Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_14720 Corylus avellana HOM05D002296 ORTHO05D002360 1.3e-66 256.1 118 100.0
Haze_14713 Corylus avellana HOM05D002296 ORTHO05D002360 6.4e-26 120.9 55 100.0
GSVIVG01032517001 Vitis vinifera HOM05D002296 ORTHO05D002360 1.3e-13 80.1 43 76.7
Actinidia36068 Actinidia chinensis HOM05D002296 ORTHO05D002360 3.7e-13 78.6 43 76.7
Haze_14643 Corylus avellana HOM05D002296 ORTHO05D002360 6.2e-13 77.8 47 68.1
QL02p077412 Quercus lobata HOM05D002296 ORTHO05D002360 6.2e-13 77.8 45 71.1
ECA238G3042 Erigeron canadensis HOM05D002296 ORTHO05D002360 8.1e-13 77.4 45 73.3
CiPaw.04G023300 Carya illinoinensis HOM05D002296 ORTHO05D002360 1.1e-12 77.0 45 73.3
Phvul.004G018900 Phaseolus vulgaris HOM05D002296 ORTHO05D002360 1.1e-12 77.0 45 73.3
CSS0046078 Camellia sinensis var. sinensis HOM05D002296 ORTHO05D002360 1.8e-12 76.3 45 73.3
Oeu047324.1 Olea europaea HOM05D002296 ORTHO05D002360 1.8e-12 76.3 43 74.4
VMungo0464G0236 Vigna mungo HOM05D002296 ORTHO05D002360 1.8e-12 76.3 45 73.3
GSVIVG01032513001 Vitis vinifera HOM05D002296 ORTHO05D002360 2.4e-12 75.9 43 72.1
CiPaw.04G023200 Carya illinoinensis HOM05D002296 ORTHO05D002360 3.1e-12 75.5 45 68.9
CDE07G1863 Ceratophyllum demersum HOM05D002296 ORTHO05D002360 3.1e-12 75.5 45 68.9
Actinidia36069 Actinidia chinensis HOM05D002296 ORTHO05D002360 4.0e-12 75.1 43 74.4
Ciclev10014579m.g Citrus clementina HOM05D002296 ORTHO05D002360 4.0e-12 75.1 45 71.1
Manes.15G179900 Manihot esculenta HOM05D002296 ORTHO05D002360 4.0e-12 75.1 47 68.1
Potri.008G106400 Populus trichocarpa HOM05D002296 ORTHO05D002360 4.0e-12 75.1 43 69.8
COL.COLO4_32008 Corchorus olitorius HOM05D002296 ORTHO05D002360 5.3e-12 74.7 45 66.7
Glyma.19G011800 Glycine max HOM05D002296 ORTHO05D002360 5.3e-12 74.7 45 71.1
Thecc.04G005000 Theobroma cacao HOM05D002296 ORTHO05D002360 5.3e-12 74.7 45 66.7
vmacro05799 Vaccinium macrocarpon HOM05D002296 ORTHO05D002360 5.3e-12 74.7 43 72.1
arahy.Tifrunner.gnm1.ann1.VW8XB4 Arachis hypogaea HOM05D002296 ORTHO05D002360 6.9e-12 74.3 45 66.7
Manes.17G124300 Manihot esculenta HOM05D002296 ORTHO05D002360 6.9e-12 74.3 43 69.8
QL02p077436 Quercus lobata HOM05D002296 ORTHO05D002360 6.9e-12 74.3 43 72.1
ECA238G4305 Erigeron canadensis HOM05D002296 ORTHO05D002360 9.0e-12 73.9 42 73.8
Glyma.19G011700 Glycine max HOM05D002296 ORTHO05D002360 9.0e-12 73.9 45 73.3
CSS0007924 Camellia sinensis var. sinensis HOM05D002296 ORTHO05D002360 1.2e-11 73.6 42 76.2
CSS0009039 Camellia sinensis var. sinensis HOM05D002296 ORTHO05D002360 1.2e-11 73.6 42 76.2
Cfa007456 Carpinus fangiana HOM05D002296 ORTHO05D002360 1.2e-11 73.6 43 69.8
Cfa007457 Carpinus fangiana HOM05D002296 ORTHO05D002360 1.2e-11 73.6 43 69.8
Haze_14646 Corylus avellana HOM05D002296 ORTHO05D002360 1.2e-11 73.6 43 69.8
Medtr6g007767 Medicago truncatula HOM05D002296 ORTHO05D002360 1.2e-11 73.6 45 68.9
