Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_14327 Corylus avellana HOM05D006811 ORTHO05D008419 3.9e-162 574.7 284 100.0
Cfa007746 Carpinus fangiana HOM05D006811 ORTHO05D008419 1.4e-138 496.5 280 88.9
CiPaw.03G075800 Carya illinoinensis HOM05D006811 ORTHO05D008419 2.0e-118 429.5 289 75.1
Sabra17G0117500 Salix brachista HOM05D006811 ORTHO05D008419 9.4e-108 394.0 293 67.9
Potri.017G139400 Populus trichocarpa HOM05D006811 ORTHO05D008419 1.5e-105 386.7 288 67.7
MD17G1286700 Malus domestica HOM05D006811 ORTHO05D008419 3.4e-105 385.6 299 66.9
QL02p064229 Quercus lobata HOM05D006811 ORTHO05D008419 2.8e-104 382.5 339 62.5
Dinv28246 Davidia involucrata HOM05D006811 ORTHO05D008419 3.1e-103 379.0 293 67.6
GSVIVG01035212001 Vitis vinifera HOM05D006811 ORTHO05D008419 2.0e-102 376.3 264 70.8
Hma1.2p1_0158F.1_g069620 Hydrangea macrophylla HOM05D006811 ORTHO05D008419 4.5e-102 375.2 293 66.6
RcHm_v2.0_Chr3g0488721 Rosa chinensis HOM05D006811 ORTHO05D008419 4.5e-102 375.2 301 65.4
arahy.Tifrunner.gnm1.ann1.A3RENN Arachis hypogaea HOM05D006811 ORTHO05D008419 5.0e-101 371.7 286 65.0
CsaV3_4G000630 Cucumis sativus L. HOM05D006811 ORTHO05D008419 1.1e-100 370.5 285 63.5
Lalb_Chr15g0085211 Lupinus albus HOM05D006811 ORTHO05D008419 1.1e-100 370.5 287 64.8
FAN23G2849 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.9e-100 369.8 298 63.8
ClCG10G010680 Citrullus lanatus HOM05D006811 ORTHO05D008419 2.5e-100 369.4 277 65.3
Peaxi162Scf00713g00019 Petunia axillaris HOM05D006811 ORTHO05D008419 7.2e-100 367.9 288 66.0
Lj6g0026577 Lotus japonicus HOM05D006811 ORTHO05D008419 9.5e-100 367.5 292 63.0
CSS0033706 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 2.8e-99 365.9 291 65.3
FvH4_1g27290 Fragaria vesca HOM05D006811 ORTHO05D008419 2.8e-99 365.9 276 67.4
Aqoxy3G04154 Aquilegia oxysepala HOM05D006811 ORTHO05D008419 3.6e-99 365.5 294 65.6
TAR622G1242 Trochodendron aralioides HOM05D006811 ORTHO05D008419 1.0e-98 364.0 292 66.4
Eucgr.F02911 Eucalyptus grandis HOM05D006811 ORTHO05D008419 1.8e-98 363.2 290 66.9
PGSC0003DMG400016719 Solanum tuberosum HOM05D006811 ORTHO05D008419 3.0e-98 362.5 292 62.0
Medtr3g064600 Medicago truncatula HOM05D006811 ORTHO05D008419 1.5e-97 360.1 287 65.2
Actinidia40414 Actinidia chinensis HOM05D006811 ORTHO05D008419 4.4e-97 358.6 287 64.5
Psat5g142440 Pisum sativum HOM05D006811 ORTHO05D008419 2.9e-96 355.9 284 63.7
Sopen02g025910 Solanum pennellii HOM05D006811 ORTHO05D008419 1.1e-95 354.0 277 63.2
Rhsim10G0185300 Rhododendron simsii HOM05D006811 ORTHO05D008419 5.4e-95 351.7 288 66.3
TPR.G26689 Trifolium pratense HOM05D006811 ORTHO05D008419 5.4e-95 351.7 287 63.1
MSTRG.15636 Avicennia marina HOM05D006811 ORTHO05D008419 1.2e-94 350.5 292 61.6
Thecc.04G060000 Theobroma cacao HOM05D006811 ORTHO05D008419 1.2e-94 350.5 287 63.8
Cc07_g12750 Coffea canephora HOM05D006811 ORTHO05D008419 2.7e-94 349.4 291 61.5
Glyma.18G043800 Glycine max HOM05D006811 ORTHO05D008419 5.9e-94 348.2 291 60.1
Glyma.11G212500 Glycine max HOM05D006811 ORTHO05D008419 1.7e-93 346.7 293 59.4
Nn4g24731 Nelumbo nucifera HOM05D006811 ORTHO05D008419 3.0e-93 345.9 295 62.7
Ciclev10013413m.g Citrus clementina HOM05D006811 ORTHO05D008419 8.6e-93 344.4 267 66.3
Hund22201 Selenicereus undatus HOM05D006811 ORTHO05D008419 1.5e-92 343.6 292 61.6
Gohir.A12G052300 Gossypium hirsutum HOM05D006811 ORTHO05D008419 2.5e-92 342.8 295 61.0
