Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_14141 Corylus avellana HOM05D003845 ORTHO05D004161 9.6e-181 636.7 326 100.0
FvH4_6g45230 Fragaria vesca HOM05D003845 ORTHO05D004161 5.8e-85 318.5 423 49.4
RcHm_v2.0_Chr2g0162941 Rosa chinensis HOM05D003845 ORTHO05D004161 7.6e-85 318.2 422 49.5
MD14G1001900 Malus domestica HOM05D003845 ORTHO05D004161 8.4e-84 314.7 421 49.6
CiPaw.04G040900 Carya illinoinensis HOM05D003845 ORTHO05D004161 1.1e-83 314.3 422 48.8
MD12G1002400 Malus domestica HOM05D003845 ORTHO05D004161 6.0e-82 308.5 422 48.8
FAN02G2813 Fragaria x ananassa HOM05D003845 ORTHO05D004161 7.8e-82 308.1 452 45.8
Prupe.7G002300 Prunus persica HOM05D003845 ORTHO05D004161 1.5e-80 303.9 417 48.9
MELO3C022095.2 Cucumis melo HOM05D003845 ORTHO05D004161 7.3e-80 301.6 423 46.1
Potri.004G101250 Populus trichocarpa HOM05D003845 ORTHO05D004161 6.2e-79 298.5 422 46.0
CsaV3_5G039200 Cucumis sativus L. HOM05D003845 ORTHO05D004161 8.1e-79 298.1 423 45.6
Atru.chr8.887 Acer truncatum HOM05D003845 ORTHO05D004161 6.9e-78 295.0 422 46.0
Sed0012635 Sechium edule HOM05D003845 ORTHO05D004161 6.9e-78 295.0 423 45.4
Thecc.04G136100 Theobroma cacao HOM05D003845 ORTHO05D004161 6.9e-78 295.0 422 45.7
FAN14G4373 Fragaria x ananassa HOM05D003845 ORTHO05D004161 9.0e-78 294.7 509 41.7
Dinv33933 Davidia involucrata HOM05D003845 ORTHO05D004161 1.5e-77 293.9 422 47.9
TWI53G0876 Tripterygium wilfordii HOM05D003845 ORTHO05D004161 2.6e-77 293.1 423 45.9
Manes.02G067500 Manihot esculenta HOM05D003845 ORTHO05D004161 3.4e-77 292.7 428 45.8
TAR629G0674 Trochodendron aralioides HOM05D003845 ORTHO05D004161 9.9e-77 291.2 422 46.2
Duzib133G1200 Durio zibethinus HOM05D003845 ORTHO05D004161 1.7e-76 290.4 422 45.0
GSVIVG01031064001 Vitis vinifera HOM05D003845 ORTHO05D004161 2.9e-76 289.7 473 42.7
Actinidia36313 Actinidia chinensis HOM05D003845 ORTHO05D004161 1.1e-75 287.7 422 46.4
Medtr7g406950 Medicago truncatula HOM05D003845 ORTHO05D004161 4.2e-75 285.8 422 44.8
Hma1.2p1_0136F.1_g062170 Hydrangea macrophylla HOM05D003845 ORTHO05D004161 5.4e-75 285.4 422 45.7
Hma1.2p1_0136F.1_g062180 Hydrangea macrophylla HOM05D003845 ORTHO05D004161 5.4e-75 285.4 422 45.7
CSS0012709 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 1.6e-74 283.9 427 45.7
CANSAT64G2814 Cannabis sativa HOM05D003845 ORTHO05D004161 2.7e-74 283.1 422 47.2
Glyma.18G297900 Glycine max HOM05D003845 ORTHO05D004161 3.5e-74 282.7 422 45.3
Lj1g0009000 Lotus japonicus HOM05D003845 ORTHO05D004161 1.3e-73 280.8 422 44.3
arahy.Tifrunner.gnm1.ann1.4V7WUF Arachis hypogaea HOM05D003845 ORTHO05D004161 1.7e-73 280.4 418 45.7
arahy.Tifrunner.gnm1.ann1.UJVA95 Arachis hypogaea HOM05D003845 ORTHO05D004161 1.7e-73 280.4 418 45.7
Gohir.D07G076100 Gossypium hirsutum HOM05D003845 ORTHO05D004161 1.5e-72 277.3 418 44.7
Nn4g23790 Nelumbo nucifera HOM05D003845 ORTHO05D004161 1.5e-72 277.3 422 43.6
Eucgr.F02484 Eucalyptus grandis HOM05D003845 ORTHO05D004161 3.3e-72 276.2 419 45.3
Gohir.A07G071701 Gossypium hirsutum HOM05D003845 ORTHO05D004161 4.3e-72 275.8 419 44.6
Phvul.008G004700 Phaseolus vulgaris HOM05D003845 ORTHO05D004161 2.1e-71 273.5 422 43.8
Nitab4.5_0002288g0020 Nicotiana tabacum HOM05D003845 ORTHO05D004161 2.8e-71 273.1 417 43.4
