Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_14269 Corylus avellana HOM05D006714 ORTHO05D008103 0.0e+00 1615.9 809 100.0
Cfa007804 Carpinus fangiana HOM05D006714 ORTHO05D008103 0.0e+00 1357.0 809 86.8
QL10p014398 Quercus lobata HOM05D006714 ORTHO05D008103 6.1e-253 877.9 953 55.5
QL02p058308 Quercus lobata HOM05D006714 ORTHO05D008103 2.6e-251 872.5 1021 52.9
RcHm_v2.0_Chr2g0123431 Rosa chinensis HOM05D006714 ORTHO05D008103 1.1e-185 654.4 802 47.8
MD15G1138100 Malus domestica HOM05D006714 ORTHO05D008103 5.1e-183 645.6 800 50.0
CiPaw.03G072500 Carya illinoinensis HOM05D006714 ORTHO05D008103 1.1e-177 627.9 435 73.8
Dinv28198 Davidia involucrata HOM05D006714 ORTHO05D008103 4.8e-173 612.5 792 48.0
FAN19G0408 Fragaria x ananassa HOM05D005230 ORTHO05D006506 1.1e-166 591.3 782 45.3
FvH4_1g25400 Fragaria vesca HOM05D006714 ORTHO05D008103 2.2e-165 587.0 705 48.1
GSVIVG01030704001 Vitis vinifera HOM05D006714 ORTHO05D008103 4.8e-165 585.9 805 44.6
FAN23G2031 Fragaria x ananassa HOM05D006714 ORTHO05D008103 1.6e-163 580.9 818 44.7
FAN26G1526 Fragaria x ananassa HOM05D006714 ORTHO05D008103 7.7e-163 578.6 817 44.4
TAR629G3521 Trochodendron aralioides HOM05D006714 ORTHO05D008103 1.9e-153 547.4 989 38.7
Duzib211G0559 Durio zibethinus HOM05D006714 ORTHO05D008103 3.6e-152 543.1 682 47.7
Ciclev10011142m.g Citrus clementina HOM05D006714 ORTHO05D008103 1.5e-150 537.7 652 48.8
CANSAT78G1609 Cannabis sativa HOM05D006714 ORTHO05D008103 1.4e-148 531.2 714 47.1
Thecc.04G114100 Theobroma cacao HOM05D006714 ORTHO05D008103 1.0e-146 525.0 677 46.5
Prupe.4G281200 Prunus persica HOM05D006714 ORTHO05D008103 4.0e-143 513.1 729 46.4
Rhsim08G0018800 Rhododendron simsii HOM05D006714 ORTHO05D008103 1.5e-142 511.1 794 42.9
arahy.Tifrunner.gnm1.ann1.ZV72ZC Arachis hypogaea HOM05D006714 ORTHO05D008103 2.6e-142 510.4 659 46.0
Gohir.A07G178400 Gossypium hirsutum HOM05D006714 ORTHO05D008103 3.4e-142 510.0 681 46.3
Nn4g24295 Nelumbo nucifera HOM05D006714 ORTHO05D008103 1.1e-140 505.0 680 45.9
arahy.Tifrunner.gnm1.ann1.E1Z4YV Arachis hypogaea HOM05D006714 ORTHO05D008103 1.8e-140 504.2 659 45.7
Manes.02G077300 Manihot esculenta HOM05D006714 ORTHO05D008103 4.1e-140 503.1 402 61.4
Gohir.D07G184700 Gossypium hirsutum HOM05D006714 ORTHO05D008103 7.0e-140 502.3 692 45.8
Potri.017G130400 Populus trichocarpa HOM05D006714 ORTHO05D008103 1.6e-139 501.1 615 47.0
Gorai.001G205100 Gossypium raimondii HOM05D006714 ORTHO05D008103 1.0e-138 498.4 680 45.4
Sabra17G0108600 Salix brachista HOM05D006714 ORTHO05D008103 1.2e-136 491.5 611 46.6
Hma1.2p1_0158F.1_g070140 Hydrangea macrophylla HOM05D006714 ORTHO05D008103 6.1e-136 489.2 389 65.3
TWI77G0889 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 1.4e-135 488.0 662 44.6
Ca_05830_v3 Cicer arietinum L. HOM05D006714 ORTHO05D008103 9.8e-134 481.9 632 45.9
Dinv19038 Davidia involucrata HOM05D006714 ORTHO05D008103 2.4e-132 477.2 741 43.9
vmacro18531 Vaccinium macrocarpon HOM05D006714 ORTHO05D008103 5.4e-132 476.1 788 40.7
Medtr5g078170 Medicago truncatula HOM05D006714 ORTHO05D008103 2.0e-131 474.2 643 44.5
Cc07_g13380 Coffea canephora HOM05D006714 ORTHO05D008103 7.8e-131 472.2 825 41.1
TWI74G0031 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 3.0e-130 470.3 485 52.8
