Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_14687 Corylus avellana HOM05D005169 ORTHO05D006436 6.6e-151 537.3 270 100.0
Cfa007415 Carpinus fangiana HOM05D005169 ORTHO05D006436 3.0e-87 325.9 172 95.3
CiPaw.03G039400 Carya illinoinensis HOM05D005169 ORTHO05D006436 1.1e-62 244.2 175 76.6
Dinv35078 Davidia involucrata HOM05D005169 ORTHO05D006436 5.4e-52 208.8 176 64.8
Potri.001G349700 Populus trichocarpa HOM05D005169 ORTHO05D006436 2.2e-50 203.4 177 63.3
QL02p075994 Quercus lobata HOM05D005169 ORTHO05D006436 2.9e-50 203.0 189 67.7
Dinv33480 Davidia involucrata HOM05D005169 ORTHO05D006436 5.0e-50 202.2 177 62.7
TAR622G1423 Trochodendron aralioides HOM05D005169 ORTHO05D006436 8.0e-48 194.9 176 61.9
TAR629G1679 Trochodendron aralioides HOM05D005169 ORTHO05D006436 5.2e-47 192.2 173 62.4
Sabra16G0229100 Salix brachista HOM05D005169 ORTHO05D006436 2.2e-45 186.8 179 61.5
Actinidia36094 Actinidia chinensis HOM05D005169 ORTHO05D006436 4.1e-44 182.6 180 56.1
COL.COLO4_28998 Corchorus olitorius HOM05D005169 ORTHO05D006436 3.5e-43 179.5 192 56.8
MD17G1033200 Malus domestica HOM05D005169 ORTHO05D006436 2.3e-42 176.8 165 57.6
vmacro05837 Vaccinium macrocarpon HOM05D005169 ORTHO05D006436 5.6e-41 172.2 181 56.4
Prupe.3G286300 Prunus persica HOM05D005169 ORTHO05D006436 9.5e-41 171.4 187 56.7
Thecc.04G011300 Theobroma cacao HOM05D005169 ORTHO05D006436 2.1e-40 170.2 183 56.3
CSS0037801 Camellia sinensis var. sinensis HOM05D005169 ORTHO05D006436 3.0e-39 166.4 179 53.6
Lju41C36T6 Lonicera japonica HOM05D005169 ORTHO05D006436 1.5e-38 164.1 174 55.7
Gorai.006G030600 Gossypium raimondii HOM05D005169 ORTHO05D006436 4.4e-38 162.5 166 57.8
Gohir.A09G026900 Gossypium hirsutum HOM05D005169 ORTHO05D006436 3.7e-37 159.5 182 55.5
Gohir.D09G026600 Gossypium hirsutum HOM05D005169 ORTHO05D006436 3.7e-37 159.5 182 54.9
CsaV3_5G027330 Cucumis sativus L. HOM05D005169 ORTHO05D005030 8.3e-37 158.3 176 51.7
Cc07_g02080 Coffea canephora HOM05D005169 ORTHO05D006436 1.8e-36 157.1 205 47.8
MELO3C021551.2 Cucumis melo HOM05D005169 ORTHO05D006436 3.2e-36 156.4 157 56.7
THA.LOC104821080 Tarenaya hassleriana HOM05D005169 ORTHO05D006436 3.2e-36 156.4 181 53.0
ClCG09G019030 Citrullus lanatus HOM05D005169 ORTHO05D006436 9.2e-36 154.8 176 52.3
Rhsim10G0020400 Rhododendron simsii HOM05D005169 ORTHO05D006256 1.6e-35 154.1 181 51.9
Nitab4.5_0002416g0060 Nicotiana tabacum HOM05D005169 ORTHO05D006436 2.0e-35 153.7 151 57.6
Nitab4.5_0002306g0060 Nicotiana tabacum HOM05D005169 ORTHO05D006436 3.5e-35 152.9 148 58.1
Atru.chr6.2317 Acer truncatum HOM05D005169 ORTHO05D006256 1.1e-33 147.9 156 54.5
Ciclev10016934m.g Citrus clementina HOM05D005169 ORTHO05D006436 1.1e-33 147.9 183 49.2
Gohir.A11G067000 Gossypium hirsutum HOM05D005169 ORTHO05D006436 1.1e-33 147.9 185 47.6
Manes.15G165700 Manihot esculenta HOM05D005169 ORTHO05D006436 1.1e-33 147.9 187 49.2
Nn3g16854 Nelumbo nucifera HOM05D005169 ORTHO05D006436 1.9e-33 147.1 177 52.0
FAN09G4345 Fragaria x ananassa HOM05D005169 ORTHO05D006436 5.6e-33 145.6 183 48.1
