Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_14313 Corylus avellana HOM05D006436 ORTHO05D008011 2.4e-153 545.4 270 100.0
Cfa007759 Carpinus fangiana HOM05D006436 ORTHO05D008011 4.8e-53 212.2 105 98.1
Manes.02G134600 Manihot esculenta HOM05D006436 ORTHO05D008011 2.4e-52 209.9 117 84.6
Nn4g25693 Nelumbo nucifera HOM05D006436 ORTHO05D008011 7.2e-49 198.4 118 80.5
PGSC0003DMG400023565 Solanum tuberosum HOM05D006436 ORTHO05D008011 4.0e-47 192.6 113 80.5
FAN18G0548 Fragaria x ananassa HOM05D006436 ORTHO05D008011 5.7e-46 188.7 146 65.8
FAN08G3413 Fragaria x ananassa HOM05D006436 ORTHO05D008011 5.9e-43 178.7 123 72.4
C03p31970 Brassica napus HOM05D006436 ORTHO05D008011 8.6e-42 174.9 114 72.8
BolC3t15539H Brassica oleracea HOM05D006436 ORTHO05D008011 1.1e-41 174.5 114 72.8
BraA03t11880Z Brassica rapa HOM05D006436 ORTHO05D008011 1.5e-41 174.1 114 72.8
Thhalv10028339m.g Eutrema salsugineum HOM05D006436 ORTHO05D008011 5.6e-41 172.2 115 73.0
FvH4_5g26310 Fragaria vesca HOM05D006436 ORTHO05D008011 1.4e-39 167.5 124 67.7
Cc00_g04020 Coffea canephora HOM05D006436 ORTHO05D008011 3.0e-39 166.4 105 74.3
CSS0035006 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 8.9e-39 164.9 150 58.7
arahy.Tifrunner.gnm1.ann1.8KE236 Arachis hypogaea HOM05D006436 ORTHO05D008011 1.7e-37 160.6 179 53.1
Sc15g0000210 Simmondsia chinensis HOM05D006436 ORTHO05D008011 1.4e-36 157.5 120 63.3
Thecc.05G304200 Theobroma cacao HOM05D006436 ORTHO05D008011 1.4e-36 157.5 98 77.6
QL08p017466 Quercus lobata HOM05D006436 ORTHO05D008011 1.6e-35 154.1 124 64.5
CBR_g12236 Chara braunii HOM05D006436 ORTHO05D008011 1.5e-33 147.5 113 62.8
SMO347G0032 Selaginella moellendorffii HOM05D006436 ORTHO05D008011 3.6e-32 142.9 119 57.1
CDE11G1230 Ceratophyllum demersum HOM05D006436 ORTHO05D008011 2.3e-31 140.2 119 60.5
SEGI_01802 Sequoiadendron giganteum HOM05D006436 ORTHO05D008011 2.3e-31 140.2 96 66.7
Hund24464 Selenicereus undatus HOM05D006436 ORTHO05D008011 3.1e-31 139.8 124 54.8
CSS0025543 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 6.8e-31 138.7 153 52.9
Mapoly0028s0068 Marchantia polymorpha HOM05D006436 ORTHO05D008011 9.8e-30 134.8 119 55.5
TWI77G0906 Tripterygium wilfordii HOM05D006436 ORTHO05D008011 9.8e-30 134.8 122 62.3
arahy.Tifrunner.gnm1.ann1.7TMM1B Arachis hypogaea HOM05D006436 ORTHO05D008011 2.9e-29 133.3 119 58.0
Atru.chr1.2057 Acer truncatum HOM05D006436 ORTHO05D008011 2.4e-28 130.2 119 59.7
arahy.Tifrunner.gnm1.ann1.RB24L7 Arachis hypogaea HOM05D006436 ORTHO05D008011 2.4e-28 130.2 119 56.3
Eucgr.J01642 Eucalyptus grandis HOM05D006436 ORTHO05D008011 2.4e-28 130.2 119 57.1