Nn3g16953 Nelumbo nucifera HOM05D002296 ORTHO05D002360 1.2e-11 73.6 43 72.1
QL02p077598 Quercus lobata HOM05D002296 ORTHO05D002360 1.5e-11 73.2 45 66.7
Cc07_g02500 Coffea canephora HOM05D002296 ORTHO05D002360 2.0e-11 72.8 45 66.7
Glyma.13G070900 Glycine max HOM05D002296 ORTHO05D002360 2.0e-11 72.8 45 71.1
Lsat_1_v5_gn_2_92600 Lactuca sativa HOM05D002296 ORTHO05D002360 2.0e-11 72.8 45 68.9
Medtr6g007770 Medicago truncatula HOM05D002296 ORTHO05D002360 2.0e-11 72.8 45 68.9
Psat1g095120 Pisum sativum HOM05D002296 ORTHO05D002360 2.0e-11 72.8 45 66.7
ClCG10G014450 Citrullus lanatus HOM05D002296 ORTHO05D002360 2.6e-11 72.4 45 68.9
CsaV3_3G042140 Cucumis sativus L. HOM05D002296 ORTHO05D002360 2.6e-11 72.4 45 68.9
MELO3C009932.2 Cucumis melo HOM05D002296 ORTHO05D002360 4.5e-11 71.6 45 66.7
CsaV3_3G042130 Cucumis sativus L. HOM05D002296 ORTHO05D002360 4.5e-11 71.6 45 68.9
TPR.G2312 Trifolium pratense HOM05D002296 ORTHO05D002426 4.5e-11 71.6 43 65.1
MELO3C009933.2 Cucumis melo HOM05D002296 ORTHO05D002360 5.8e-11 71.2 45 66.7
Sopen02g031840 Solanum pennellii HOM05D000004 ORTHO05D002360 5.8e-11 71.2 43 69.8
PGSC0003DMG401000506 Solanum tuberosum HOM05D002296 ORTHO05D002360 5.8e-11 71.2 43 69.8
TPR.G2326 Trifolium pratense HOM05D002296 ORTHO05D002360 5.8e-11 71.2 45 64.4
Lsat_1_v5_gn_2_92640 Lactuca sativa HOM05D002296 ORTHO05D002360 7.6e-11 70.9 43 69.8
Lalb_Chr02g0159701 Lupinus albus HOM05D002296 ORTHO05D002360 7.6e-11 70.9 45 66.7
Lalb_Chr06g0176381 Lupinus albus HOM05D002296 ORTHO05D002360 7.6e-11 70.9 45 64.4
Nn3g16954 Nelumbo nucifera HOM05D002296 ORTHO05D002360 7.6e-11 70.9 43 72.1
SEGI_04959 Sequoiadendron giganteum HOM05D002296 ORTHO05D002360 7.6e-11 70.9 45 64.4
TAR629G0435 Trochodendron aralioides HOM05D002296 ORTHO05D002360 7.6e-11 70.9 45 64.4
Gohir.1Z049361 Gossypium hirsutum HOM05D002296 ORTHO05D002360 9.9e-11 70.5 45 62.2
Gohir.D04G069701 Gossypium hirsutum HOM05D002296 ORTHO05D002360 9.9e-11 70.5 45 62.2
Gohir.D04G086201 Gossypium hirsutum HOM05D002296 ORTHO05D002360 9.9e-11 70.5 45 62.2
Gorai.012G059800 Gossypium raimondii HOM05D002296 ORTHO05D002360 9.9e-11 70.5 45 62.2
Hma1.2p1_0697F.1_g204920 Hydrangea macrophylla HOM05D002296 ORTHO05D002360 9.9e-11 70.5 40 70.0
Hma1.2p1_0967F.1_g242370 Hydrangea macrophylla HOM05D002296 ORTHO05D002360 9.9e-11 70.5 43 69.8
Hma1.2p1_0967F.1_g242380 Hydrangea macrophylla HOM05D002296 ORTHO05D002360 9.9e-11 70.5 43 69.8
Hma1.2p1_2931F.1_g330491 Hydrangea macrophylla HOM05D002296 ORTHO05D002360 9.9e-11 70.5 43 69.8
Oeu047321.1 Olea europaea HOM05D002296 ORTHO05D002360 9.9e-11 70.5 45 62.2
Peaxi162Scf00129g00943 Petunia axillaris HOM05D002296 ORTHO05D002360 9.9e-11 70.5 43 69.8
Sed0020638 Sechium edule HOM05D002296 ORTHO05D002360 9.9e-11 70.5 45 64.4
Aqoxy3G03058_Aqoxy3G03059 Aquilegia oxysepala HOM05D002296 ORTHO05D002360 1.3e-10 70.1 43 67.4
