Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_14576 Corylus avellana HOM05D007272 ORTHO05D009305 2.7e-291 1004.6 493 100.0
Cfa007518 Carpinus fangiana HOM05D007272 ORTHO05D009305 2.2e-277 958.4 494 95.1
CiPaw.04G019400 Carya illinoinensis HOM05D007272 ORTHO05D009305 2.9e-213 745.3 498 74.1
QL02p080768 Quercus lobata HOM05D007272 ORTHO05D009305 6.3e-208 727.6 483 75.4
Potri.017G079100 Populus trichocarpa HOM05D007272 ORTHO05D009305 9.0e-207 723.8 494 73.7
Sabra17G0070200 Salix brachista HOM05D007272 ORTHO05D009305 2.5e-204 715.7 484 73.8
GSVIVG01011351001 Vitis vinifera HOM05D007272 ORTHO05D009305 7.4e-201 704.1 488 70.5
Manes.17G022200 Manihot esculenta HOM05D007272 ORTHO05D009305 2.5e-196 689.1 487 69.4
Actinidia23567 Actinidia chinensis HOM05D007272 ORTHO05D009305 6.7e-194 681.0 491 68.6
Ciclev10011541m.g Citrus clementina HOM05D007272 ORTHO05D009305 1.1e-193 680.2 492 68.7
TWI34G0655 Tripterygium wilfordii HOM05D007272 ORTHO05D009305 1.5e-193 679.9 489 69.1
Prupe.3G271100 Prunus persica HOM05D007272 ORTHO05D009305 2.2e-192 676.0 491 68.0
TAR629G0691 Trochodendron aralioides HOM05D007272 ORTHO05D009305 7.7e-190 667.5 492 66.9
Duzib187G0958 Durio zibethinus HOM05D007272 ORTHO05D009305 8.5e-189 664.1 493 67.7
vmacro05725 Vaccinium macrocarpon HOM05D007272 ORTHO05D009305 1.9e-188 662.9 483 66.7
Hma1.2p1_0449F.1_g155160 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 2.5e-188 662.5 487 67.1
Nn3g17142 Nelumbo nucifera HOM05D007272 ORTHO05D009305 1.6e-187 659.8 487 66.1
Thecc.04G075900 Theobroma cacao HOM05D007272 ORTHO05D009305 1.6e-187 659.8 492 67.1
QL02p080779 Quercus lobata HOM05D007272 ORTHO05D009305 1.8e-183 646.4 530 64.3
Gorai.006G025400 Gossypium raimondii HOM05D007272 ORTHO05D009305 1.6e-182 643.3 496 64.7
MD17G1048000 Malus domestica HOM05D007272 ORTHO05D009305 3.2e-180 635.6 497 64.0
Gohir.A09G022200 Gossypium hirsutum HOM05D007272 ORTHO05D009305 2.3e-178 629.4 496 64.1
PGR142G3376 Punica granatum HOM05D007272 ORTHO05D009305 4.4e-177 625.2 492 64.6
AUR62031636 Chenopodium quinoa HOM05D007272 ORTHO05D009305 4.1e-175 618.6 485 60.2
Cpa.g.sc14.36 Carica papaya HOM05D007272 ORTHO05D009305 4.5e-174 615.1 454 66.7
Sc10g0003770 Simmondsia chinensis HOM05D007272 ORTHO05D009305 1.0e-173 614.0 485 62.1
Ah.10g031300 Amaranthus hybridus HOM05D007272 ORTHO05D009305 2.9e-173 612.5 487 61.0
Glyma.13G064500 Glycine max HOM05D007272 ORTHO05D009305 1.5e-172 610.1 492 63.6
DCAR_021668 Daucus carota HOM05D007272 ORTHO05D009305 5.5e-172 608.2 487 60.2
RhsimUnG0199700 Rhododendron simsii HOM05D007272 ORTHO05D009305 1.2e-169 600.5 561 55.6
Phvul.004G026700 Phaseolus vulgaris HOM05D007272 ORTHO05D009305 1.5e-169 600.1 485 63.3
Hund13235 Selenicereus undatus HOM05D007272 ORTHO05D009305 3.4e-169 599.0 471 61.4
Gohir.D09G021400 Gossypium hirsutum HOM05D007272 ORTHO05D009305 5.7e-169 598.2 462 64.7
Lj7C400T1 Lonicera japonica HOM05D007272 ORTHO05D009305 1.3e-168 597.0 482 62.2
HanXRQChr14g0449311 Helianthus annuus HOM05D007272 ORTHO05D009305 4.8e-168 595.1 485 61.0
RcHm_v2.0_Chr2g0169041 Rosa chinensis HOM05D007272 ORTHO05D009305 7.0e-167 591.3 494 61.7
Ca_04270_v3 Cicer arietinum L. HOM05D007272 ORTHO05D009305 3.8e-165 585.5 488 60.7
RhsimUnG0056400 Rhododendron simsii HOM05D007272 ORTHO05D009305 3.8e-165 585.5 588 53.4
