Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_14202 Corylus avellana HOM05D007637 ORTHO05D009508 1.1e-56 223.0 111 100.0
Cfa007872 Carpinus fangiana HOM05D007637 ORTHO05D009508 9.6e-40 166.8 90 91.1
CiPaw.04G044900 Carya illinoinensis HOM05D007637 ORTHO05D009508 2.0e-29 132.5 106 63.2
Thecc.04G125100 Theobroma cacao HOM05D007637 ORTHO05D009508 1.8e-22 109.4 90 64.4
GSVIVG01030920001 Vitis vinifera HOM05D007637 ORTHO05D009508 1.5e-21 106.3 90 60.0
TAR629G1467 Trochodendron aralioides HOM05D007637 ORTHO05D009508 4.5e-21 104.8 90 60.0
Lj1g0007116 Lotus japonicus HOM05D007637 ORTHO05D009508 1.0e-20 103.6 87 57.5
Prupe.3G151000 Prunus persica HOM05D007637 ORTHO05D009508 1.3e-20 103.2 93 57.0
GSVIVG01030918001 Vitis vinifera HOM05D007637 ORTHO05D009508 2.2e-20 102.4 90 60.0
GSVIVG01030917001 Vitis vinifera HOM05D007637 ORTHO05D009508 4.9e-20 101.3 90 58.9
CSS0034381 Camellia sinensis var. sinensis HOM05D007637 ORTHO05D009508 8.4e-20 100.5 90 57.8
Dinv14862 Davidia involucrata HOM05D007637 ORTHO05D009508 4.2e-19 98.2 90 57.8
MD09G1259400 Malus domestica HOM05D007637 ORTHO05D009508 5.5e-19 97.8 89 55.1
Gohir.A07G075400 Gossypium hirsutum HOM05D007637 ORTHO05D009508 7.1e-19 97.4 88 58.0
Gohir.D07G079900 Gossypium hirsutum HOM05D007637 ORTHO05D009508 7.1e-19 97.4 88 59.1
Gorai.001G084700 Gossypium raimondii HOM05D007637 ORTHO05D009508 7.1e-19 97.4 88 59.1
Hma1.2p1_0283F.1_g113660 Hydrangea macrophylla HOM05D007637 ORTHO05D009508 9.3e-19 97.1 89 56.2
Oeu047428.1 Olea europaea HOM05D007637 ORTHO05D009508 9.3e-19 97.1 87 51.7
MD09G1259200 Malus domestica HOM05D007637 ORTHO05D009508 1.6e-18 96.3 105 49.5
Gohir.D07G182150 Gossypium hirsutum HOM05D007637 ORTHO05D009508 3.5e-18 95.1 91 56.0
Gorai.001G203000 Gossypium raimondii HOM05D007637 ORTHO05D009508 3.5e-18 95.1 91 56.0
TAR374G0670 Trochodendron aralioides HOM05D007637 ORTHO05D009508 7.9e-18 94.0 90 53.3
Gohir.A07G175550 Gossypium hirsutum HOM05D007637 ORTHO05D009508 1.3e-17 93.2 91 54.9
Ciclev10013623m.g Citrus clementina HOM05D007637 ORTHO05D009508 8.7e-17 90.5 89 50.6
Duzib133G0287 Durio zibethinus HOM05D007637 ORTHO05D009508 8.7e-17 90.5 90 53.3
Potri.017G122100 Populus trichocarpa HOM05D007637 ORTHO05D009508 2.5e-16 89.0 93 52.7
Dinv16187 Davidia involucrata HOM05D007637 ORTHO05D009508 4.3e-16 88.2 85 50.6
TPR.G28401 Trifolium pratense HOM05D007637 ORTHO05D009508 4.3e-16 88.2 90 52.2
Sabra04G0062800 Salix brachista HOM05D007637 ORTHO05D009508 5.7e-16 87.8 103 48.5
Manes.02G073000 Manihot esculenta HOM05D007637 ORTHO05D009508 9.7e-16 87.0 90 51.1
Dinv33980 Davidia involucrata HOM05D007637 ORTHO05D009508 1.3e-15 86.7 75 60.0
Gohir.D07G182500 Gossypium hirsutum HOM05D007637 ORTHO05D009508 1.6e-15 86.3 89 51.7
