Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_14452 Corylus avellana HOM05D005710 ORTHO05D004657 6.5e-185 650.6 332 100.0
Haze_14462 Corylus avellana HOM05D005710 ORTHO05D004657 2.1e-146 522.7 284 96.1
Cfa007637 Carpinus fangiana HOM05D005710 ORTHO05D004657 3.5e-130 468.8 342 75.7
QL02p039943 Quercus lobata HOM05D005710 ORTHO05D004657 4.2e-83 312.4 350 54.6
CiPaw.04G057600 Carya illinoinensis HOM05D005710 ORTHO05D004657 2.7e-74 283.1 343 51.3
FvH4_6g47270 Fragaria vesca HOM05D005710 ORTHO05D004657 3.0e-65 253.1 351 48.7
Prupe.3G257800 Prunus persica HOM05D005710 ORTHO05D004657 4.0e-65 252.7 360 47.8
MD09G1062500 Malus domestica HOM05D005710 ORTHO05D004657 1.5e-64 250.8 386 45.9
FAN14G2617 Fragaria x ananassa HOM05D005710 ORTHO05D004657 5.7e-64 248.8 350 48.3
RcHm_v2.0_Chr2g0166341 Rosa chinensis HOM05D005710 ORTHO05D004657 1.3e-63 247.7 337 49.0
Sabra17G0080200 Salix brachista HOM05D005710 ORTHO05D004657 4.1e-62 242.7 370 44.1
MD00G1156300 Malus domestica HOM05D005710 ORTHO05D004657 8.0e-58 228.4 348 46.6
Potri.017G091100 Populus trichocarpa HOM05D005710 ORTHO05D004657 1.0e-57 228.0 351 45.0
CANSAT64G1937 Cannabis sativa HOM05D005710 ORTHO05D004657 3.0e-57 226.5 364 44.2
Manes.02G052100 Manihot esculenta HOM05D005710 ORTHO05D004657 4.0e-57 226.1 337 46.0
Cpa.g.sc14.156 Carica papaya HOM05D005710 ORTHO05D004657 7.5e-56 221.9 385 43.4
Ciclev10011685m.g Citrus clementina HOM05D005710 ORTHO05D004657 7.5e-56 221.9 358 43.9
CSS0045690 Camellia sinensis var. sinensis HOM05D005710 ORTHO05D004657 6.4e-55 218.8 406 41.4
Thecc.04G091900 Theobroma cacao HOM05D005710 ORTHO05D004657 2.4e-54 216.9 361 44.6
Hma1.2p1_0481F.1_g161930 Hydrangea macrophylla HOM05D005710 ORTHO05D004657 6.0e-53 212.2 356 42.7
Duzib147G0411 Durio zibethinus HOM05D005710 ORTHO05D004657 3.0e-52 209.9 373 43.4
TWI32G0095 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 6.6e-52 208.8 369 40.4
COL.COLO4_03731 Corchorus olitorius HOM05D005710 ORTHO05D004657 7.3e-51 205.3 354 43.8
Duzib187G0917 Durio zibethinus HOM05D005710 ORTHO05D004657 1.6e-50 204.1 390 40.8
Manes.01G098200 Manihot esculenta HOM05D005710 ORTHO05D004657 2.3e-49 200.3 356 41.3
Atru.chr8.406 Acer truncatum HOM05D005710 ORTHO05D004657 3.4e-48 196.4 357 42.9
FAN09G1437 Fragaria x ananassa HOM05D005710 ORTHO05D004657 4.4e-48 196.1 474 35.4
Gohir.D09G010000 Gossypium hirsutum HOM05D005710 ORTHO05D004657 4.9e-47 192.6 341 41.9
Rhsim08G0074100 Rhododendron simsii HOM05D005710 ORTHO05D004657 8.3e-47 191.8 389 39.8