Lalb_Chr21g0317871 Lupinus albus HOM05D003845 ORTHO05D004161 3.6e-71 272.7 423 44.4
Gorai.001G080300 Gossypium raimondii HOM05D003845 ORTHO05D004161 4.8e-71 272.3 420 44.5
VMungo1383G2489 Vigna mungo HOM05D003845 ORTHO05D004161 1.1e-70 271.2 422 43.6
Sc23g0006880 Simmondsia chinensis HOM05D003845 ORTHO05D004161 1.4e-70 270.8 423 42.6
PGR004G1392 Punica granatum HOM05D003845 ORTHO05D004161 9.0e-70 268.1 421 43.5
Nitab4.5_0001569g0050 Nicotiana tabacum HOM05D003845 ORTHO05D004161 2.6e-69 266.5 394 43.9
Hund16134 Selenicereus undatus HOM05D003845 ORTHO05D004161 3.4e-69 266.2 420 43.3
Carub.0002s1343 Capsella rubella HOM05D003845 ORTHO05D004161 4.5e-69 265.8 438 42.2
CAN.G625.4 Capsicum annuum HOM05D003845 ORTHO05D004161 4.5e-69 265.8 432 41.9
EL10Ac2g04610 Beta vulgaris HOM05D003845 ORTHO05D004161 7.6e-69 265.0 392 45.4
EL10Ac2g04592 Beta vulgaris HOM05D003845 ORTHO05D004161 6.4e-68 261.9 403 43.9
AL2G25520 Arabidopsis lyrata HOM05D003845 ORTHO05D004161 8.4e-68 261.5 427 41.7
Sopen02g030490 Solanum pennellii HOM05D003845 ORTHO05D004161 1.1e-67 261.2 423 41.4
AT1G67140 Arabidopsis thaliana HOM05D003845 ORTHO05D004161 1.9e-67 260.4 427 41.7
Solyc02g085810.3 Solanum lycopersicum HOM05D003845 ORTHO05D004161 2.4e-67 260.0 423 41.1
Aa31LG2G3530 Aethionema arabicum HOM05D003845 ORTHO05D004161 7.1e-67 258.5 423 41.4
BraA07t31006Z Brassica rapa HOM05D003845 ORTHO05D004161 7.9e-66 255.0 423 41.4
Sp5g22090 Schrenkiella parvula HOM05D003845 ORTHO05D004161 1.8e-65 253.8 424 41.5
Thhalv10017993m.g Eutrema salsugineum HOM05D003845 ORTHO05D004161 2.3e-65 253.4 423 40.9
Aqoxy3G03940 Aquilegia oxysepala HOM05D003845 ORTHO05D004161 5.1e-65 252.3 423 40.9
SGA_v2.0_scaffold33G13453 Striga asiatica HOM05D003845 ORTHO05D004161 8.7e-65 251.5 430 40.9
C06p43130 Brassica napus HOM05D003845 ORTHO05D004161 1.1e-64 251.1 422 40.8
BolC6t39126H Brassica oleracea HOM05D003845 ORTHO05D004161 1.1e-64 251.1 422 40.8
ECA232G1957 Erigeron canadensis HOM05D003845 ORTHO05D004161 1.5e-64 250.8 422 41.0
Cc07_g08900 Coffea canephora HOM05D003845 ORTHO05D004161 1.9e-64 250.4 423 42.6
THA.LOC104805559 Tarenaya hassleriana HOM05D003845 ORTHO05D004161 3.3e-64 249.6 424 41.0
A07p33800 Brassica napus HOM05D003845 ORTHO05D004161 9.6e-64 248.1 422 40.5
PSO063G7466 Papaver somniferum HOM05D003845 ORTHO05D004161 2.1e-63 246.9 422 41.7
AUR62014525 Chenopodium quinoa HOM05D003845 ORTHO05D004161 1.4e-62 244.2 422 41.2
Migut.H00208 Erythranthe guttata HOM05D003845 ORTHO05D004161 1.8e-62 243.8 422 41.7
AUR62008978 Chenopodium quinoa HOM05D003845 ORTHO05D004161 2.4e-62 243.4 422 41.2
SalBow3G0178 Salvia bowleyana HOM05D003845 ORTHO05D004161 1.2e-61 241.1 470 38.3
PSO782G1231 Papaver somniferum HOM05D003845 ORTHO05D004161 2.6e-61 240.0 422 41.2
Lsat_1_v5_gn_4_153700 Lactuca sativa HOM05D003845 ORTHO05D004161 7.6e-61 238.4 423 41.1
Peaxi162Scf00814g00242 Petunia axillaris HOM05D003845 ORTHO05D004161 2.9e-60 236.5 338 46.4
QL02p051715 Quercus lobata HOM05D003845 ORTHO05D004161 4.9e-60 235.7 143 85.3
ClCG11G005430 Citrullus lanatus HOM05D003845 ORTHO05D004161 8.4e-60 235.0 134 86.6
HanXRQChr14g0438731 Helianthus annuus HOM05D003845 ORTHO05D004161 2.4e-59 233.4 422 39.3
Ah.10g037590 Amaranthus hybridus HOM05D003845 ORTHO05D004161 3.2e-59 233.0 380 43.9