ECA234G4304 Erigeron canadensis HOM05D006436 ORTHO05D008011 3.2e-28 129.8 119 57.1
Ca_05765_v3 Cicer arietinum L. HOM05D006436 ORTHO05D008011 4.1e-28 129.4 119 55.5
MBI18_g05914_MAGBIO Magnolia biondii HOM05D006436 ORTHO05D008011 4.1e-28 129.4 119 57.1
MD09G1253300 Malus domestica HOM05D006436 ORTHO05D008011 7.0e-28 128.6 121 57.0
Ca_18506_v3 Cicer arietinum L. HOM05D006436 ORTHO05D008011 9.2e-28 128.3 119 54.6
Psat2g043120 Pisum sativum HOM05D006436 ORTHO05D008011 1.2e-27 127.9 119 56.3
RcHm_v2.0_Chr7g0218931 Rosa chinensis HOM05D006436 ORTHO05D008011 1.2e-27 127.9 123 55.3
arahy.Tifrunner.gnm1.ann1.QIUU4Q Arachis hypogaea HOM05D006436 ORTHO05D008011 3.5e-27 126.3 119 56.3
CiPaw.03G076800 Carya illinoinensis HOM05D006436 ORTHO05D008011 1.0e-26 124.8 124 56.5
Ciclev10022503m.g Citrus clementina HOM05D006436 ORTHO05D008011 1.3e-26 124.4 119 56.3
Prupe.3G143200 Prunus persica HOM05D006436 ORTHO05D008011 1.3e-26 124.4 119 56.3
Duzib168G0581 Durio zibethinus HOM05D006436 ORTHO05D008011 1.7e-26 124.0 69 84.1
LjContig00141g0009494 Lotus japonicus HOM05D006436 ORTHO05D008011 2.3e-26 123.6 119 54.6
Phvul.008G233200 Phaseolus vulgaris HOM05D006436 ORTHO05D008011 2.3e-26 123.6 123 52.8
Thecc.09G311900 Theobroma cacao HOM05D006436 ORTHO05D008011 3.0e-26 123.2 119 54.6
TAR365G0111 Trochodendron aralioides HOM05D006436 ORTHO05D008011 3.9e-26 122.9 119 56.3
Aqoxy7G01157 Aquilegia oxysepala HOM05D006436 ORTHO05D008011 6.6e-26 122.1 119 53.8
AT5G37290 Arabidopsis thaliana HOM05D006436 ORTHO05D008011 6.6e-26 122.1 121 52.9
FvH4_5g27560 Fragaria vesca HOM05D006436 ORTHO05D008011 8.6e-26 121.7 123 52.8
CsaV3_1G031100 Cucumis sativus L. HOM05D006436 ORTHO05D008011 1.1e-25 121.3 88 68.2
Sabra16G0133900 Salix brachista HOM05D006436 ORTHO05D008011 1.5e-25 120.9 192 41.7
CSS0031788 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 2.5e-25 120.2 123 53.7
arahy.Tifrunner.gnm1.ann1.1G92VG Arachis hypogaea HOM05D006436 ORTHO05D008011 3.3e-25 119.8 119 53.8
Lalb_Chr16g0392121 Lupinus albus HOM05D006436 ORTHO05D008011 5.6e-25 119.0 119 52.1
VMungo0647G0400 Vigna mungo HOM05D006436 ORTHO05D008011 7.3e-25 118.6 123 51.2
Glyma.14G210900 Glycine max HOM05D006436 ORTHO05D008011 9.5e-25 118.2 119 52.1
DCAR_006063 Daucus carota HOM05D006436 ORTHO05D008011 1.2e-24 117.9 119 50.4
Potri.001G225300 Populus trichocarpa HOM05D006436 ORTHO05D008011 1.2e-24 117.9 119 54.6
FAN18G1736 Fragaria x ananassa HOM05D006436 ORTHO05D008011 1.6e-24 117.5 119 52.9
Gohir.A07G101500 Gossypium hirsutum HOM05D006436 ORTHO05D008011 1.6e-24 117.5 119 53.8
Gohir.D07G105500 Gossypium hirsutum HOM05D006436 ORTHO05D008011 1.6e-24 117.5 119 53.8