CsaV3_5G024210 Cucumis sativus L. HOM05D006714 ORTHO05D008103 5.6e-129 466.1 644 44.9
LjContig00141g0000721 Lotus japonicus HOM05D006714 ORTHO05D008103 2.8e-128 463.8 578 48.1
Hund13103 Selenicereus undatus HOM05D006714 ORTHO05D008103 4.7e-128 463.0 668 44.5
Lalb_Chr04g0251401 Lupinus albus HOM05D006714 ORTHO05D008103 5.2e-127 459.5 616 46.4
SalBow5G2523 Salvia bowleyana HOM05D006714 ORTHO05D008103 7.5e-126 455.7 415 56.9
Nitab4.5_0000201g0160 Nicotiana tabacum HOM05D006714 ORTHO05D008103 2.9e-125 453.8 432 54.9
ClCG01G008770 Citrullus lanatus HOM05D006714 ORTHO05D008103 1.4e-124 451.4 624 44.6
SGA_v2.0_scaffold45G17176 Striga asiatica HOM05D006714 ORTHO05D008103 5.4e-124 449.5 601 44.4
VMungo0647G1195 Vigna mungo HOM05D006714 ORTHO05D008103 6.0e-123 446.0 632 43.4
Oeu032319.1 Olea europaea HOM05D006714 ORTHO05D008103 1.3e-122 444.9 320 68.1
TPR.G8266 Trifolium pratense HOM05D006714 ORTHO05D008103 1.3e-122 444.9 653 42.1
Sed0011157 Sechium edule HOM05D006714 ORTHO05D008103 3.6e-120 436.8 710 41.4
Migut.K00904 Erythranthe guttata HOM05D006714 ORTHO05D008103 1.1e-116 425.2 457 52.3
EL10Ac2g03178 Beta vulgaris HOM05D006714 ORTHO05D008103 2.4e-116 424.1 612 44.1
PGR031G2162 Punica granatum HOM05D006714 ORTHO05D008103 3.2e-116 423.7 421 53.7
Nitab4.5_0006893g0050 Nicotiana tabacum HOM05D006714 ORTHO05D008103 1.2e-115 421.8 638 42.2
HanXRQChr15g0483231 Helianthus annuus HOM05D006714 ORTHO05D008103 2.1e-115 421.0 386 59.3
PSO017G5883 Papaver somniferum HOM05D006714 ORTHO05D008103 2.7e-115 420.6 349 59.6
DCAR_014171 Daucus carota HOM05D006714 ORTHO05D008103 1.7e-114 417.9 618 44.0
Aqoxy1G00382 Aquilegia oxysepala HOM05D006714 ORTHO05D008103 1.5e-113 414.8 402 54.5
ECA247G1081 Erigeron canadensis HOM05D006714 ORTHO05D008103 4.3e-113 413.3 590 43.6
Cpa.g.sc116.59 Carica papaya HOM05D006714 ORTHO05D008103 5.6e-113 412.9 461 50.3
AUR62018218 Chenopodium quinoa HOM05D006714 ORTHO05D008103 1.4e-111 408.3 400 54.5
Solyc11g011060.3 Solanum lycopersicum HOM05D006714 ORTHO05D008103 5.2e-111 406.4 378 55.6
Sopen11g005830 Solanum pennellii HOM05D006714 ORTHO05D008103 5.2e-111 406.4 378 55.6
CAN.G222.36 Capsicum annuum HOM05D006714 ORTHO05D008103 4.4e-110 403.3 379 56.5
AUR62037796 Chenopodium quinoa HOM05D006714 ORTHO05D008103 1.1e-108 398.7 281 67.6
THA.LOC104820908 Tarenaya hassleriana HOM05D006714 ORTHO05D008103 3.0e-106 390.6 329 60.5
Aa31LG11G13040 Aethionema arabicum HOM05D006714 ORTHO05D008103 3.3e-105 387.1 381 53.8
Sp6g27560 Schrenkiella parvula HOM05D006714 ORTHO05D008103 6.2e-104 382.9 577 43.5
CARHR196610 Cardamine hirsuta HOM05D006714 ORTHO05D008103 2.4e-103 380.9 636 41.0
Carub.0006s1481 Capsella rubella HOM05D006714 ORTHO05D008103 3.1e-103 380.6 352 56.0
AT5G16610 Arabidopsis thaliana HOM05D006714 ORTHO05D008103 9.0e-103 379.0 606 41.1
Thhalv10012945m.g Eutrema salsugineum HOM05D006714 ORTHO05D008103 1.2e-102 378.6 373 53.4
Glyma.14G214400 Glycine max HOM05D006714 ORTHO05D008103 1.9e-100 371.3 572 42.1
AL6G27570 Arabidopsis lyrata HOM05D006714 ORTHO05D008103 2.1e-99 367.9 321 57.3
Lsat_1_v5_gn_3_63641 Lactuca sativa HOM05D006714 ORTHO05D008103 1.7e-98 364.8 446 49.8
ATR0171G009 Amborella trichopoda HOM05D006714 ORTHO05D008103 2.6e-94 350.9 478 43.1
BraA10t44322Z Brassica rapa HOM05D006714 ORTHO05D008103 9.9e-94 349.0 591 39.9