Peaxi162Scf00700g00522 Petunia axillaris HOM05D005169 ORTHO05D006436 9.5e-33 144.8 165 48.5
BolC9t59083H Brassica oleracea HOM05D005169 ORTHO05D006436 1.2e-32 144.4 205 44.9
Sed0004184 Sechium edule HOM05D005169 ORTHO05D006436 2.1e-32 143.7 176 48.9
Gohir.D11G070900 Gossypium hirsutum HOM05D005169 ORTHO05D006436 2.8e-32 143.3 184 46.2
Gorai.007G076200 Gossypium raimondii HOM05D005169 ORTHO05D006436 2.8e-32 143.3 184 46.2
BraA10t44462Z Brassica rapa HOM05D005169 ORTHO05D006436 3.6e-32 142.9 204 44.1
PGR142G3938 Punica granatum HOM05D005169 ORTHO05D006436 8.0e-32 141.7 186 50.5
A10p23980 Brassica napus HOM05D005169 ORTHO05D006436 1.0e-31 141.4 204 43.6
FvH4_6g50860 Fragaria vesca HOM05D005169 ORTHO05D006436 4.0e-31 139.4 167 48.5
FAN05G3636 Fragaria x ananassa HOM05D005169 ORTHO05D006436 5.2e-31 139.0 164 50.0
TWI56G0416 Tripterygium wilfordii HOM05D005169 ORTHO05D006436 1.2e-30 137.9 157 52.2
C09p62450 Brassica napus HOM05D005169 ORTHO05D006436 1.5e-30 137.5 187 46.0
Medtr6g406210 Medicago truncatula HOM05D005169 ORTHO05D006436 1.5e-30 137.5 174 48.9
Oeu014861.1 Olea europaea HOM05D005169 ORTHO05D006436 1.5e-30 137.5 145 50.3
BcaC03g13455 Brassica carinata HOM05D005169 ORTHO05D006436 4.4e-30 136.0 177 49.2
CARHR198620 Cardamine hirsuta HOM05D005169 ORTHO05D006436 4.4e-30 136.0 221 42.1
HanXRQChr09g0266101 Helianthus annuus HOM05D005169 ORTHO05D006436 5.8e-30 135.6 159 49.1
FAN14G0546 Fragaria x ananassa HOM05D005169 ORTHO05D006436 7.5e-30 135.2 166 47.6
PSO017G2305 Papaver somniferum HOM05D005169 ORTHO05D006436 9.8e-30 134.8 205 41.0
RcHm_v2.0_Chr2g0172251 Rosa chinensis HOM05D005169 ORTHO05D006436 9.8e-30 134.8 150 50.0
CARHR075420 Cardamine hirsuta HOM05D005169 ORTHO05D006436 1.3e-29 134.4 158 51.3
MBI16_g27097_MAGBIO Magnolia biondii HOM05D005169 ORTHO05D006436 2.2e-29 133.7 161 50.3
Peaxi162Scf00129g00124 Petunia axillaris HOM05D005169 ORTHO05D006436 2.2e-29 133.7 145 48.3
Oeu062928.1 Olea europaea HOM05D005169 ORTHO05D006436 4.9e-29 132.5 172 47.7
PSO478G0492 Papaver somniferum HOM05D005169 ORTHO05D006436 1.4e-28 131.0 214 40.7
MSTRG.3296 Avicennia marina HOM05D005169 ORTHO05D006436 1.9e-28 130.6 143 48.3
AUR62013741 Chenopodium quinoa HOM05D005169 ORTHO05D006436 4.1e-28 129.4 169 51.5
Psat1g056600 Pisum sativum HOM05D005169 ORTHO05D006436 5.4e-28 129.0 163 44.2
AUR62023410 Chenopodium quinoa HOM05D005169 ORTHO05D006436 7.0e-28 128.6 164 51.2
EL10Ac1g00764 Beta vulgaris HOM05D005169 ORTHO05D006436 9.2e-28 128.3 159 50.9
Hma1.2p1_0858F.1_g229310 Hydrangea macrophylla HOM05D005169 ORTHO05D006436 9.2e-28 128.3 177 43.5
Nitab4.5_0014517g0010 Nicotiana tabacum HOM05D005169 ORTHO05D006436 9.2e-28 128.3 203 40.9
Thhalv10021959m.g Eutrema salsugineum HOM05D005169 ORTHO05D006436 1.2e-27 127.9 178 47.2
Aa31LG5G10650 Aethionema arabicum HOM05D005169 ORTHO05D006436 3.5e-27 126.3 159 50.9
C09p75080 Brassica napus HOM05D005169 ORTHO05D006436 3.5e-27 126.3 174 46.6
BolC5t35156H Brassica oleracea HOM05D005169 ORTHO05D006436 3.5e-27 126.3 174 46.6
