Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_14721 Corylus avellana HOM05D008092 ORTHO05D010277 9.9e-80 300.1 152 100.0
Haze_14716 Corylus avellana HOM05D008092 ORTHO05D010277 1.2e-72 276.6 156 93.6
Cfa007393 Carpinus fangiana HOM05D008092 ORTHO05D010277 6.7e-68 260.8 152 91.4
QL93p1842_0091 Quercus lobata HOM05D008092 ORTHO05D010277 1.6e-53 213.0 152 74.3
QL02p075225 Quercus lobata HOM05D008092 ORTHO05D010277 6.1e-53 211.1 152 73.7
CiPaw.02G035400 Carya illinoinensis HOM05D008092 ORTHO05D010277 3.9e-52 208.4 152 73.7
CiPaw.03G041800 Carya illinoinensis HOM05D008092 ORTHO05D010277 3.3e-51 205.3 152 72.4
CiPaw.04G027500 Carya illinoinensis HOM05D008092 ORTHO05D010277 9.7e-43 177.2 151 65.6
Dinv33463 Davidia involucrata HOM05D008092 ORTHO05D010277 6.3e-34 147.9 156 56.4
TAR374G1215 Trochodendron aralioides HOM05D008092 ORTHO05D010277 3.8e-31 138.7 156 51.9
GSVIVG01032429001 Vitis vinifera HOM05D008092 ORTHO05D010277 9.4e-30 134.0 154 49.4
Atru.chr6.2355 Acer truncatum HOM05D008092 ORTHO05D010277 3.4e-27 125.6 157 52.2
CSS0000484 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 5.9e-24 114.8 158 48.1
CANSAT64G0606 Cannabis sativa HOM05D008092 ORTHO05D010277 5.9e-24 114.8 155 41.9
Manes.17G115000 Manihot esculenta HOM05D008092 ORTHO05D010277 1.0e-23 114.0 152 45.4
Duzib187G1326 Durio zibethinus HOM05D008092 ORTHO05D010277 3.8e-23 112.1 152 47.4
Prupe.3G289300 Prunus persica HOM05D008092 ORTHO05D010277 8.5e-23 110.9 160 45.6
CSS0015151 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 1.1e-22 110.5 158 46.8
Gohir.A10G102700 Gossypium hirsutum HOM05D008092 ORTHO05D010277 2.5e-22 109.4 155 45.8
Thecc.04G015000 Theobroma cacao HOM05D008092 ORTHO05D010277 9.5e-22 107.5 157 43.9
Gohir.D10G086900 Gossypium hirsutum HOM05D008092 ORTHO05D010277 1.2e-21 107.1 157 44.6
TWI36G1451 Tripterygium wilfordii HOM05D008092 ORTHO05D010277 1.6e-21 106.7 136 52.9
Gorai.011G095100 Gossypium raimondii HOM05D008092 ORTHO05D010277 3.6e-21 105.5 157 43.9
vmacro05852 Vaccinium macrocarpon HOM05D008092 ORTHO05D010277 1.0e-20 104.0 153 41.8
MD17G1030500 Malus domestica HOM05D008092 ORTHO05D010277 3.0e-20 102.4 156 44.9
Phvul.004G010900 Phaseolus vulgaris HOM05D008092 ORTHO05D010277 1.7e-18 96.7 154 40.9
PGR083G2137 Punica granatum HOM05D008092 ORTHO05D010277 1.7e-18 96.7 153 40.5
MBI10_g33304_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 3.7e-18 95.5 166 40.4
arahy.Tifrunner.gnm1.ann1.M07V8F Arachis hypogaea HOM05D008092 ORTHO05D010277 4.9e-18 95.1 160 44.4
arahy.Tifrunner.gnm1.ann1.KZ8L38 Arachis hypogaea HOM05D008092 ORTHO05D010277 6.3e-18 94.7 121 51.2
Actinidia06006 Actinidia chinensis HOM05D008092 ORTHO05D010277 8.3e-18 94.4 155 40.6
COL.COLO4_29084 Corchorus olitorius HOM05D008092 ORTHO05D010277 8.3e-18 94.4 152 40.8
VMungo0464G1885 Vigna mungo HOM05D008092 ORTHO05D010277 1.8e-17 93.2 154 39.6
MBI10_g44380_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 4.1e-17 92.0 162 40.7
Rhsim10G0018500 Rhododendron simsii HOM05D008092 ORTHO05D010277 7.0e-17 91.3 154 38.3
MELO3C009977.2 Cucumis melo HOM05D008092 ORTHO05D010277 1.6e-16 90.1 151 39.7
Glyma.05G005000 Glycine max HOM05D008092 ORTHO05D010277 2.0e-16 89.7 154 40.9
CsaV3_3G042670 Cucumis sativus L. HOM05D008092 ORTHO05D010277 1.3e-15 87.0 152 38.8
Cc00_g25440 Coffea canephora HOM05D008092 ORTHO05D010277 2.9e-15 85.9 113 42.5
Lsat_1_v5_gn_4_183520 Lactuca sativa HOM05D008092 ORTHO05D010277 2.8e-13 79.3 159 34.0
Lalb_Chr02g0156941 Lupinus albus HOM05D008092 ORTHO05D010277 2.8e-13 79.3 119 43.7
Lj2g0022146 Lotus japonicus HOM05D008092 ORTHO05D010277 3.6e-13 79.0 120 43.3
Glyma.19G005600 Glycine max HOM05D008092 ORTHO05D010277 2.3e-12 76.3 115 42.6
Eucgr.I01759 Eucalyptus grandis HOM05D008092 ORTHO05D010277 3.0e-12 75.9 59 62.7
Psat1g056120 Pisum sativum HOM05D008092 ORTHO05D010277 3.0e-12 75.9 150 38.7
Sc03g0007590 Simmondsia chinensis HOM05D008092 ORTHO05D010277 4.0e-12 75.5 119 39.5
HanXRQChr09g0255051 Helianthus annuus HOM05D008092 ORTHO05D010277 8.9e-12 74.3 156 33.3
Cpa.g.sc108.51 Carica papaya HOM05D008092 ORTHO05D010277 1.5e-11 73.6 155 36.8
Nitab4.5_0000118g0190 Nicotiana tabacum HOM05D008092 ORTHO05D010277 1.5e-11 73.6 152 35.5
TPR.G14075 Trifolium pratense HOM05D008092 ORTHO05D010277 2.0e-11 73.2 151 37.7
Nitab4.5_0002306g0010 Nicotiana tabacum HOM05D008092 ORTHO05D010277 4.4e-11 72.0 113 39.8
TPR.G15211 Trifolium pratense HOM05D008092 ORTHO05D010277 4.4e-11 72.0 112 42.9
Eucgr.I01763 Eucalyptus grandis HOM05D008092 ORTHO05D010277 5.7e-11 71.6 59 61.0
CDE02G4384 Ceratophyllum demersum HOM05D008092 ORTHO05D010277 1.7e-10 70.1 129 37.2
Medtr6g005430 Medicago truncatula HOM05D008092 ORTHO05D010277 1.8e-09 66.6 161 33.5
Oeu063467.1 Olea europaea HOM05D008092 ORTHO05D010277 1.2e-08 63.9 159 34.0
ECA232G1487 Erigeron canadensis HOM05D008092 ORTHO05D010277 1.9e-06 56.6 113 36.3
SEGI_08853 Sequoiadendron giganteum HOM05D008092 ORTHO05D004758 3.3e-06 55.8 149 31.5


User provided reference genes

Program Settings