Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_14716 Corylus avellana HOM05D008092 ORTHO05D010277 1.4e-142 509.6 254 100.0
Haze_14721 Corylus avellana HOM05D008092 ORTHO05D010277 2.6e-72 276.2 156 93.6
Cfa007393 Carpinus fangiana HOM05D008092 ORTHO05D010277 8.5e-68 261.2 165 86.1
QL93p1842_0091 Quercus lobata HOM05D008092 ORTHO05D010277 6.6e-52 208.4 179 67.0
CiPaw.02G035400 Carya illinoinensis HOM05D008092 ORTHO05D010277 8.6e-52 208.0 181 66.9
QL02p075225 Quercus lobata HOM05D008092 ORTHO05D010277 3.3e-51 206.1 179 66.5
CiPaw.03G041800 Carya illinoinensis HOM05D008092 ORTHO05D010277 9.5e-51 204.5 181 65.7
CiPaw.04G027500 Carya illinoinensis HOM05D008092 ORTHO05D010277 3.1e-41 172.9 157 63.7
Dinv33463 Davidia involucrata HOM05D008092 ORTHO05D010277 1.2e-32 144.4 161 54.0
TAR374G1215 Trochodendron aralioides HOM05D008092 ORTHO05D010277 7.8e-29 131.7 172 48.8
GSVIVG01032429001 Vitis vinifera HOM05D008092 ORTHO05D010277 2.3e-28 130.2 167 46.7
Atru.chr6.2355 Acer truncatum HOM05D008092 ORTHO05D010277 2.1e-26 123.6 162 52.5
CSS0000484 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 5.8e-24 115.5 172 47.1
Manes.17G115000 Manihot esculenta HOM05D008092 ORTHO05D010277 1.7e-23 114.0 169 45.0
CSS0015151 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 1.1e-22 111.3 172 45.9
CANSAT64G0606 Cannabis sativa HOM05D008092 ORTHO05D010277 1.1e-22 111.3 172 40.7
Duzib187G1326 Durio zibethinus HOM05D008092 ORTHO05D010277 2.4e-22 110.2 174 42.5
Gohir.A10G102700 Gossypium hirsutum HOM05D008092 ORTHO05D010277 2.4e-22 110.2 178 42.7
Prupe.3G289300 Prunus persica HOM05D008092 ORTHO05D010277 7.1e-22 108.6 164 43.9
TWI36G1451 Tripterygium wilfordii HOM05D008092 ORTHO05D010277 7.1e-22 108.6 139 53.2
Gohir.D10G086900 Gossypium hirsutum HOM05D008092 ORTHO05D010277 1.2e-21 107.8 174 42.5
Gorai.011G095100 Gossypium raimondii HOM05D008092 ORTHO05D010277 3.5e-21 106.3 174 42.0
Thecc.04G015000 Theobroma cacao HOM05D008092 ORTHO05D010277 1.3e-20 104.4 162 42.6
vmacro05852 Vaccinium macrocarpon HOM05D008092 ORTHO05D010277 5.1e-20 102.4 157 43.3
Phvul.004G010900 Phaseolus vulgaris HOM05D008092 ORTHO05D010277 1.5e-19 100.9 158 41.8
arahy.Tifrunner.gnm1.ann1.M07V8F Arachis hypogaea HOM05D008092 ORTHO05D010277 2.5e-19 100.1 186 43.0
arahy.Tifrunner.gnm1.ann1.KZ8L38 Arachis hypogaea HOM05D008092 ORTHO05D010277 3.3e-19 99.8 190 42.6
VMungo0464G1885 Vigna mungo HOM05D008092 ORTHO05D010277 3.3e-19 99.8 187 38.0
PGR083G2137 Punica granatum HOM05D008092 ORTHO05D010277 7.3e-19 98.6 169 41.4
MD17G1030500 Malus domestica HOM05D008092 ORTHO05D010277 1.4e-17 94.4 161 42.9
COL.COLO4_29084 Corchorus olitorius HOM05D008092 ORTHO05D010277 2.4e-17 93.6 160 40.0
MBI10_g33304_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 4.0e-17 92.8 176 38.1
Rhsim10G0018500 Rhododendron simsii HOM05D008092 ORTHO05D010277 5.3e-17 92.4 186 38.2
Actinidia06006 Actinidia chinensis HOM05D008092 ORTHO05D010277 9.0e-17 91.7 163 41.1
Glyma.05G005000 Glycine max HOM05D008092 ORTHO05D010277 5.8e-16 89.0 176 38.6
Cc00_g25440 Coffea canephora HOM05D008092 ORTHO05D010277 1.7e-15 87.4 119 42.0
MELO3C009977.2 Cucumis melo HOM05D008092 ORTHO05D010277 1.4e-14 84.3 170 37.6
Lj2g0022146 Lotus japonicus HOM05D008092 ORTHO05D010277 1.4e-14 84.3 174 38.5
Lalb_Chr02g0156941 Lupinus albus HOM05D008092 ORTHO05D010277 1.4e-14 84.3 122 44.3
MBI10_g44380_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 1.4e-14 84.3 171 37.4
CsaV3_3G042670 Cucumis sativus L. HOM05D008092 ORTHO05D010277 3.2e-14 83.2 160 38.1
Nitab4.5_0000118g0190 Nicotiana tabacum HOM05D008092 ORTHO05D010277 2.7e-13 80.1 156 37.8
TPR.G14075 Trifolium pratense HOM05D008092 ORTHO05D010277 2.7e-13 80.1 190 35.3
Lsat_1_v5_gn_4_183520 Lactuca sativa HOM05D008092 ORTHO05D010277 4.6e-13 79.3 164 34.1
Nitab4.5_0002306g0010 Nicotiana tabacum HOM05D008092 ORTHO05D010277 2.3e-12 77.0 149 38.9
Psat1g056120 Pisum sativum HOM05D008092 ORTHO05D010277 3.0e-12 76.6 191 35.6
Eucgr.I01759 Eucalyptus grandis HOM05D008092 ORTHO05D010277 3.9e-12 76.3 64 57.8
Glyma.19G005600 Glycine max HOM05D008092 ORTHO05D010277 6.7e-12 75.5 121 40.5
TPR.G15211 Trifolium pratense HOM05D008092 ORTHO05D010277 6.7e-12 75.5 116 43.1
Eucgr.I01763 Eucalyptus grandis HOM05D008092 ORTHO05D010277 7.4e-11 72.0 64 56.2
Sc03g0007590 Simmondsia chinensis HOM05D008092 ORTHO05D010277 9.6e-11 71.6 121 38.0
Cpa.g.sc108.51 Carica papaya HOM05D008092 ORTHO05D010277 1.3e-10 71.2 192 38.5
Medtr6g005430 Medicago truncatula HOM05D008092 ORTHO05D010277 3.6e-10 69.7 188 32.4
HanXRQChr09g0255051 Helianthus annuus HOM05D008092 ORTHO05D010277 6.2e-10 68.9 116 37.9
ECA232G1487 Erigeron canadensis HOM05D008092 ORTHO05D010277 4.0e-09 66.2 187 33.7
CDE02G4384 Ceratophyllum demersum HOM05D008092 ORTHO05D010277 6.9e-09 65.5 133 36.1
Oeu063467.1 Olea europaea HOM05D008092 ORTHO05D010277 5.8e-08 62.4 163 32.5
DCAR_021714 Daucus carota HOM05D008092 ORTHO05D010277 3.8e-07 59.7 79 43.0


User provided reference genes

Program Settings