Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_14585 Corylus avellana HOM05D008333 ORTHO05D010371 1.3e-202 709.5 355 100.0
Cfa007508 Carpinus fangiana HOM05D008333 ORTHO05D010371 2.2e-74 283.5 161 90.1
Cfa021167 Carpinus fangiana HOM05D008333 ORTHO05D010371 4.0e-71 272.7 148 91.2
QL02p080535 Quercus lobata HOM05D008333 ORTHO05D010371 3.6e-40 169.9 124 66.1
CiPaw.03G030300 Carya illinoinensis HOM05D008333 ORTHO05D010371 9.2e-36 155.2 146 53.4
Prupe.3G272200 Prunus persica HOM05D008333 ORTHO05D010371 7.1e-28 129.0 134 48.5
Rhsim08G0065300 Rhododendron simsii HOM05D008333 ORTHO05D010371 1.6e-27 127.9 333 30.0
Potri.017G077100 Populus trichocarpa HOM05D008333 ORTHO05D010371 1.1e-25 121.7 136 50.0
Duzib147G0630 Durio zibethinus HOM05D008333 ORTHO05D010371 1.1e-23 115.2 137 42.3
FvH4_6g49300 Fragaria vesca HOM05D008333 ORTHO05D010371 6.9e-23 112.5 115 46.1
FvH4_6g49320 Fragaria vesca HOM05D008333 ORTHO05D010371 1.2e-22 111.7 115 46.1
FAN14G5614 Fragaria x ananassa HOM05D008333 ORTHO05D010371 1.2e-22 111.7 115 46.1
FAN14G1695 Fragaria x ananassa HOM05D008333 ORTHO05D010371 1.5e-22 111.3 115 46.1
FAN14G3781 Fragaria x ananassa HOM05D000349 ORTHO05D001782 1.5e-22 111.3 115 46.1
RcHm_v2.0_Chr2g0169181 Rosa chinensis HOM05D008333 ORTHO05D010371 1.5e-22 111.3 133 41.4
Glyma.18G255500 Glycine max HOM05D008333 ORTHO05D010371 2.0e-22 110.9 141 42.6
Manes.17G020900 Manihot esculenta HOM05D008333 ORTHO05D010371 2.2e-21 107.5 119 43.7
RcHm_v2.0_Chr2g0169171 Rosa chinensis HOM05D008333 ORTHO05D010371 3.8e-21 106.7 142 40.1
COL.COLO4_25183 Corchorus olitorius HOM05D008333 ORTHO05D010371 6.4e-21 105.9 143 38.5
VMungo0464G0738 Vigna mungo HOM05D008333 ORTHO05D010371 1.1e-20 105.1 145 40.0
Gorai.006G024100 Gossypium raimondii HOM05D008333 ORTHO05D010371 5.4e-20 102.8 110 42.7
Gohir.A09G021000 Gossypium hirsutum HOM05D008333 ORTHO05D010371 3.5e-19 100.1 110 40.9
TPR.G7262 Trifolium pratense HOM05D008333 ORTHO05D010371 6.0e-19 99.4 118 48.3
Thecc.04G074300 Theobroma cacao HOM05D008333 ORTHO05D010371 2.3e-18 97.4 127 44.1
Gorai.006G023800 Gossypium raimondii HOM05D008333 ORTHO05D010371 3.0e-18 97.1 108 40.7
Phvul.004G025900 Phaseolus vulgaris HOM05D008333 ORTHO05D010371 3.9e-18 96.7 117 41.0
Eucgr.I01914 Eucalyptus grandis HOM05D008333 ORTHO05D010371 1.9e-17 94.4 108 41.7
Gohir.D09G020400 Gossypium hirsutum HOM05D008333 ORTHO05D010371 3.3e-17 93.6 110 38.2
Eucgr.L02760 Eucalyptus grandis HOM05D008333 ORTHO05D010371 4.3e-17 93.2 108 40.7
Eucgr.I01916 Eucalyptus grandis HOM05D008333 ORTHO05D010371 9.6e-17 92.0 107 40.2
Rhsim08G0065700 Rhododendron simsii HOM05D008333 ORTHO05D010371 1.3e-16 91.7 118 41.5
