Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_14429 Corylus avellana HOM05D007565 ORTHO05D009551 1.9e-89 332.4 163 100.0
Cfa007669 Carpinus fangiana HOM05D007565 ORTHO05D009551 7.6e-86 320.5 163 96.9
CiPaw.04G055600 Carya illinoinensis HOM05D007565 ORTHO05D009551 1.3e-56 223.4 164 70.7
Dinv33829 Davidia involucrata HOM05D007565 ORTHO05D009551 3.9e-50 201.8 159 61.6
TAR371G0975 Trochodendron aralioides HOM05D007565 ORTHO05D009551 9.1e-47 190.7 164 59.8
Prupe.3G254800 Prunus persica HOM05D007565 ORTHO05D009551 2.0e-46 189.5 167 61.1
GSVIVG01032907001 Vitis vinifera HOM05D007565 ORTHO05D009551 2.6e-46 189.1 156 60.9
CANSAT64G0913 Cannabis sativa HOM05D007565 ORTHO05D009551 2.7e-43 179.1 155 58.1
PGR004G0757 Punica granatum HOM05D007565 ORTHO05D009551 2.0e-41 172.9 157 56.7
RcHm_v2.0_Chr2g0165831 Rosa chinensis HOM05D007565 ORTHO05D009551 3.4e-41 172.2 164 54.9
Lalb_Chr02g0158911 Lupinus albus HOM05D007565 ORTHO05D009551 3.7e-40 168.7 151 58.3
FvH4_6g46840 Fragaria vesca HOM05D007565 ORTHO05D009551 4.8e-40 168.3 164 53.7
MD09G1066900 Malus domestica HOM05D007565 ORTHO05D009551 8.3e-40 167.5 157 56.1
MBI16_g10827_MAGBIO Magnolia biondii HOM05D007565 ORTHO05D009551 7.0e-39 164.5 154 54.5
Rhsim08G0074900 Rhododendron simsii HOM05D007565 ORTHO05D009551 7.0e-39 164.5 154 54.5
arahy.Tifrunner.gnm1.ann1.GE184H Arachis hypogaea HOM05D007565 ORTHO05D009551 9.1e-39 164.1 152 54.6
Nn4g23433 Nelumbo nucifera HOM05D007565 ORTHO05D009551 1.2e-38 163.7 164 53.7
Manes.01G096100 Manihot esculenta HOM05D007565 ORTHO05D009551 2.0e-38 162.9 163 55.2
arahy.Tifrunner.gnm1.ann1.X5N52Z Arachis hypogaea HOM05D007565 ORTHO05D009551 1.0e-37 160.6 152 53.3
Psat1g068880 Pisum sativum HOM05D007565 ORTHO05D009551 1.3e-37 160.2 131 61.1
Gohir.D09G008500 Gossypium hirsutum HOM05D007565 ORTHO05D009551 2.2e-37 159.5 150 58.7
Gorai.006G010200 Gossypium raimondii HOM05D007565 ORTHO05D009551 2.2e-37 159.5 150 58.7
Glyma.19G030200 Glycine max HOM05D007565 ORTHO05D009551 2.9e-37 159.1 152 55.3
Potri.004G120300 Populus trichocarpa HOM05D007565 ORTHO05D009551 3.8e-37 158.7 164 51.8
Sabra04G0069500 Salix brachista HOM05D007565 ORTHO05D009551 3.8e-37 158.7 164 50.6
FAN05G3080 Fragaria x ananassa HOM05D007565 ORTHO05D009551 1.1e-36 157.1 152 54.6
CSS0012139 Camellia sinensis var. sinensis HOM05D007565 ORTHO05D009551 1.9e-36 156.4 164 50.0
Cc07_g04240 Coffea canephora HOM05D007565 ORTHO05D009551 2.5e-36 156.0 159 54.1
Eucgr.I02035 Eucalyptus grandis HOM05D007565 ORTHO05D009551 3.2e-36 155.6 109 67.9
TWI60G0367 Tripterygium wilfordii HOM05D007565 ORTHO05D009551 3.2e-36 155.6 154 50.6
ATR0177G044 Amborella trichopoda HOM05D007565 ORTHO05D009551 4.2e-36 155.2 156 51.9
Lj2g0002665 Lotus japonicus HOM05D007565 ORTHO05D009551 4.2e-36 155.2 151 54.3
Gohir.A09G009400 Gossypium hirsutum HOM05D007565 ORTHO05D009551 5.5e-36 154.8 111 71.2