AL6G25460 Arabidopsis lyrata HOM05D005169 ORTHO05D006436 4.6e-27 125.9 222 40.5
AT3G01516 Arabidopsis thaliana HOM05D005169 ORTHO05D006436 4.6e-27 125.9 177 45.8
Carub.0003s0056 Capsella rubella HOM05D005169 ORTHO05D006436 4.6e-27 125.9 144 50.7
Psat1g056720 Pisum sativum HOM05D005169 ORTHO05D006436 4.6e-27 125.9 180 43.9
BcaC05g30410 Brassica carinata HOM05D005169 ORTHO05D006436 6.0e-27 125.6 174 46.6
Lsat_1_v5_gn_2_91781 Lactuca sativa HOM05D005169 ORTHO05D006436 6.0e-27 125.6 160 43.8
CANSAT64G1588 Cannabis sativa HOM05D005169 ORTHO05D006436 7.8e-27 125.2 167 47.3
Lsat_1_v5_gn_4_182740 Lactuca sativa HOM05D005169 ORTHO05D006436 1.0e-26 124.8 179 44.7
Lalb_Chr06g0175951 Lupinus albus HOM05D005169 ORTHO05D006436 1.0e-26 124.8 156 47.4
ECA232G1653 Erigeron canadensis HOM05D005169 ORTHO05D006436 2.3e-26 123.6 134 47.8
Migut.K01374 Erythranthe guttata HOM05D005169 ORTHO05D006436 3.0e-26 123.2 141 47.5
A05p44490 Brassica napus HOM05D005169 ORTHO05D006436 3.9e-26 122.9 177 46.9
BraA05t23207Z Brassica rapa HOM05D005169 ORTHO05D006436 3.9e-26 122.9 177 46.9
Oeu043043.1 Olea europaea HOM05D005169 ORTHO05D006436 3.9e-26 122.9 174 44.8
Migut.H00106 Erythranthe guttata HOM05D005169 ORTHO05D006436 5.0e-26 122.5 144 47.2
FAN05G4915 Fragaria x ananassa HOM05D005169 ORTHO05D006436 5.0e-26 122.5 175 41.1
Carub.0006s1286 Capsella rubella HOM05D005169 ORTHO05D006436 1.1e-25 121.3 230 39.6
Sp3g00540 Schrenkiella parvula HOM05D005169 ORTHO05D006436 1.9e-25 120.6 203 43.8
PGSC0003DMG400000520 Solanum tuberosum HOM05D005169 ORTHO05D006436 1.9e-25 120.6 172 43.0
AL3G10640 Arabidopsis lyrata HOM05D005169 ORTHO05D006436 3.3e-25 119.8 188 45.2
Solyc12g062840.1 Solanum lycopersicum HOM05D005169 ORTHO05D006436 3.3e-25 119.8 147 46.3
HanXRQChr07g0198841 Helianthus annuus HOM05D005169 ORTHO05D006436 4.3e-25 119.4 150 44.7
BcaNung03104 Brassica carinata HOM05D005169 ORTHO05D006436 5.6e-25 119.0 212 39.6
Ah.05g173110 Amaranthus hybridus HOM05D005169 ORTHO05D006436 9.5e-25 118.2 176 47.2
SHI27192 Sapria himalayana HOM05D005169 ORTHO05D006436 9.5e-25 118.2 162 46.9
BcaC05g30449 Brassica carinata HOM05D005169 ORTHO05D006436 1.6e-24 117.5 183 43.7
BraA02t05235Z Brassica rapa HOM05D005169 ORTHO05D006436 1.6e-24 117.5 210 41.4
Cpa.g.sc3104.1 Carica papaya HOM05D005169 ORTHO05D006436 2.8e-24 116.7 142 51.4
Lalb_Chr21g0319501 Lupinus albus HOM05D005169 ORTHO05D006436 2.8e-24 116.7 183 42.1
Sp6g29350 Schrenkiella parvula HOM05D005169 ORTHO05D006436 2.8e-24 116.7 216 37.0
DCAR_015051 Daucus carota HOM05D005169 ORTHO05D006436 6.2e-24 115.5 154 45.5
SGA_v2.0_scaffold135G34886 Striga asiatica HOM05D005169 ORTHO05D006436 6.2e-24 115.5 154 44.8
SalBow7G2461 Salvia bowleyana HOM05D005169 ORTHO05D006436 1.1e-23 114.8 154 48.1
Aa31LG11G14770 Aethionema arabicum HOM05D005169 ORTHO05D006436 1.4e-23 114.4 242 37.6
Solyc02g086760.1 Solanum lycopersicum HOM05D005169 ORTHO05D006436 3.1e-23 113.2 212 37.3
Sopen02g031520 Solanum pennellii HOM05D005169 ORTHO05D006436 4.0e-23 112.8 213 37.1