HanXRQChr12g0385531 Helianthus annuus HOM05D002296 ORTHO05D002360 1.3e-10 70.1 45 66.7
Nitab4.5_0007254g0050 Nicotiana tabacum HOM05D002296 ORTHO05D002360 1.3e-10 70.1 43 69.8
Sabra08G0080100 Salix brachista HOM05D002296 ORTHO05D002360 1.3e-10 70.1 40 72.5
CAN.G206.48 Capsicum annuum HOM05D002296 ORTHO05D002360 1.7e-10 69.7 43 67.4
Haze_14638 Corylus avellana HOM05D002296 ORTHO05D002360 1.7e-10 69.7 43 67.4
Haze_14642 Corylus avellana HOM05D002296 ORTHO05D002360 1.7e-10 69.7 43 67.4
Psat1g060840 Pisum sativum HOM05D002296 ORTHO05D002360 1.7e-10 69.7 45 64.4
Solyc02g087090.4 Solanum lycopersicum HOM05D002296 ORTHO05D002360 1.7e-10 69.7 43 67.4
CAN.G206.49 Capsicum annuum HOM05D002296 ORTHO05D002360 2.2e-10 69.3 43 65.1
Lj2g0017950 Lotus japonicus HOM05D002296 ORTHO05D002360 2.2e-10 69.3 45 62.2
Ciclev10014631m.g Citrus clementina HOM05D002296 ORTHO05D002360 2.9e-10 68.9 45 64.4
CANSAT64G0823 Cannabis sativa HOM05D002296 ORTHO05D002360 3.8e-10 68.6 45 62.2
PSO832G0655 Papaver somniferum HOM05D002296 ORTHO05D002360 3.8e-10 68.6 45 62.2
TPR.G36505 Trifolium pratense HOM05D002296 ORTHO05D002360 3.8e-10 68.6 45 64.4
Carub.0003s0068 Capsella rubella HOM05D002296 ORTHO05D002360 4.9e-10 68.2 61 52.5
ECA238G3856 Erigeron canadensis HOM05D002296 ORTHO05D002360 6.4e-10 67.8 46 60.9
Gohir.D04G053200 Gossypium hirsutum HOM05D002296 ORTHO05D002360 6.4e-10 67.8 43 65.1
arahy.Tifrunner.gnm1.ann1.91ADXD Arachis hypogaea HOM05D002296 ORTHO05D002360 8.4e-10 67.4 44 61.4
arahy.Tifrunner.gnm1.ann1.N6QIR7 Arachis hypogaea HOM05D002296 ORTHO05D002360 8.4e-10 67.4 44 61.4
CAN.G206.50 Capsicum annuum HOM05D002296 ORTHO05D002360 8.4e-10 67.4 43 62.8
CAN.G206.47 Capsicum annuum HOM05D002296 ORTHO05D002360 1.1e-09 67.0 43 62.8
Nitab4.5_0001952g0110 Nicotiana tabacum HOM05D002296 ORTHO05D002360 1.1e-09 67.0 43 67.4
Aa31LG5G10520 Aethionema arabicum HOM05D002296 ORTHO05D002360 1.4e-09 66.6 45 62.2
BcaC05g30008 Brassica carinata HOM05D002296 ORTHO05D002360 3.2e-09 65.5 45 62.2
C05p62000 Brassica napus HOM05D002296 ORTHO05D002360 3.2e-09 65.5 45 62.2
BolC5t34860H Brassica oleracea HOM05D002296 ORTHO05D002360 3.2e-09 65.5 45 62.2
CARHR075550 Cardamine hirsuta HOM05D002296 ORTHO05D002360 3.2e-09 65.5 48 58.3
Gohir.A05G361000 Gossypium hirsutum HOM05D002296 ORTHO05D002360 3.2e-09 65.5 43 62.8
Carub.0008s0840 Capsella rubella HOM05D002296 ORTHO05D002360 4.2e-09 65.1 61 49.2
Ca_04213_v3 Cicer arietinum L. HOM05D002296 ORTHO05D002360 4.2e-09 65.1 38 71.1
AL3G10760 Arabidopsis lyrata HOM05D002296 ORTHO05D002360 5.5e-09 64.7 45 60.0
AT3G01420 Arabidopsis thaliana HOM05D002296 ORTHO05D002360 5.5e-09 64.7 43 60.5
Gorai.012G059700 Gossypium raimondii HOM05D002296 ORTHO05D002360 5.5e-09 64.7 43 62.8
BcaB05g25033 Brassica carinata HOM05D002296 ORTHO05D002360 7.1e-09 64.3 45 60.0