Cpa.g.sc14.177 Carica papaya HOM05D007565 ORTHO05D009551 9.4e-36 154.1 134 58.2
PSO478G3761 Papaver somniferum HOM05D007565 ORTHO05D009551 1.6e-35 153.3 159 53.5
vmacro18148 Vaccinium macrocarpon HOM05D007565 ORTHO05D009551 2.1e-35 152.9 163 49.7
DCAR_025432 Daucus carota HOM05D007565 ORTHO05D009551 2.7e-35 152.5 165 49.7
Phvul.004G037200 Phaseolus vulgaris HOM05D007565 ORTHO05D009551 6.1e-35 151.4 152 53.9
TPR.G10009 Trifolium pratense HOM05D007565 ORTHO05D009551 4.0e-34 148.7 112 62.5
VMungo0464G0770 Vigna mungo HOM05D007565 ORTHO05D009551 1.2e-33 147.1 157 49.7
ECA238G4035 Erigeron canadensis HOM05D007565 ORTHO05D009551 1.5e-33 146.7 151 49.7
Atru.chr8.429 Acer truncatum HOM05D007565 ORTHO05D009551 2.6e-33 146.0 154 51.9
HanXRQChr07g0199761 Helianthus annuus HOM05D007565 ORTHO05D009551 2.6e-33 146.0 157 47.8
Lsat_1_v5_gn_2_90121 Lactuca sativa HOM05D007565 ORTHO05D009551 4.4e-33 145.2 155 52.9
QL02p067580 Quercus lobata HOM05D007565 ORTHO05D009551 4.4e-33 145.2 90 76.7
Aqoxy3G00508 Aquilegia oxysepala HOM05D007565 ORTHO05D009551 7.5e-33 144.4 163 49.7
Actinidia17585 Actinidia chinensis HOM05D007565 ORTHO05D009551 1.3e-32 143.7 150 50.7
Migut.H00623 Erythranthe guttata HOM05D007565 ORTHO05D009551 2.8e-32 142.5 121 57.9
AT5G39210 Arabidopsis thaliana HOM05D007565 ORTHO05D009551 3.7e-32 142.1 162 48.1
BcaB06g27735 Brassica carinata HOM05D007565 ORTHO05D009551 8.3e-32 141.0 100 66.0
BcaC02g08856 Brassica carinata HOM05D007565 ORTHO05D009551 1.1e-31 140.6 97 67.0
C04p49800 Brassica napus HOM05D007565 ORTHO05D009551 1.1e-31 140.6 97 67.0
BolC4t26571H Brassica oleracea HOM05D007565 ORTHO05D009551 1.1e-31 140.6 97 67.0
Thhalv10027973m.g Eutrema salsugineum HOM05D007565 ORTHO05D009551 1.4e-31 140.2 159 47.8
THA.LOC104822868 Tarenaya hassleriana HOM05D007565 ORTHO05D009551 1.4e-31 140.2 159 49.7
A04p15530 Brassica napus HOM05D007565 ORTHO05D009551 2.4e-31 139.4 97 66.0
BraA04t17189Z Brassica rapa HOM05D007565 ORTHO05D009551 2.4e-31 139.4 97 66.0
Solyc02g066920.3 Solanum lycopersicum HOM05D007565 ORTHO05D009551 2.4e-31 139.4 95 65.3
PGSC0003DMG400025155 Solanum tuberosum HOM05D007565 ORTHO05D009551 3.1e-31 139.0 94 66.0
Carub.0007s3671 Capsella rubella HOM05D007565 ORTHO05D009551 4.1e-31 138.7 97 66.0
Sp7g02770 Schrenkiella parvula HOM05D007565 ORTHO05D009551 4.1e-31 138.7 97 66.0
CAN.G398.21 Capsicum annuum HOM05D007565 ORTHO05D009551 5.4e-31 138.3 94 68.1
CARHR263200 Cardamine hirsuta HOM05D007565 ORTHO05D009551 5.4e-31 138.3 156 47.4
Nitab4.5_0002957g0030 Nicotiana tabacum HOM05D000753 ORTHO05D003622 5.4e-31 138.3 94 68.1
CDE10G0935 Ceratophyllum demersum HOM05D007565 ORTHO05D009551 7.0e-31 137.9 96 65.6
FAN02G0614 Fragaria x ananassa HOM05D007565 ORTHO05D009551 7.0e-31 137.9 94 67.0
FAN09G3824 Fragaria x ananassa HOM05D007565 ORTHO05D009551 7.0e-31 137.9 94 67.0
Peaxi162Scf00991g00215 Petunia axillaris HOM05D007565 ORTHO05D009551 7.0e-31 137.9 94 68.1