Gohir.A09G010900 Gossypium hirsutum HOM05D005710 ORTHO05D004657 7.0e-46 188.7 340 41.5
TWI60G1009 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 4.6e-45 186.0 367 36.8
vmacro18155 Vaccinium macrocarpon HOM05D005710 ORTHO05D004657 1.6e-42 177.6 335 40.0
TWI34G1348 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 3.6e-42 176.4 315 39.7
Hma1.2p1_1813F.1_g303710 Hydrangea macrophylla HOM05D005710 ORTHO05D004657 4.7e-42 176.0 282 43.3
FAN05G5426 Fragaria x ananassa HOM05D005710 ORTHO05D004657 6.8e-41 172.2 536 31.3
CsaV3_5G038440 Cucumis sativus L. HOM05D005710 ORTHO05D004657 9.9e-40 168.3 334 41.0
Lalb_Chr17g0337061 Lupinus albus HOM05D005710 ORTHO05D004657 2.2e-39 167.2 380 37.1
TAR629G0087 Trochodendron aralioides HOM05D005710 ORTHO05D004657 6.4e-39 165.6 313 39.9
Dinv34961 Davidia involucrata HOM05D005710 ORTHO05D004657 8.3e-39 165.2 294 43.5
Actinidia01981 Actinidia chinensis HOM05D005710 ORTHO05D004657 4.1e-38 162.9 336 39.0
Lj1g0027832 Lotus japonicus HOM05D005710 ORTHO05D004657 1.6e-37 161.0 341 38.4
arahy.Tifrunner.gnm1.ann1.EE1ZRN Arachis hypogaea HOM05D005710 ORTHO05D004657 3.5e-37 159.8 390 36.9
Sed0007565 Sechium edule HOM05D005710 ORTHO05D004657 3.0e-36 156.8 328 40.9
Oeu025712.1 Olea europaea HOM05D005710 ORTHO05D004657 5.1e-36 156.0 312 39.4
MELO3C022025.2 Cucumis melo HOM05D005710 ORTHO05D004657 1.1e-35 154.8 332 40.1
arahy.Tifrunner.gnm1.ann1.B1JWTK Arachis hypogaea HOM05D005710 ORTHO05D004657 1.5e-35 154.5 356 37.6
Actinidia07818 Actinidia chinensis HOM05D005710 ORTHO05D004657 1.9e-35 154.1 276 44.2
Glyma.08G242700 Glycine max HOM05D005710 ORTHO05D004657 2.1e-34 150.6 389 35.2
Glyma.18G264900 Glycine max HOM05D005710 ORTHO05D004657 3.6e-34 149.8 339 37.5
Gorai.006G011600 Gossypium raimondii HOM05D005710 ORTHO05D004657 8.1e-34 148.7 438 33.1
PGR004G2722 Punica granatum HOM05D005710 ORTHO05D004657 1.8e-33 147.5 328 39.0
DCAR_011051 Daucus carota HOM05D005710 ORTHO05D004657 3.4e-32 143.3 431 32.9
Cc07_g04040 Coffea canephora HOM05D005710 ORTHO05D004657 1.1e-30 138.3 322 39.1
CAN.G206.210 Capsicum annuum HOM05D005710 ORTHO05D004657 3.2e-30 136.7 324 35.8
ClCG11G004670 Citrullus lanatus HOM05D005710 ORTHO05D004657 2.1e-29 134.0 299 40.5
Medtr7g012940 Medicago truncatula HOM05D005710 ORTHO05D004657 2.1e-29 134.0 334 36.2
Lsat_1_v5_gn_3_98801 Lactuca sativa HOM05D005710 ORTHO05D004657 3.5e-29 133.3 390 33.3
VMungo1383G0251 Vigna mungo HOM05D005710 ORTHO05D004657 6.0e-29 132.5 321 34.9
Nitab4.5_0008213g0040 Nicotiana tabacum HOM05D005710 ORTHO05D004657 2.5e-27 127.1 311 35.4