Gorai.001G113600 Gossypium raimondii HOM05D006436 ORTHO05D008011 1.6e-24 117.5 119 53.8
HanXRQChr10g0309911 Helianthus annuus HOM05D006436 ORTHO05D008011 1.6e-24 117.5 119 52.9
Medtr5g077040 Medicago truncatula HOM05D006436 ORTHO05D008011 1.6e-24 117.5 119 52.1
THA.LOC104823829 Tarenaya hassleriana HOM05D006436 ORTHO05D008011 2.1e-24 117.1 119 52.9
Cpa.g.sc178.16 Carica papaya HOM05D006436 ORTHO05D008011 1.4e-23 114.4 119 52.9
Carub.0007s3243 Capsella rubella HOM05D006436 ORTHO05D008011 1.8e-23 114.0 121 50.4
ClCG01G008580 Citrullus lanatus HOM05D006436 ORTHO05D008011 1.8e-23 114.0 119 52.9
Cc07_g12850 Coffea canephora HOM05D006436 ORTHO05D008011 1.8e-23 114.0 119 51.3
Lj4C253G7 Lonicera japonica HOM05D006436 ORTHO05D008011 1.8e-23 114.0 119 52.9
Hma1.2p1_0158F.1_g069740 Hydrangea macrophylla HOM05D006436 ORTHO05D008011 3.1e-23 113.2 123 51.2
ATR0706G244 Amborella trichopoda HOM05D006436 ORTHO05D008011 5.2e-23 112.5 119 50.4
Peaxi162Scf00442g00063 Petunia axillaris HOM05D006436 ORTHO05D008011 6.8e-23 112.1 119 51.3
PGR042G2272 Punica granatum HOM05D006436 ORTHO05D008011 6.8e-23 112.1 119 52.1
Carub.0007s3240 Capsella rubella HOM05D006436 ORTHO05D008011 8.9e-23 111.7 121 49.6
Sed0003659 Sechium edule HOM05D006436 ORTHO05D008011 1.5e-22 110.9 119 52.9
GSVIVG01035239001 Vitis vinifera HOM05D006436 ORTHO05D008011 2.0e-22 110.5 119 51.3
Nitab4.5_0005193g0010 Nicotiana tabacum HOM05D006436 ORTHO05D008011 2.6e-22 110.2 119 50.4
Rhsim11G0087100 Rhododendron simsii HOM05D006436 ORTHO05D008011 3.4e-22 109.8 118 52.5
Solyc04g014610.4 Solanum lycopersicum HOM05D006436 ORTHO05D008011 3.4e-22 109.8 119 50.4
Sopen04g006750 Solanum pennellii HOM05D006436 ORTHO05D008011 3.4e-22 109.8 119 50.4
CARHR215800 Cardamine hirsuta HOM05D006436 ORTHO05D008011 5.8e-22 109.0 124 47.6
SGA_v2.0_scaffold24G10269 Striga asiatica HOM05D006436 ORTHO05D008011 5.8e-22 109.0 125 48.0
Nitab4.5_0012165g0010 Nicotiana tabacum HOM05D006436 ORTHO05D008011 1.3e-21 107.8 119 49.6
Sopen04g027290 Solanum pennellii HOM05D006436 ORTHO05D008011 1.7e-21 107.5 119 49.6
PGSC0003DMG400024110 Solanum tuberosum HOM05D006436 ORTHO05D008011 1.7e-21 107.5 119 49.6
Thhalv10027956m.g Eutrema salsugineum HOM05D006436 ORTHO05D008011 2.2e-21 107.1 121 48.8
Sp1g30670 Schrenkiella parvula HOM05D006436 ORTHO05D008011 2.9e-21 106.7 124 48.4
CAN.G268.8 Capsicum annuum HOM05D006436 ORTHO05D008011 3.7e-21 106.3 119 48.7
Zm00001eb188680 Zea mays HOM05D006436 ORTHO05D008011 3.7e-21 106.3 119 47.1
BcaB03g13643 Brassica carinata HOM05D006436 ORTHO05D008011 6.4e-21 105.5 124 48.4
