Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_14633 Corylus avellana HOM05D013024 ORTHO05D015548 3.2e-99 365.2 192 100.0
Thecc.09G157300 Theobroma cacao HOM05D013024 ORTHO05D015548 3.8e-20 102.4 148 39.9
Thecc.09G156700 Theobroma cacao HOM05D013024 ORTHO05D015548 4.2e-19 99.0 148 39.9
Thecc.09G156200 Theobroma cacao HOM05D013024 ORTHO05D015548 5.5e-19 98.6 148 39.9
Cpa.g.sc199.5 Carica papaya HOM05D013024 ORTHO05D015548 4.9e-15 85.5 203 34.5
Nn2g12178 Nelumbo nucifera HOM05D002727 ORTHO05D002856 1.4e-14 84.0 142 40.8
Nn2g12179 Nelumbo nucifera HOM05D002727 ORTHO05D002856 4.1e-14 82.4 190 35.3
Manes.09G062812 Manihot esculenta HOM05D013024 ORTHO05D015548 1.2e-13 80.9 100 46.0
CANSAT11G2620 Cannabis sativa HOM05D013024 ORTHO05D015548 1.0e-12 77.8 157 40.1
Nn8g40139 Nelumbo nucifera HOM05D002727 ORTHO05D002856 1.7e-12 77.0 188 33.5
Nn8g39635 Nelumbo nucifera HOM05D002727 ORTHO05D002856 2.3e-12 76.6 141 36.9
Dinv42803 Davidia involucrata HOM05D002727 ORTHO05D002856 2.9e-12 76.3 136 35.3
Dinv43298 Davidia involucrata HOM05D002727 ORTHO05D002856 2.9e-12 76.3 136 35.3
Rhsim01G0018600 Rhododendron simsii HOM05D002727 ORTHO05D002856 5.0e-12 75.5 123 37.4
Nn8g40141 Nelumbo nucifera HOM05D002727 ORTHO05D002856 1.1e-11 74.3 184 34.2
Rhsim01G0019500 Rhododendron simsii HOM05D002727 ORTHO05D002856 1.1e-11 74.3 178 36.5
Nn8g39630 Nelumbo nucifera HOM05D002727 ORTHO05D002856 1.5e-11 73.9 141 37.6
Rhsim01G0018300 Rhododendron simsii HOM05D002727 ORTHO05D002856 1.5e-11 73.9 176 33.5
Nn8g40185 Nelumbo nucifera HOM05D002727 ORTHO05D002856 1.9e-11 73.6 186 32.8
Nn2g12182 Nelumbo nucifera HOM05D002727 ORTHO05D002856 2.5e-11 73.2 119 42.0
Aqoxy4G00561 Aquilegia oxysepala HOM05D002727 ORTHO05D002856 4.3e-11 72.4 177 32.2
Aqoxy4G00571 Aquilegia oxysepala HOM05D002727 ORTHO05D002856 4.3e-11 72.4 177 32.2
Thecc.09G157200 Theobroma cacao HOM05D013024 ORTHO05D015548 1.2e-10 70.9 154 35.1
Aqoxy4G00886 Aquilegia oxysepala HOM05D002727 ORTHO05D002856 1.6e-10 70.5 184 31.5
CANSAT21G1445 Cannabis sativa HOM05D013024 ORTHO05D015548 2.1e-10 70.1 95 44.2
Rhsim01G0020200 Rhododendron simsii HOM05D002727 ORTHO05D002856 2.1e-10 70.1 178 32.0
Dinv42800 Davidia involucrata HOM05D002727 ORTHO05D002856 3.6e-10 69.3 122 36.1
Dinv43301 Davidia involucrata HOM05D002727 ORTHO05D002856 3.6e-10 69.3 122 36.1
Nn8g40140 Nelumbo nucifera HOM05D002727 ORTHO05D002856 1.0e-09 67.8 184 31.0
Prupe.1G100500 Prunus persica HOM05D002727 ORTHO05D002856 5.2e-09 65.5 194 28.4
Thecc.09G156600 Theobroma cacao HOM05D013024 ORTHO05D015548 6.8e-09 65.1 153 32.7
QL02p098200 Quercus lobata HOM05D002727 ORTHO05D002856 8.9e-09 64.7 109 37.6
MD15G1046300 Malus domestica HOM05D002727 ORTHO05D002856 1.5e-08 63.9 147 32.7
GSVIVG01023712001 Vitis vinifera HOM05D002727 ORTHO05D002856 1.5e-08 63.9 144 33.3
TWI34G1383 Tripterygium wilfordii HOM05D002727 ORTHO05D002856 4.4e-08 62.4 145 35.2
Rhsim01G0020900 Rhododendron simsii HOM05D002727 ORTHO05D002856 5.8e-08 62.0 176 27.8
Thecc.09G156100 Theobroma cacao HOM05D013024 ORTHO05D015548 5.8e-08 62.0 153 31.4
Thecc.09G156800 Theobroma cacao HOM05D013024 ORTHO05D015548 5.8e-08 62.0 153 31.4
Prupe.1G100600 Prunus persica HOM05D002727 ORTHO05D002856 9.8e-08 61.2 126 28.6
Mapoly0033s0033 Marchantia polymorpha HOM05D005423 ORTHO05D006223 1.7e-07 60.5 138 29.0
Aqoxy3G02264 Aquilegia oxysepala HOM05D002727 ORTHO05D002856 6.4e-07 58.5 136 36.0
MD03G1107500 Malus domestica HOM05D002727 ORTHO05D002856 3.2e-06 56.2 109 33.0
MD03G1035100 Malus domestica HOM05D002727 ORTHO05D002856 5.4e-06 55.5 194 28.4


User provided reference genes

Program Settings