Eucgr.I01977 Eucalyptus grandis HOM05D005710 ORTHO05D004657 7.3e-27 125.6 417 33.1
Phvul.008G035100 Phaseolus vulgaris HOM05D005710 ORTHO05D004657 2.1e-26 124.0 340 33.2
Aqoxy3G03578 Aquilegia oxysepala HOM05D005710 ORTHO05D004657 9.0e-25 118.6 280 35.7
FAN02G2871 Fragaria x ananassa HOM05D005710 ORTHO05D004657 1.5e-24 117.9 142 52.8
Nitab4.5_0000565g0150 Nicotiana tabacum HOM05D005710 ORTHO05D004657 1.5e-24 117.9 302 35.4
Psat3g200880 Pisum sativum HOM05D005710 ORTHO05D004657 1.5e-24 117.9 339 35.1
TPR.G33463 Trifolium pratense HOM05D005710 ORTHO05D004657 9.9e-24 115.2 338 32.5
Sc11g0004700 Simmondsia chinensis HOM05D005710 ORTHO05D004657 1.3e-23 114.8 379 30.3
Migut.K01286 Erythranthe guttata HOM05D005710 ORTHO05D004657 2.2e-23 114.0 333 31.8
SGA_v2.0_scaffold4G02406 Striga asiatica HOM05D005710 ORTHO05D004657 2.9e-23 113.6 332 32.8
THA.LOC104805502 Tarenaya hassleriana HOM05D005710 ORTHO05D004657 3.8e-23 113.2 287 35.2
SalBow7G3425 Salvia bowleyana HOM05D005710 ORTHO05D004657 1.1e-22 111.7 310 35.2
THA.LOC104823892 Tarenaya hassleriana HOM05D005710 ORTHO05D004657 1.4e-22 111.3 270 35.2
ECA246G0940 Erigeron canadensis HOM05D005710 ORTHO05D004657 3.2e-22 110.2 303 32.3
HanXRQChr15g0473071 Helianthus annuus HOM05D005710 ORTHO05D004657 1.6e-21 107.8 298 34.6
EL10Ac2g03101 Beta vulgaris HOM05D005710 ORTHO05D004657 5.1e-20 102.8 292 30.8
SGA_v2.0_scaffold52G19180 Striga asiatica HOM05D005710 ORTHO05D004657 8.7e-20 102.1 227 35.2
Hund13162 Selenicereus undatus HOM05D005710 ORTHO05D004657 3.3e-19 100.1 275 33.1
MBI16_g30408_MAGBIO Magnolia biondii HOM05D001913 ORTHO05D001880 5.6e-19 99.4 284 34.5
Hund15554 Selenicereus undatus HOM05D005710 ORTHO05D004657 9.6e-19 98.6 367 29.2
AUR62018163 Chenopodium quinoa HOM05D005710 ORTHO05D004657 1.6e-18 97.8 355 29.3
Peaxi162Scf00166g00643 Petunia axillaris HOM05D005710 ORTHO05D004657 1.6e-18 97.8 318 32.7
PSO478G1813 Papaver somniferum HOM05D005710 ORTHO05D004657 3.6e-18 96.7 339 31.3
Thhalv10003979m.g Eutrema salsugineum HOM05D005710 ORTHO05D004657 8.1e-18 95.5 268 31.3
Ah.10g032010 Amaranthus hybridus HOM05D005710 ORTHO05D004657 1.8e-17 94.4 132 48.5
Aa31LG9G16660 Aethionema arabicum HOM05D005710 ORTHO05D004657 4.0e-17 93.2 265 33.2
Thhalv10027716m.g Eutrema salsugineum HOM05D005710 ORTHO05D004657 1.5e-16 91.3 79 62.0
TAR371G0637 Trochodendron aralioides HOM05D005710 ORTHO05D004657 2.0e-16 90.9 147 41.5
AT3G29310 Arabidopsis thaliana HOM05D005710 ORTHO05D004657 2.6e-16 90.5 220 31.8