Gorai.008G054100 Gossypium raimondii HOM05D006811 ORTHO05D008419 2.5e-92 342.8 295 60.7
Ca_17071_v3 Cicer arietinum L. HOM05D006811 ORTHO05D008419 4.3e-92 342.0 251 66.5
CANSAT54G1721 Cannabis sativa HOM05D006811 ORTHO05D008419 2.1e-91 339.7 289 62.3
Nitab4.5_0000483g0290 Nicotiana tabacum HOM05D006811 ORTHO05D008419 2.8e-91 339.3 264 64.4
Aa31LG2G2700 Aethionema arabicum HOM05D006811 ORTHO05D008419 3.6e-91 339.0 265 63.0
Migut.K00747 Erythranthe guttata HOM05D006811 ORTHO05D008419 6.2e-91 338.2 260 62.7
Carub.0002s1184 Capsella rubella HOM05D006811 ORTHO05D008419 1.0e-90 337.4 298 60.7
FAN26G0959 Fragaria x ananassa HOM05D006811 ORTHO05D008419 3.1e-90 335.9 273 63.7
EL10Ac4g08932 Beta vulgaris HOM05D006811 ORTHO05D008419 5.2e-90 335.1 290 60.3
CARHR057790 Cardamine hirsuta HOM05D006811 ORTHO05D008419 8.9e-90 334.3 268 64.9
Cpa.g.sc178.33 Carica papaya HOM05D006811 ORTHO05D008419 8.9e-90 334.3 246 69.1
SalBow5G0387 Salvia bowleyana HOM05D006811 ORTHO05D008419 8.9e-90 334.3 262 64.1
SalBow5G5201 Salvia bowleyana HOM05D006811 ORTHO05D008419 8.9e-90 334.3 262 64.1
VMungo0540G2025 Vigna mungo HOM05D006811 ORTHO05D008419 8.9e-90 334.3 288 60.1
AL2G23270 Arabidopsis lyrata HOM05D006811 ORTHO05D008419 2.0e-89 333.2 298 60.1
AT1G65900 Arabidopsis thaliana HOM05D006811 ORTHO05D008419 7.5e-89 331.3 291 61.2
Thhalv10018647m.g Eutrema salsugineum HOM05D006811 ORTHO05D008419 7.5e-89 331.3 295 61.0
Sp5g20950 Schrenkiella parvula HOM05D006811 ORTHO05D008419 1.7e-88 330.1 298 60.4
Nitab4.5_0008137g0060 Nicotiana tabacum HOM05D006811 ORTHO05D008419 2.2e-88 329.7 311 57.2
THA.LOC104825578 Tarenaya hassleriana HOM05D006811 ORTHO05D008419 4.9e-88 328.6 293 58.4
Lsat_1_v5_gn_2_71780 Lactuca sativa HOM05D006811 ORTHO05D008419 1.1e-87 327.4 261 61.3
HanXRQChr14g0443391 Helianthus annuus HOM05D006811 ORTHO05D008419 2.4e-87 326.2 251 63.3
Sc06g0003070 Simmondsia chinensis HOM05D006811 ORTHO05D008419 2.7e-86 322.8 266 59.8
DCAR_020444 Daucus carota HOM05D006811 ORTHO05D008419 6.0e-86 321.6 260 63.1
HanXRQChr12g0365711 Helianthus annuus HOM05D006811 ORTHO05D008419 6.0e-86 321.6 270 60.0
BcaB03g15309 Brassica carinata HOM05D006811 ORTHO05D008419 1.0e-85 320.9 264 63.3
A07p33010 Brassica napus HOM05D006811 ORTHO05D008419 1.0e-85 320.9 264 63.3
BraA07t30929Z Brassica rapa HOM05D006811 ORTHO05D008419 1.0e-85 320.9 264 63.3
Duzib138G1484 Durio zibethinus HOM05D006811 ORTHO05D008419 1.7e-85 320.1 282 61.0
C06p39240 Brassica napus HOM05D006811 ORTHO05D008419 3.0e-85 319.3 264 63.3
PSO063G4300 Papaver somniferum HOM05D006811 ORTHO05D008419 3.0e-85 319.3 300 56.7
vmacro20465 Vaccinium macrocarpon HOM05D006811 ORTHO05D008419 3.9e-85 318.9 283 61.8
BcaC08g46096 Brassica carinata HOM05D006811 ORTHO05D008419 1.5e-84 317.0 264 63.3
MELO3C017973.2 Cucumis melo HOM05D006811 ORTHO05D008419 1.1e-82 310.8 239 64.9
Lj4A251G58 Lonicera japonica HOM05D006811 ORTHO05D008419 2.0e-81 306.6 311 54.7
BolC6t39018H Brassica oleracea HOM05D006811 ORTHO05D008419 7.5e-81 304.7 301 55.5
PGR004G2199 Punica granatum HOM05D006811 ORTHO05D008419 4.6e-78 295.4 297 56.9
Zm00001eb001500 Zea mays HOM05D006811 ORTHO05D008419 3.6e-75 285.8 261 55.2
FAN28G2567 Fragaria x ananassa HOM05D006811 ORTHO05D008419 2.3e-74 283.1 177 75.7
Gohir.D12G050800 Gossypium hirsutum HOM05D006811 ORTHO05D008419 2.3e-74 283.1 260 58.5