Nitab4.5_0007254g0040 Nicotiana tabacum HOM05D002296 ORTHO05D002360 7.1e-09 64.3 43 65.1
PGSC0003DMG400000505 Solanum tuberosum HOM05D002296 ORTHO05D002360 7.1e-09 64.3 43 60.5
arahy.Tifrunner.gnm1.ann1.326DW3 Arachis hypogaea HOM05D002296 ORTHO05D002360 9.3e-09 63.9 39 66.7
A05p44580 Brassica napus HOM05D002296 ORTHO05D002360 9.3e-09 63.9 45 60.0
C09p75170 Brassica napus HOM05D002296 ORTHO05D002360 9.3e-09 63.9 45 60.0
BolC5t35147H Brassica oleracea HOM05D002296 ORTHO05D002360 9.3e-09 63.9 45 60.0
BraA05t23198Z Brassica rapa HOM05D002296 ORTHO05D002360 9.3e-09 63.9 45 60.0
MBI16_g18977_MAGBIO Magnolia biondii HOM05D002296 ORTHO05D002360 9.3e-09 63.9 42 64.3
Medtr6g007763 Medicago truncatula HOM05D002296 ORTHO05D002360 9.3e-09 63.9 45 57.8
Aa31LG11G9490 Aethionema arabicum HOM05D002296 ORTHO05D002360 1.2e-08 63.5 45 60.0
A06p07150 Brassica napus HOM05D002296 ORTHO05D002360 1.2e-08 63.5 45 60.0
A06p07200 Brassica napus HOM05D002296 ORTHO05D002360 1.2e-08 63.5 45 60.0
Peaxi162Scf00129g00942 Petunia axillaris HOM05D002296 ORTHO05D002360 1.2e-08 63.5 42 61.9
Sopen02g031830 Solanum pennellii HOM05D002296 ORTHO05D002360 1.2e-08 63.5 43 58.1
BcaC05g30468 Brassica carinata HOM05D002296 ORTHO05D002360 1.6e-08 63.2 45 57.8
HanXRQChr12g0385541 Helianthus annuus HOM05D002296 ORTHO05D002360 2.7e-08 62.4 39 69.2
Duzib264G0895 Durio zibethinus HOM05D002296 ORTHO05D002360 3.5e-08 62.0 44 59.1
MBI16_g18975_MAGBIO Magnolia biondii HOM05D002296 ORTHO05D002360 3.5e-08 62.0 42 64.3
CsaV3_3G042120 Cucumis sativus L. HOM05D002296 ORTHO05D002360 4.6e-08 61.6 45 53.3
Psat1g060760 Pisum sativum HOM05D002296 ORTHO05D002360 7.9e-08 60.8 43 58.1
THA.LOC104822381 Tarenaya hassleriana HOM05D002296 ORTHO05D002360 7.9e-08 60.8 45 57.8
SEGI_20972 Sequoiadendron giganteum HOM05D002296 ORTHO05D002360 1.0e-07 60.5 46 58.7
Thhalv10020279m.g Eutrema salsugineum HOM05D002296 ORTHO05D002360 1.3e-07 60.1 45 55.6
Phvul.004G019000 Phaseolus vulgaris HOM05D002296 ORTHO05D002360 1.3e-07 60.1 43 58.1
HanXRQChr14g0449991 Helianthus annuus HOM05D002296 ORTHO05D002360 1.8e-07 59.7 45 57.8
SalBow1G6069 Salvia bowleyana HOM05D002296 ORTHO05D002360 2.3e-07 59.3 42 59.5
Sp3g00640 Schrenkiella parvula HOM05D002296 ORTHO05D002360 3.0e-07 58.9 45 55.6
ClCG10G014460 Citrullus lanatus HOM05D002296 ORTHO05D002360 3.9e-07 58.5 45 53.3
HanXRQChr14g0450071 Helianthus annuus HOM05D002296 ORTHO05D002360 3.9e-07 58.5 45 55.6
Os12g0448900 Oryza sativa ssp. japonica HOM05D002296 ORTHO05D002360 5.1e-07 58.2 44 54.5
HanXRQChr14g0450041 Helianthus annuus HOM05D002296 ORTHO05D002360 1.1e-06 57.0 45 53.3
ATR1149G078 Amborella trichopoda HOM05D002296 ORTHO05D002360 4.3e-06 55.1 40 55.0
MBI16_g18980_MAGBIO Magnolia biondii HOM05D002296 ORTHO05D002360 4.3e-06 55.1 40 60.0
ECA238G4696 Erigeron canadensis HOM05D002296 ORTHO05D002360 5.6e-06 54.7 37 59.5


User provided reference genes

Program Settings