Rhsim08G0065100 Rhododendron simsii HOM05D008333 ORTHO05D010371 1.6e-16 91.3 118 40.7
Rhsim08G0065500 Rhododendron simsii HOM05D008333 ORTHO05D010371 6.2e-16 89.4 117 41.9
CSS0029447 Camellia sinensis var. sinensis HOM05D008333 ORTHO05D010371 8.1e-16 89.0 109 39.4
CSS0048142 Camellia sinensis var. sinensis HOM05D008333 ORTHO05D010371 8.1e-16 89.0 109 39.4
Rhsim08G0065900 Rhododendron simsii HOM05D008333 ORTHO05D010371 1.1e-15 88.6 117 41.9
Gorai.007G297900 Gossypium raimondii HOM05D008333 ORTHO05D010371 1.8e-15 87.8 107 40.2
Lj7P401T71 Lonicera japonica HOM05D008333 ORTHO05D010371 3.1e-15 87.0 134 35.8
Rhsim08G0066000 Rhododendron simsii HOM05D008333 ORTHO05D010371 3.1e-15 87.0 115 42.6
Gohir.D11G275775 Gossypium hirsutum HOM05D008333 ORTHO05D010371 4.0e-15 86.7 107 40.2
Rhsim08G0065600 Rhododendron simsii HOM05D008333 ORTHO05D010371 9.0e-15 85.5 117 41.0
Gohir.D09G020550 Gossypium hirsutum HOM05D008333 ORTHO05D010371 1.5e-14 84.7 84 45.2
Nn4g23042 Nelumbo nucifera HOM05D008333 ORTHO05D010371 1.5e-14 84.7 140 39.3
Rhsim08G0065000 Rhododendron simsii HOM05D008333 ORTHO05D010371 2.0e-14 84.3 115 41.7
Rhsim08G0065800 Rhododendron simsii HOM05D008333 ORTHO05D010371 2.0e-14 84.3 115 40.9
Rhsim08G0065400 Rhododendron simsii HOM05D008333 ORTHO05D010371 2.6e-14 84.0 115 40.9
Rhsim08G0065200 Rhododendron simsii HOM05D008333 ORTHO05D010371 4.5e-14 83.2 113 41.6
TAR481G0013 Trochodendron aralioides HOM05D008333 ORTHO05D010371 2.9e-13 80.5 116 41.4
PGSC0003DMG400016257 Solanum tuberosum HOM05D008333 ORTHO05D010371 3.8e-13 80.1 103 39.8
TAR481G0008 Trochodendron aralioides HOM05D008333 ORTHO05D010371 8.4e-13 79.0 116 40.5
CSS0005469 Camellia sinensis var. sinensis HOM05D008333 ORTHO05D010371 1.1e-12 78.6 133 36.8
Actinidia38746 Actinidia chinensis HOM05D008333 ORTHO05D010371 2.4e-12 77.4 124 36.3
TAR371G0090 Trochodendron aralioides HOM05D008333 ORTHO05D010371 1.6e-11 74.7 136 35.3
Gohir.A11G265601 Gossypium hirsutum HOM05D008333 ORTHO05D010371 3.5e-11 73.6 107 36.4
Nn3g17126 Nelumbo nucifera HOM05D008333 ORTHO05D010371 1.9e-09 67.8 121 37.2
CSS0007512 Camellia sinensis var. sinensis HOM05D008333 ORTHO05D010371 4.3e-09 66.6 133 33.1
FAN02G4458 Fragaria x ananassa HOM05D008333 ORTHO05D010371 4.3e-09 66.6 92 41.3
VMungo0464G0892 Vigna mungo HOM05D036391 ORTHO05D035925 6.2e-08 62.8 117 35.0
Sopen04g006510 Solanum pennellii HOM05D008333 ORTHO05D010371 1.1e-07 62.0 99 34.3
Glyma.13G065300 Glycine max HOM05D036391 ORTHO05D035925 4.0e-07 60.1 139 29.5
Gorai.006G024300 Gossypium raimondii HOM05D008333 ORTHO05D010371 2.6e-06 57.4 71 32.4
Eucgr.L03696 Eucalyptus grandis HOM05D008333 ORTHO05D010371 4.5e-06 56.6 74 33.8


User provided reference genes

Program Settings