Solyc04g071330.4 Solanum lycopersicum HOM05D006436 ORTHO05D008011 6.4e-21 105.5 119 48.7
Os11g0546200 Oryza sativa ssp. japonica HOM05D006436 ORTHO05D008011 8.3e-21 105.1 121 43.8
MELO3C025074.2 Cucumis melo HOM05D006436 ORTHO05D008011 1.1e-20 104.8 119 50.4
Oeu012529.1 Olea europaea HOM05D006436 ORTHO05D008011 1.1e-20 104.8 119 49.6
BcaC01g04932 Brassica carinata HOM05D006436 ORTHO05D008011 1.4e-20 104.4 120 48.3
Dinv19074 Davidia involucrata HOM05D006436 ORTHO05D008011 1.9e-20 104.0 119 48.7
AL7G45650 Arabidopsis lyrata HOM05D006436 ORTHO05D008011 3.2e-20 103.2 124 47.6
CsaV3_5G020600 Cucumis sativus L. HOM05D006436 ORTHO05D008011 3.2e-20 103.2 119 48.7
HPP92_004857 Vanilla planifolia HOM05D006436 ORTHO05D008011 2.7e-19 100.1 119 46.2
Lsat_1_v5_gn_5_79100 Lactuca sativa HOM05D006436 ORTHO05D008011 3.5e-19 99.8 119 46.2
vmacro01486 Vaccinium macrocarpon HOM05D006436 ORTHO05D008011 3.5e-19 99.8 119 48.7
FAN13G2473 Fragaria x ananassa HOM05D006436 ORTHO05D008011 1.3e-18 97.8 61 72.1
COL.COLO4_18608 Corchorus olitorius HOM05D006436 ORTHO05D008011 3.0e-18 96.7 111 48.6
Oeu039710.1 Olea europaea HOM05D006436 ORTHO05D008011 3.0e-18 96.7 119 46.2
AagrBONN_evm.TU.Sc2ySwM_368.3316 Anthoceros agrestis HOM05D006436 ORTHO05D008011 5.1e-18 95.9 82 53.7
CANSAT80G1957 Cannabis sativa HOM05D006436 ORTHO05D008011 6.6e-18 95.5 119 45.4
PSO063G3804 Papaver somniferum HOM05D006436 ORTHO05D008011 4.3e-17 92.8 118 44.1
unitig_61.g26181 Utricularia gibba HOM05D006436 ORTHO05D008011 7.3e-17 92.0 138 39.9
MSTRG.12143 Avicennia marina HOM05D006436 ORTHO05D008011 2.0e-14 84.0 119 42.0
Haze_10727 Corylus avellana HOM05D006436 ORTHO05D008011 7.6e-14 82.0 50 80.0
Aa31LG5G11620 Aethionema arabicum HOM05D006436 ORTHO05D008011 9.9e-14 81.6 124 41.1
Migut.A01047 Erythranthe guttata HOM05D006436 ORTHO05D008011 4.9e-13 79.3 119 37.8
EL10Ac5g11211 Beta vulgaris HOM05D006436 ORTHO05D008011 1.7e-10 70.9 125 36.0
Dinv28234 Davidia involucrata HOM05D006436 ORTHO05D008011 2.1e-08 63.9 90 40.0
RcHm_v2.0_Chr4g0394581 Rosa chinensis HOM05D004344 ORTHO05D006026 6.2e-08 62.4 51 60.8
AUR62028451 Chenopodium quinoa HOM05D003339 ORTHO05D003847 1.1e-07 61.6 124 33.1
SEGI_00674 Sequoiadendron giganteum HOM05D006436 ORTHO05D008011 5.2e-07 59.3 53 49.1
SalBow6G7138 Salvia bowleyana HOM05D006436 ORTHO05D008011 8.9e-07 58.5 119 31.9
Ah.14g085550 Amaranthus hybridus HOM05D000477 ORTHO05D000338 5.8e-06 55.8 35 68.6
AUR62026125 Chenopodium quinoa HOM05D003339 ORTHO05D003847 9.9e-06 55.1 33 69.7
AUR62026126 Chenopodium quinoa HOM05D006436 ORTHO05D008011 9.9e-06 55.1 33 69.7


User provided reference genes

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