORTHO05D001874 5.3e-06 55.5 78 46.2
TAR629G2585 Trochodendron aralioides HOM05D001812 ORTHO05D001874 5.3e-06 55.5 97 41.2


User provided reference genes

Program Settings