FvH4_6g49170 Fragaria vesca HOM05D007272 ORTHO05D009305 5.0e-165 585.1 485 62.1
FAN05G2713 Fragaria x ananassa HOM05D007272 ORTHO05D009305 3.3e-164 582.4 485 61.9
Lsat_1_v5_gn_2_88701 Lactuca sativa HOM05D007272 ORTHO05D009305 3.3e-164 582.4 491 60.3
FAN14G5197 Fragaria x ananassa HOM05D007272 ORTHO05D009305 4.2e-164 582.0 485 61.6
FAN02G2692 Fragaria x ananassa HOM05D001960 ORTHO05D004348 3.6e-163 578.9 485 61.0
arahy.Tifrunner.gnm1.ann1.UFNR33 Arachis hypogaea HOM05D007272 ORTHO05D009305 1.8e-159 566.6 493 59.0
TPR.G4317 Trifolium pratense HOM05D007272 ORTHO05D009305 4.1e-159 565.5 484 59.5
EL10Ac2g02942 Beta vulgaris HOM05D007272 ORTHO05D009305 1.2e-158 563.9 488 59.2
THA.LOC104822369 Tarenaya hassleriana HOM05D007272 ORTHO05D009305 3.8e-157 558.9 495 56.4
Lalb_Chr21g0318941 Lupinus albus HOM05D007272 ORTHO05D009305 8.6e-157 557.8 482 59.8
ECA238G2465 Erigeron canadensis HOM05D007272 ORTHO05D009305 1.1e-156 557.4 500 57.4
Psat1g075440 Pisum sativum HOM05D007272 ORTHO05D009305 5.6e-156 555.1 482 58.7
Nitab4.5_0009739g0030 Nicotiana tabacum HOM05D007272 ORTHO05D009305 1.4e-154 550.4 503 56.7
Lj2g0023599 Lotus japonicus HOM05D007272 ORTHO05D009305 8.9e-154 547.7 492 58.1
ClCG10G014870 Citrullus lanatus HOM05D007272 ORTHO05D009305 1.2e-153 547.4 486 57.6
Cc07_g03090 Coffea canephora HOM05D007272 ORTHO05D009305 1.2e-153 547.4 483 57.3
Migut.H00895 Erythranthe guttata HOM05D007272 ORTHO05D009305 4.4e-153 545.4 499 56.7
MSTRG.3220 Avicennia marina HOM05D007272 ORTHO05D009305 1.2e-150 537.3 500 57.0
Dinv33728 Davidia involucrata HOM05D007272 ORTHO05D009305 2.0e-150 536.6 362 73.5
Lj2g0009951 Lotus japonicus HOM05D007272 ORTHO05D009305 8.6e-149 531.2 477 57.7
SalBow1G7111 Salvia bowleyana HOM05D007272 ORTHO05D009305 1.1e-148 530.8 504 55.2
arahy.Tifrunner.gnm1.ann1.091QIK Arachis hypogaea HOM05D007272 ORTHO05D009305 4.7e-147 525.4 577 50.3
Oeu037173.1 Olea europaea HOM05D007272 ORTHO05D009305 1.2e-145 520.8 493 55.8
CANSAT64G0717 Cannabis sativa HOM05D007272 ORTHO05D009305 3.7e-144 515.8 471 54.6
PSO591G0492 Papaver somniferum HOM05D007272 ORTHO05D009305 1.4e-143 513.8 474 54.2
Peaxi162Scf00129g00431 Petunia axillaris HOM05D007272 ORTHO05D009305 8.6e-141 504.6 504 53.6
FAN09G2990 Fragaria x ananassa HOM05D007272 ORTHO05D009305 3.3e-140 502.7 395 64.3
COL.COLO4_25162 Corchorus olitorius HOM05D007118 ORTHO05D008957 7.3e-140 501.5 481 55.7
Atru.chr8.1898 Acer truncatum HOM05D007272 ORTHO05D009305 1.2e-139 500.7 368 69.8
SGA_v2.0_scaffold135G34775 Striga asiatica HOM05D007118 ORTHO05D008957 6.2e-139 498.4 501 52.9
Solyc02g087730.3 Solanum lycopersicum HOM05D007272 ORTHO05D009305 2.3e-138 496.5 485 53.0
Sopen02g032460 Solanum pennellii HOM05D007272 ORTHO05D009305 8.9e-138 494.6 485 52.4
Gorai.012G056400 Gossypium raimondii HOM05D007272 ORTHO05D009305 2.7e-134 483.0 462 54.8
Gohir.D04G050866 Gossypium hirsutum HOM05D007272 ORTHO05D009305 7.8e-134 481.5 462 54.5
Glyma.19G020400 Glycine max HOM05D007272 ORTHO05D009305 8.1e-131 471.5 342 69.9
Gohir.A05G363800 Gossypium hirsutum HOM05D007272 ORTHO05D009305 8.1e-131 471.5 468 54.1
HPP92_000629 Vanilla planifolia HOM05D007272 ORTHO05D009305 1.5e-129 467.2 488 49.6
VMungo0464G0783 Vigna mungo HOM05D007272 ORTHO05D009305 2.6e-129 466.5 403 63.3