CDE05G3344 Ceratophyllum demersum HOM05D006811 ORTHO05D008419 8.9e-74 281.2 265 56.6
TWI53G0648 Tripterygium wilfordii HOM05D006811 ORTHO05D008419 4.4e-73 278.9 214 64.0
Prupe.3G014300 Prunus persica HOM05D006811 ORTHO05D008419 5.8e-73 278.5 177 74.6
unitig_0.g2638 Utricularia gibba HOM05D006811 ORTHO05D008419 2.9e-72 276.2 291 50.5
Atru.chr1.2130 Acer truncatum HOM05D006811 ORTHO05D008419 4.1e-71 272.3 169 76.3
ATR0807G007 Amborella trichopoda HOM05D006811 ORTHO05D008419 4.1e-71 272.3 252 54.4
Manes.02G081300 Manihot esculenta HOM05D006811 ORTHO05D008419 7.1e-71 271.6 176 71.6
AUR62004775 Chenopodium quinoa HOM05D006811 ORTHO05D008419 1.0e-69 267.7 281 52.3
Sed0027023 Sechium edule HOM05D006811 ORTHO05D008419 1.6e-67 260.4 178 67.4
AUR62003402 Chenopodium quinoa HOM05D006811 ORTHO05D008419 2.8e-67 259.6 278 50.4
ECA238G0794 Erigeron canadensis HOM05D006811 ORTHO05D008419 8.9e-66 254.6 262 52.7
SGA_v2.0_scaffold115G32048 Striga asiatica HOM05D006811 ORTHO05D008419 4.4e-65 252.3 166 70.5
Phvul.006G087200 Phaseolus vulgaris HOM05D006811 ORTHO05D008419 3.3e-60 236.1 175 63.4
arahy.Tifrunner.gnm1.ann1.JYBV0C Arachis hypogaea HOM05D006811 ORTHO05D008419 1.9e-52 210.3 188 60.6
HPP92_014601 Vanilla planifolia HOM05D006811 ORTHO05D008419 1.6e-51 207.2 176 54.0
FAN19G2462 Fragaria x ananassa HOM05D006811 ORTHO05D008419 2.0e-49 200.3 149 66.4
DCAR_017976 Daucus carota HOM05D006811 ORTHO05D008419 7.1e-47 191.8 163 58.9
CSS0043986 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 4.8e-43 179.1 147 63.3
Ah.06g191630 Amaranthus hybridus HOM05D006811 ORTHO05D008419 1.0e-40 171.4 168 55.4
HPP92_014605 Vanilla planifolia HOM05D006811 ORTHO05D008419 1.5e-36 157.5 136 54.4
AagrBONN_evm.TU.Sc2ySwM_368.3231 Anthoceros agrestis HOM05D006811 ORTHO05D008419 4.6e-30 136.0 251 33.1
Medtr3g073800 Medicago truncatula HOM05D006811 ORTHO05D008419 7.4e-28 128.6 92 70.7
FAN28G1678 Fragaria x ananassa HOM05D006811 ORTHO05D008419 3.6e-22 109.8 89 65.2
FAN28G2576 Fragaria x ananassa HOM05D006811 ORTHO05D008419 8.8e-21 105.1 67 70.1
Aa31LG2G2690 Aethionema arabicum HOM05D000356 ORTHO05D000265 4.3e-20 102.8 181 38.1
CBR_g31433 Chara braunii HOM05D006811 ORTHO05D008419 5.3e-18 95.9 268 30.2
PSO782G1785 Papaver somniferum HOM05D006811 ORTHO05D008419 2.0e-17 94.0 78 56.4
Os03g0120000 Oryza sativa ssp. japonica HOM05D006811 ORTHO05D008419 3.8e-16 89.7 64 65.6
COL.COLO4_03698 Corchorus olitorius HOM05D006811 ORTHO05D008419 9.4e-15 85.1 68 61.8
arahy.Tifrunner.gnm1.ann1.XFK461 Arachis hypogaea HOM05D006811 ORTHO05D008419 2.3e-13 80.5 75 57.3
Oeu032292.1 Olea europaea HOM05D006811 ORTHO05D008419 2.6e-12 77.0 77 57.1
SEGI_23786 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 3.3e-12 76.6 110 39.1
A02p12460 Brassica napus HOM05D006811 ORTHO05D008419 5.7e-12 75.9 47 70.2
MCO05G199 Micromonas commoda HOM05D006811 ORTHO05D008419 9.1e-10 68.6 267 28.1
PRCOL_00005605 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 2.9e-08 63.5 118 35.6
Cre02.g081050 Chlamydomonas reinhardtii HOM05D006811 ORTHO05D008419 1.6e-06 57.8 273 24.2
PRCOL_00004838 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 2.1e-06 57.4 105 33.3
CSS0020523 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 6.1e-06 55.8 36 66.7


User provided reference genes

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