Medtr7g082920 Medicago truncatula HOM05D007637 ORTHO05D009508 2.2e-15 85.9 90 52.2
Psat3g096920 Pisum sativum HOM05D007637 ORTHO05D009508 2.8e-15 85.5 98 49.0
TAR622G1280 Trochodendron aralioides HOM05D007637 ORTHO05D009508 3.7e-15 85.1 65 61.5
Sabra10G0085700 Salix brachista HOM05D004972 ORTHO05D006309 4.8e-15 84.7 87 46.0
Sabra10G0087400 Salix brachista HOM05D004972 ORTHO05D006309 4.8e-15 84.7 87 46.0
Manes.01G114400 Manihot esculenta HOM05D007637 ORTHO05D009508 8.2e-15 84.0 83 48.2
Potri.010G115900 Populus trichocarpa HOM05D007637 ORTHO05D009508 8.2e-15 84.0 90 45.6
SalBow3G1214 Salvia bowleyana HOM05D007637 ORTHO05D009508 8.2e-15 84.0 88 55.7
SalBow3G3066 Salvia bowleyana HOM05D007637 ORTHO05D009508 8.2e-15 84.0 88 55.7
Actinidia36353 Actinidia chinensis HOM05D007637 ORTHO05D009508 1.1e-14 83.6 91 51.6
Glyma.18G292400 Glycine max HOM05D007637 ORTHO05D009508 1.1e-14 83.6 89 48.3
DCAR_010721 Daucus carota HOM05D007637 ORTHO05D009508 1.4e-14 83.2 90 48.9
Gorai.001G203100 Gossypium raimondii HOM05D007637 ORTHO05D009508 1.8e-14 82.8 89 49.4
Manes.14G136000 Manihot esculenta HOM05D007637 ORTHO05D009508 1.8e-14 82.8 88 45.5
Lalb_Chr17g0336081 Lupinus albus HOM05D007637 ORTHO05D009508 2.4e-14 82.4 115 40.0
Manes.02G073100 Manihot esculenta HOM05D007637 ORTHO05D009508 3.1e-14 82.0 108 40.7
Oeu007437.1 Olea europaea HOM05D007637 ORTHO05D009508 3.1e-14 82.0 87 43.7
Phvul.008G009500 Phaseolus vulgaris HOM05D007637 ORTHO05D009508 4.1e-14 81.6 100 46.0
Eucgr.J01536 Eucalyptus grandis HOM05D007637 ORTHO05D009508 9.0e-14 80.5 90 51.1
Glyma.02G090700 Glycine max HOM05D007637 ORTHO05D009508 9.0e-14 80.5 88 48.9
MBI10_g37696_MAGBIO Magnolia biondii HOM05D007637 ORTHO05D009508 1.5e-13 79.7 90 50.0
Thecc.04G124800 Theobroma cacao HOM05D007637 ORTHO05D009508 2.0e-13 79.3 64 60.9
arahy.Tifrunner.gnm1.ann1.AC9JIC Arachis hypogaea HOM05D007637 ORTHO05D009508 2.6e-13 79.0 105 44.8
arahy.Tifrunner.gnm1.ann1.BY2X14 Arachis hypogaea HOM05D007637 ORTHO05D009508 2.6e-13 79.0 105 44.8
Manes.06G062300 Manihot esculenta HOM05D007637 ORTHO05D009508 4.5e-13 78.2 86 45.3
Sed0013286 Sechium edule HOM05D007637 ORTHO05D009508 4.5e-13 78.2 89 40.4
Lalb_Chr17g0336031 Lupinus albus HOM05D007637 ORTHO05D009508 1.0e-12 77.0 93 46.2
COL.COLO4_38443 Corchorus olitorius HOM05D007637 ORTHO05D009508 2.2e-12 75.9 64 60.9
Eucgr.J01537 Eucalyptus grandis HOM05D007637 ORTHO05D009508 2.9e-12 75.5 88 48.9
QL02p049171 Quercus lobata HOM05D007637 ORTHO05D009508 2.9e-12 75.5 50 66.0
Rhsim10G0078000 Rhododendron simsii HOM05D007637 ORTHO05D009508 3.8e-12 75.1 84 46.4
Phvul.007G035600 Phaseolus vulgaris HOM05D007637 ORTHO05D009508 6.5e-12 74.3 87 42.5
Glyma.10G266100 Glycine max HOM05D007637 ORTHO05D009508 1.4e-11 73.2 82 45.1
PGR042G0465 Punica granatum HOM05D007637 ORTHO05D009508 1.4e-11 73.2 85 43.5