PSO832G2300 Papaver somniferum HOM05D007272 ORTHO05D009305 9.6e-124 448.0 427 53.2
ATR0706G038 Amborella trichopoda HOM05D007272 ORTHO05D009305 1.1e-122 444.5 489 49.3
Aqoxy3G03290 Aquilegia oxysepala HOM05D007272 ORTHO05D009305 2.4e-119 433.3 400 54.5
MD09G1047900 Malus domestica HOM05D007272 ORTHO05D009305 4.0e-114 416.0 515 47.8
Os01g0185400 Oryza sativa ssp. japonica HOM05D007272 ORTHO05D009305 1.5e-113 414.1 493 45.8
Zm00001eb121640 Zea mays HOM05D007272 ORTHO05D009305 1.1e-111 407.9 492 45.7
Medtr6g011500 Medicago truncatula HOM05D007272 ORTHO05D009305 1.0e-109 401.4 375 57.6
Nitab4.5_0000564g0300 Nicotiana tabacum HOM05D007272 ORTHO05D009305 1.3e-107 394.4 565 42.7
MD17G1048100 Malus domestica HOM05D007272 ORTHO05D009305 5.3e-106 389.0 315 62.2
Pp3c15_23310 Physcomitrium patens HOM05D007272 ORTHO05D009305 1.0e-93 348.2 500 41.0
PGSC0003DMG400001312 Solanum tuberosum HOM05D007272 ORTHO05D009305 2.1e-86 323.9 287 57.8
Mapoly0135s0023 Marchantia polymorpha HOM05D007272 ORTHO05D009305 3.0e-85 320.1 484 41.1
CSS0013465 Camellia sinensis var. sinensis HOM05D007272 ORTHO05D009305 4.7e-78 296.2 217 66.8
SMO356G0594 Selaginella moellendorffii HOM05D007272 ORTHO05D009305 2.2e-75 287.3 438 40.9
CSS0034889 Camellia sinensis var. sinensis HOM05D007272 ORTHO05D009305 1.6e-62 244.6 241 55.6
CDE04G0606 Ceratophyllum demersum HOM05D007272 ORTHO05D009305 2.5e-47 194.1 199 50.3
Duzib147G0842 Durio zibethinus HOM05D007272 ORTHO05D009305 2.9e-40 170.6 168 56.0
Hma1.2p1_0449F.1_g155150 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 6.2e-30 136.3 170 45.3
Hma1.2p1_2982F.1_g331245 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 6.2e-30 136.3 170 45.3
AagrBONN_evm.TU.Sc2ySwM_344.2727 Anthoceros agrestis HOM05D007272 ORTHO05D009305 3.7e-27 127.1 179 37.4
Zm00001eb204740 Zea mays HOM05D007272 ORTHO05D009305 1.1e-26 125.6 217 39.6
Hma1.2p1_2982F.1_g331250 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 2.8e-22 110.9 72 76.4
ATR0693G009 Amborella trichopoda HOM05D007272 ORTHO05D009305 1.4e-21 108.6 106 53.8
CDE04G1434 Ceratophyllum demersum HOM05D007272 ORTHO05D009305 3.1e-21 107.5 116 50.0
VMungo0464G0246 Vigna mungo HOM05D007272 ORTHO05D009305 7.6e-20 102.8 129 44.2
SGA_v2.0_scaffold52G19082 Striga asiatica HOM05D007272 ORTHO05D009305 6.4e-19 99.8 157 40.1
SGA_v2.0_scaffold52G19148 Striga asiatica HOM05D007272 ORTHO05D009305 1.9e-18 98.2 126 46.8
HanXRQChr07g0191831 Helianthus annuus HOM05D007272 ORTHO05D009305 9.2e-18 95.9 73 63.0
MELO3C030970.2 Cucumis melo HOM05D007272 ORTHO05D009305 2.3e-16 91.3 74 62.2
Medtr8g044020 Medicago truncatula HOM05D007272 ORTHO05D009305 3.9e-16 90.5 179 35.8
Dinv33460 Davidia involucrata HOM05D007272 ORTHO05D010159 1.2e-14 85.5 51 68.6
Medtr6g011510 Medicago truncatula HOM05D007272 ORTHO05D009305 2.8e-14 84.3 122 34.4
SGA_v2.0_scaffold52G19157 Striga asiatica HOM05D016586 ORTHO05D009305 2.0e-12 78.2 64 57.8
FAN19G2836 Fragaria x ananassa HOM05D007272 ORTHO05D045475 2.1e-09 68.2 39 76.9
FvH4_3g41780 Fragaria vesca HOM05D005961 ORTHO05D007391 1.1e-07 62.4 231 23.4
Zm00001eb326820 Zea mays HOM05D005508 ORTHO05D006882 2.5e-07 61.2 302 27.5
MSTRG.3354 Avicennia marina HOM05D005508 ORTHO05D006882 9.6e-07 59.3 290 24.1


User provided reference genes

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