FAN14G1390 Fragaria x ananassa HOM05D007565 ORTHO05D009551 9.1e-31 137.5 94 67.0
ClCG07G016310 Citrullus lanatus HOM05D007565 ORTHO05D009551 1.2e-30 137.1 161 49.1
SalBow1G1387 Salvia bowleyana HOM05D007565 ORTHO05D009551 1.6e-30 136.7 131 51.9
SalBow1G4541 Salvia bowleyana HOM05D007565 ORTHO05D009551 1.6e-30 136.7 131 51.9
MSTRG.2997 Avicennia marina HOM05D007565 ORTHO05D009551 2.0e-30 136.3 148 48.0
Sopen02g016110 Solanum pennellii HOM05D007565 ORTHO05D009551 2.0e-30 136.3 95 64.2
EL10Ac2g02475 Beta vulgaris HOM05D007565 ORTHO05D009551 2.7e-30 136.0 93 69.9
AUR62018189 Chenopodium quinoa HOM05D007565 ORTHO05D009551 3.5e-30 135.6 102 62.7
COL.COLO4_04935 Corchorus olitorius HOM05D007565 ORTHO05D009551 4.5e-30 135.2 75 81.3
Aa31LG9G16710 Aethionema arabicum HOM05D007565 ORTHO05D009551 5.9e-30 134.8 92 68.5
Os01g0763700 Oryza sativa ssp. japonica HOM05D007565 ORTHO05D009551 1.3e-29 133.7 79 73.4
Sed0016543 Sechium edule HOM05D007565 ORTHO05D009551 1.7e-29 133.3 100 62.0
EL10Ac2g03143 Beta vulgaris HOM05D007565 ORTHO05D009551 2.3e-29 132.9 78 76.9
AUR62038674 Chenopodium quinoa HOM05D007565 ORTHO05D009551 2.3e-29 132.9 87 69.0
Nitab4.5_0000212g0260 Nicotiana tabacum HOM05D000753 ORTHO05D003622 3.8e-29 132.1 113 58.4
Ciclev10012981m.g Citrus clementina HOM05D007565 ORTHO05D009551 5.0e-29 131.7 157 49.0
unitig_736.g22275 Utricularia gibba HOM05D007565 ORTHO05D009551 6.6e-29 131.3 102 61.8
AL7G51250 Arabidopsis lyrata HOM05D007565 ORTHO05D009551 1.5e-28 130.2 101 62.4
Lju41C3T7 Lonicera japonica HOM05D007565 ORTHO05D009551 1.9e-28 129.8 92 73.9
CsaV3_4G009160 Cucumis sativus L. HOM05D007565 ORTHO05D009551 4.2e-28 128.6 111 54.1
MELO3C024877.2 Cucumis melo HOM05D007565 ORTHO05D009551 1.8e-26 123.2 108 56.5
Pp3c15_1410 Physcomitrium patens HOM05D007565 ORTHO05D009551 4.9e-24 115.2 101 54.5
Medtr6g015250 Medicago truncatula HOM05D007565 ORTHO05D009551 1.1e-23 114.0 110 51.8
Mapoly0001s0042 Marchantia polymorpha HOM05D007565 ORTHO05D009551 4.1e-23 112.1 79 57.0
SMO133G0016 Selaginella moellendorffii HOM05D007565 ORTHO05D009551 1.2e-22 110.5 77 58.4
Medtr6g015275 Medicago truncatula HOM05D007565 ORTHO05D009551 2.0e-22 109.8 134 45.5
AagrBONN_evm.TU.Sc2ySwM_362.2072 Anthoceros agrestis HOM05D007565 ORTHO05D009551 2.9e-21 105.9 117 47.0
BcaC02g08855 Brassica carinata HOM05D007565 ORTHO05D009551 1.2e-19 100.5 97 53.6
BcaC02g08857 Brassica carinata HOM05D007565 ORTHO05D009551 1.2e-19 100.5 97 53.6
CDE10G1057 Ceratophyllum demersum HOM05D000058 ORTHO05D000077 8.0e-19 97.8 75 60.0
SEGI_38587 Sequoiadendron giganteum HOM05D007565 ORTHO05D009551 4.0e-18 95.5 89 49.4
MBI19_g17444_MAGBIO Magnolia biondii HOM05D000545 ORTHO05D000539 1.6e-11 73.6 70 51.4
TPR.G36332 Trifolium pratense HOM05D007565 ORTHO05D009551 6.8e-10 68.2 49 61.2


User provided reference genes

Program Settings