Carub.0005s0802 Capsella rubella HOM05D005710 ORTHO05D004657 2.6e-16 90.5 254 31.9
A06p39970 Brassica napus HOM05D005710 ORTHO05D004657 3.4e-16 90.1 325 28.6
BraA06t26912Z Brassica rapa HOM05D005710 ORTHO05D004657 3.4e-16 90.1 325 28.6
CARHR154030 Cardamine hirsuta HOM05D005710 ORTHO05D004657 4.5e-16 89.7 228 33.8
AUR62042434 Chenopodium quinoa HOM05D005710 ORTHO05D004657 4.5e-16 89.7 318 30.5
BcaB02g07987 Brassica carinata HOM05D005710 ORTHO05D004657 5.8e-16 89.4 357 28.9
PSO017G2516 Papaver somniferum HOM05D005710 ORTHO05D004657 7.6e-16 89.0 85 63.5
BcaB07g30084 Brassica carinata HOM05D005710 ORTHO05D004657 1.3e-15 88.2 233 34.3
Nn4g23370 Nelumbo nucifera HOM05D005710 ORTHO05D004657 1.7e-15 87.8 209 38.8
BcaC08g44413 Brassica carinata HOM05D005710 ORTHO05D004657 2.9e-15 87.0 327 29.7
C06p18500 Brassica napus HOM05D005710 ORTHO05D004657 2.9e-15 87.0 327 29.7
AL5G19350 Arabidopsis lyrata HOM05D005710 ORTHO05D004657 1.1e-14 85.1 229 31.0
Ca_06819_v3 Cicer arietinum L. HOM05D005710 ORTHO05D004657 1.9e-14 84.3 202 36.1
A02p36530 Brassica napus HOM05D005710 ORTHO05D004657 2.4e-14 84.0 299 27.4
BraA02t08649Z Brassica rapa HOM05D005710 ORTHO05D004657 2.4e-14 84.0 299 27.4
Solyc02g088660.4 Solanum lycopersicum HOM05D005710 ORTHO05D004657 2.4e-14 84.0 109 47.7
Sp2g17910 Schrenkiella parvula HOM05D005710 ORTHO05D004657 2.1e-13 80.9 135 40.7
BolC6t37063H Brassica oleracea HOM05D005710 ORTHO05D004657 6.0e-13 79.3 71 59.2
BcaC03g17571 Brassica carinata HOM05D005710 ORTHO05D004657 7.9e-13 79.0 304 27.3
C02p55500 Brassica napus HOM05D005710 ORTHO05D004657 1.8e-12 77.8 304 27.3
BolC2t11608H Brassica oleracea HOM05D005710 ORTHO05D004657 1.8e-12 77.8 304 27.3
Aa31LG2G3970 Aethionema arabicum HOM05D005710 ORTHO05D004657 3.0e-12 77.0 86 52.3
CDE07G0246 Ceratophyllum demersum HOM05D001913 ORTHO05D001880 3.0e-12 77.0 83 51.8
Sopen02g033380 Solanum pennellii HOM05D005710 ORTHO05D004657 4.8e-10 69.7 169 33.7
PGSC0003DMG400001447 Solanum tuberosum HOM05D005710 ORTHO05D004657 1.4e-09 68.2 202 30.7
C07p38200 Brassica napus HOM05D005710 ORTHO05D004657 4.0e-09 66.6 86 48.8
Zm00001eb352990 Zea mays HOM05D005710 ORTHO05D004657 6.9e-09 65.9 188 34.0
Os05g0512400 Oryza sativa ssp. japonica HOM05D005710 ORTHO05D004657 9.0e-09 65.5 75 53.3
Lj4P116T76 Lonicera japonica HOM05D005710 ORTHO05D004657 2.6e-08 63.9 118 44.1
HPP92_019480 Vanilla planifolia HOM05D005710 ORTHO05D004657 4.5e-08 63.2 81 42.0


User provided reference genes

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