Atru.chr1.1552 Acer truncatum HOM05D007637 ORTHO05D009508 4.2e-11 71.6 84 48.8
VMungo1383G3686 Vigna mungo HOM05D007637 ORTHO05D009508 5.5e-11 71.2 81 44.4
Solyc02g091193.1 Solanum lycopersicum HOM05D007637 ORTHO05D009508 7.2e-11 70.9 95 38.9
ATR0326G042 Amborella trichopoda HOM05D007637 ORTHO05D009508 1.2e-10 70.1 101 38.6
Rhsim09G0068300 Rhododendron simsii HOM05D007637 ORTHO05D009508 1.2e-10 70.1 87 47.1
Solyc04g007585.1 Solanum lycopersicum HOM05D007637 ORTHO05D009508 1.6e-10 69.7 87 42.5
Actinidia31983 Actinidia chinensis HOM05D007637 ORTHO05D009508 2.7e-10 68.9 48 64.6
Nitab4.5_0005700g0020 Nicotiana tabacum HOM05D007637 ORTHO05D009508 2.7e-10 68.9 93 40.9
QL01p002403 Quercus lobata HOM05D006556 ORTHO05D008146 3.6e-10 68.6 67 52.2
Cpa.g.sc116.6 Carica papaya HOM05D007637 ORTHO05D009508 4.6e-10 68.2 87 42.5
CiPaw.05G246900 Carya illinoinensis HOM05D007637 ORTHO05D009508 4.6e-10 68.2 87 47.1
Eucgr.J01538 Eucalyptus grandis HOM05D007637 ORTHO05D009508 4.6e-10 68.2 89 43.8
Actinidia33410 Actinidia chinensis HOM05D007637 ORTHO05D009508 6.1e-10 67.8 63 54.0
TWI79G1694 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 6.1e-10 67.8 92 44.6
Actinidia15914 Actinidia chinensis HOM05D007637 ORTHO05D009508 7.9e-10 67.4 93 44.1
Glyma.20G124500 Glycine max HOM05D007637 ORTHO05D009508 7.9e-10 67.4 82 41.5
TWI74G0234 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 7.9e-10 67.4 90 46.7
Ciclev10017462m.g Citrus clementina HOM05D007637 ORTHO05D009508 1.0e-09 67.0 90 42.2
PGSC0003DMG400030637 Solanum tuberosum HOM05D007637 ORTHO05D009508 1.4e-09 66.6 89 39.3
MBI16_g21183_MAGBIO Magnolia biondii HOM05D007637 ORTHO05D009508 1.8e-09 66.2 49 63.3
Rhsim10G0078100 Rhododendron simsii HOM05D007637 ORTHO05D009508 1.8e-09 66.2 78 46.2
HanXRQChr09g0262411 Helianthus annuus HOM05D007637 ORTHO05D009508 3.9e-09 65.1 87 40.2
HanXRQChr09g0262421 Helianthus annuus HOM05D007637 ORTHO05D009508 1.1e-08 63.5 87 41.4
Lsat_1_v5_gn_4_155320 Lactuca sativa HOM05D007637 ORTHO05D009508 2.5e-08 62.4 83 41.0
Eucgr.G02214 Eucalyptus grandis HOM05D007637 ORTHO05D009508 9.7e-08 60.5 91 39.6
arahy.Tifrunner.gnm1.ann1.NE5PRN Arachis hypogaea HOM05D026189 ORTHO05D009508 3.7e-07 58.5 93 36.6
arahy.Tifrunner.gnm1.ann1.K3RR71 Arachis hypogaea HOM05D026189 ORTHO05D009508 8.2e-07 57.4 92 35.9
arahy.Tifrunner.gnm1.ann1.4UH4YI Arachis hypogaea HOM05D026189 ORTHO05D009508 2.4e-06 55.8 92 34.8
Glyma.10G112600 Glycine max HOM05D007637 ORTHO05D009508 2.4e-06 55.8 65 44.6
Nitab4.5_0002456g0100 Nicotiana tabacum HOM05D007637 ORTHO05D009508 4.1e-06 55.1 70 40.0
Nitab4.5_0002456g0080 Nicotiana tabacum HOM05D007637 ORTHO05D009508 5.3e-06 54.7 70 42.9


User provided reference genes

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