Ciclev10011943m.g Citrus clementina HOM05D003845 ORTHO05D004161 7.9e-58 228.4 129 85.3
CSS0018407 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 1.3e-55 221.1 129 87.6
vmacro05567 Vaccinium macrocarpon HOM05D003845 ORTHO05D004161 3.7e-55 219.5 129 87.6
Zm00001eb382690 Zea mays HOM05D003845 ORTHO05D004161 6.2e-55 218.8 423 37.8
Ca_03194_v3 Cicer arietinum L. HOM05D003845 ORTHO05D003700 4.0e-54 216.1 129 84.5
Os06g0505302 Oryza sativa ssp. japonica HOM05D003845 ORTHO05D004161 5.8e-53 212.2 446 35.4
HPP92_003934 Vanilla planifolia HOM05D003845 ORTHO05D004161 7.6e-53 211.8 417 37.2
Rhsim09G0080700 Rhododendron simsii HOM05D003845 ORTHO05D004161 1.7e-52 210.7 133 81.2
unitig_899.g14510 Utricularia gibba HOM05D003845 ORTHO05D004161 1.7e-52 210.7 393 37.7
HPP92_003935 Vanilla planifolia HOM05D003845 ORTHO05D004161 2.9e-52 209.9 422 36.7
ATR0564G289 Amborella trichopoda HOM05D003845 ORTHO05D004161 1.9e-48 197.2 131 74.0
Mapoly0101s0033 Marchantia polymorpha HOM05D003845 ORTHO05D004161 5.0e-44 182.6 412 33.3
Lj2C445T15 Lonicera japonica HOM05D003845 ORTHO05D004161 7.2e-43 178.7 105 85.7
SEGI_40473 Sequoiadendron giganteum HOM05D003845 ORTHO05D004161 4.6e-42 176.0 129 69.0
Oeu052985.1 Olea europaea HOM05D003845 ORTHO05D004161 1.7e-39 167.5 345 38.3
Pp3c15_3000 Physcomitrium patens HOM05D003845 ORTHO05D004161 1.7e-39 167.5 412 29.4
SMO239G0031 Selaginella moellendorffii HOM05D003845 ORTHO05D004161 2.0e-37 160.6 401 30.4
SHI17842 Sapria himalayana HOM05D003845 ORTHO05D004161 5.9e-37 159.1 396 32.6
CBR_g31193 Chara braunii HOM05D003845 ORTHO05D004161 2.3e-33 147.1 428 29.9
AagrBONN_evm.TU.Sc2ySwM_368.2329__2330 Anthoceros agrestis HOM05D003845 ORTHO05D004161 4.8e-31 139.4 131 55.0
RcHm_v2.0_Chr2g0163391 Rosa chinensis HOM05D003845 ORTHO05D004161 3.1e-30 136.7 129 62.0
Dinv34837 Davidia involucrata HOM05D003845 ORTHO05D004161 1.2e-29 134.8 87 78.2
CDE02G4394 Ceratophyllum demersum HOM05D003845 ORTHO05D004161 2.0e-29 134.0 145 49.0
Lsat_1_v5_gn_4_153641 Lactuca sativa HOM05D003845 ORTHO05D004161 7.7e-29 132.1 100 75.0
Manes.07G074028 Manihot esculenta HOM05D003845 ORTHO05D004161 1.7e-28 131.0 79 82.3
ClCG11G005440 Citrullus lanatus HOM05D003845 ORTHO05D004161 1.1e-27 128.3 78 80.8
Lj2C445G6 Lonicera japonica HOM05D003845 ORTHO05D004161 3.2e-27 126.7 88 72.7
Cpa.g.sc179.9 Carica papaya HOM05D003845 ORTHO05D004161 4.4e-24 116.3 79 75.9
CARHR059600 Cardamine hirsuta HOM05D003845 ORTHO05D004161 1.8e-22 110.9 80 71.2
Ca_04078_v3 Cicer arietinum L. HOM05D003845 ORTHO05D004161 1.8e-22 110.9 87 64.4
Cpa.g.sc3785.2 Carica papaya HOM05D003845 ORTHO05D004161 2.4e-22 110.5 75 76.0
ATR0564G046 Amborella trichopoda HOM05D003845 ORTHO05D004161 5.3e-22 109.4 79 67.1
CAN.G178.11 Capsicum annuum HOM05D007284 ORTHO05D009303 7.0e-22 109.0 79 72.2
Psat3g206280 Pisum sativum HOM05D003845 ORTHO05D004161 1.0e-20 105.1 68 75.0
RcHm_v2.0_Chr2g0123031 Rosa chinensis HOM05D003845 ORTHO05D004161 1.2e-18 98.2 70 72.9
SEGI_31548 Sequoiadendron giganteum HOM05D003845 ORTHO05D004161 8.0e-18 95.5 71 60.6
CDE02G0049 Ceratophyllum demersum HOM05D003845 ORTHO05D004161 1.5e-16 91.3 124 46.8
Hund04285 Selenicereus undatus HOM05D003845 ORTHO05D004161 3.5e-13 80.1 58 70.7


User provided reference genes

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