SalBow5G2948 Salvia bowleyana HOM05D006714 ORTHO05D008103 1.3e-93 348.6 404 49.0
HPP92_011112 Vanilla planifolia HOM05D006714 ORTHO05D008103 2.9e-93 347.4 328 55.5
C09p60510 Brassica napus HOM05D006714 ORTHO05D008103 8.4e-93 345.9 287 59.2
BolC9t58884H Brassica oleracea HOM05D006714 ORTHO05D008103 8.4e-93 345.9 287 59.2
A10p22600 Brassica napus HOM05D006714 ORTHO05D008103 1.9e-92 344.7 610 39.0
HPP92_011097 Vanilla planifolia HOM05D006714 ORTHO05D008103 3.5e-91 340.5 328 54.9
SHI30108 Sapria himalayana HOM05D006714 ORTHO05D008103 2.3e-90 337.8 318 55.0
BcaB08g36834 Brassica carinata HOM05D006714 ORTHO05D008103 1.1e-89 335.5 289 57.8
QL93p0100_0723 Quercus lobata HOM05D006714 ORTHO05D008103 2.5e-89 334.3 322 62.7
Sc11g0004560 Simmondsia chinensis HOM05D006714 ORTHO05D008103 5.3e-87 326.6 623 39.8
Atru.chr1.1942 Acer truncatum HOM05D006714 ORTHO05D008103 4.9e-85 320.1 209 71.3
Os03g0221300 Oryza sativa ssp. japonica HOM05D006714 ORTHO05D008103 6.4e-85 319.7 296 56.1
CDE07G1834 Ceratophyllum demersum HOM05D006714 ORTHO05D008103 1.6e-83 315.1 396 44.2
unitig_748.g8636 Utricularia gibba HOM05D006714 ORTHO05D008103 1.5e-81 308.5 351 49.9
PSO478G0421 Papaver somniferum HOM05D006714 ORTHO05D008103 2.5e-81 307.8 255 59.6
Peaxi162Scf00305g00412 Petunia axillaris HOM05D006714 ORTHO05D008103 3.3e-81 307.4 212 68.4
PSO063G0106 Papaver somniferum HOM05D006714 ORTHO05D008103 4.0e-79 300.4 237 61.2
QL93p0100_0715 Quercus lobata HOM05D006714 ORTHO05D008103 1.6e-67 261.9 253 59.7
Actinidia28805 Actinidia chinensis HOM05D006714 ORTHO05D008103 6.1e-67 260.0 177 72.3
Psat2g047840 Pisum sativum HOM05D006714 ORTHO05D008103 7.4e-65 253.1 268 51.5
Pp3c23_20330 Physcomitrium patens HOM05D006714 ORTHO05D008103 9.1e-63 246.1 260 46.5
Pp3c24_16350 Physcomitrium patens HOM05D006714 ORTHO05D008103 1.0e-61 242.7 325 41.2
Actinidia35727 Actinidia chinensis HOM05D006714 ORTHO05D008103 1.9e-60 238.4 377 41.1
Phvul.008G236600 Phaseolus vulgaris HOM05D006714 ORTHO05D008103 3.6e-59 234.2 500 34.8
QL93p0100_0731 Quercus lobata HOM05D006714 ORTHO05D008103 2.4e-55 221.5 117 86.3
CBR_g12792 Chara braunii HOM05D006714 ORTHO05D008103 9.1e-55 219.5 268 41.8
CSS0036373 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 2.0e-54 218.4 301 46.8
MELO3C022869.2 Cucumis melo HOM05D006714 ORTHO05D008103 3.8e-53 214.2 627 30.6
SEGI_28129 Sequoiadendron giganteum HOM05D006714 ORTHO05D008103 6.5e-53 213.4 320 43.1
CSS0024067 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 8.0e-51 206.5 295 46.1
Eucgr.F02863 Eucalyptus grandis HOM05D006714 ORTHO05D008103 5.2e-50 203.8 119 77.3
SMO340G0205 Selaginella moellendorffii HOM05D006714 ORTHO05D008103 4.8e-48 197.2 181 48.1
Atru.chr1.1941 Acer truncatum HOM05D006714 ORTHO05D008103 1.6e-35 155.6 438 32.4
Peaxi162Scf00305g00413 Petunia axillaris HOM05D006714 ORTHO05D008103 7.7e-30 136.7 166 48.8
CiPaw.03G072400 Carya illinoinensis HOM05D006714 ORTHO05D008103 1.4e-15 89.4 78 60.3
CSS0018819 Camellia sinensis var. sinensis HOM05D060064 ORTHO05D043302 2.2e-08 65.5 102 41.2
CSS0029132 Camellia sinensis var. sinensis HOM05D060064 ORTHO05D043302 2.2e-08 65.5 102 41.2


User provided reference genes

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