Thhalv10014646m.g Eutrema salsugineum HOM05D005169 ORTHO05D006436 8.9e-23 111.7 219 37.4
Glyma.05G006400 Glycine max HOM05D005169 ORTHO05D006436 8.9e-23 111.7 137 46.0
SGA_v2.0_scaffold30G12455 Striga asiatica HOM05D005169 ORTHO05D006436 4.4e-22 109.4 144 46.5
TPR.G35382 Trifolium pratense HOM05D005169 ORTHO05D006436 4.4e-22 109.4 122 48.4
PSO170G4554 Papaver somniferum HOM05D005169 ORTHO05D006436 9.8e-22 108.2 196 41.3
DCAR_021693 Daucus carota HOM05D005169 ORTHO05D006436 2.2e-21 107.1 143 46.9
Glyma.19G006800 Glycine max HOM05D005169 ORTHO05D006436 2.2e-21 107.1 166 40.4
TPR.G10806 Trifolium pratense HOM05D005169 ORTHO05D006436 3.7e-21 106.3 97 57.7
Sc16g0007930 Simmondsia chinensis HOM05D005169 ORTHO05D006436 1.1e-20 104.8 142 43.7
AT5G14690 Arabidopsis thaliana HOM05D005169 ORTHO05D006436 1.4e-20 104.4 216 35.2
ATR0730G202 Amborella trichopoda HOM05D005169 ORTHO05D006436 1.0e-18 98.2 132 45.5
Sopen12g026520 Solanum pennellii HOM05D005169 ORTHO05D006436 1.3e-18 97.8 89 53.9
PSO144G0121 Papaver somniferum HOM05D005169 ORTHO05D006436 6.6e-18 95.5 198 38.9
C02p07220 Brassica napus HOM05D005169 ORTHO05D006436 4.3e-17 92.8 113 50.4
BolC2t06654H Brassica oleracea HOM05D005169 ORTHO05D006436 4.3e-17 92.8 113 50.4
Duzib147G0144 Durio zibethinus HOM05D005169 ORTHO05D006436 1.6e-16 90.9 120 45.8
MD09G1031300 Malus domestica HOM05D005169 ORTHO05D006436 3.6e-16 89.7 103 55.3
Ah.03g141220 Amaranthus hybridus HOM05D005169 ORTHO05D006436 1.4e-15 87.8 92 51.1
Os01g0638800 Oryza sativa ssp. japonica HOM05D005169 ORTHO05D006436 1.3e-13 81.3 136 40.4
unitig_899.g15487 Utricularia gibba HOM05D005169 ORTHO05D006436 2.2e-13 80.5 128 39.8
HPP92_008039 Vanilla planifolia HOM05D005169 ORTHO05D006436 1.4e-12 77.8 163 35.6
HPP92_024720 Vanilla planifolia HOM05D005169 ORTHO05D006436 2.4e-12 77.0 131 40.5
Zm00001eb157680 Zea mays HOM05D005169 ORTHO05D006436 4.1e-12 76.3 174 36.2
Zm00001eb296260 Zea mays HOM05D005169 ORTHO05D006436 1.2e-11 74.7 136 40.4
CDE07G0703 Ceratophyllum demersum HOM05D005169 ORTHO05D006436 4.6e-11 72.8 122 37.7
SEGI_21704 Sequoiadendron giganteum HOM05D005169 ORTHO05D006436 2.1e-08 63.9 178 28.7
BcaC08g44071 Brassica carinata HOM05D005169 ORTHO05D006436 6.2e-08 62.4 63 57.1
SEGI_19138 Sequoiadendron giganteum HOM05D005169 ORTHO05D006436 3.1e-07 60.1 124 30.6
BcaC04g22405 Brassica carinata HOM05D005169 ORTHO05D006436 6.8e-07 58.9 63 55.6
C09p19720 Brassica napus HOM05D005169 ORTHO05D006436 6.8e-07 58.9 63 55.6
VMungo0464G1178 Vigna mungo HOM05D005169 ORTHO05D006436 8.9e-07 58.5 137 33.6
CDE06G1771 Ceratophyllum demersum HOM05D000110 ORTHO05D000024 2.6e-06 57.0 35 65.7
Phvul.004G012300 Phaseolus vulgaris HOM05D005169 ORTHO05D006436 3.4e-06 56.6 144 30.6
SEGI_22807 Sequoiadendron giganteum HOM05D005169 ORTHO05D006436 4.4e-06 56.2 149 28.2
CDE04G0766 Ceratophyllum demersum HOM05D005169 ORTHO05D006436 5.8e-06 55.8 35 65.7


User provided reference genes

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