Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_14130 Corylus avellana HOM05D006042 ORTHO05D007658 3.8e-91 338.2 174 100.0
Cfa007944 Carpinus fangiana HOM05D006042 ORTHO05D007658 5.9e-36 154.8 130 66.9
GSVIVG01036442001 Vitis vinifera HOM05D006042 ORTHO05D007658 6.8e-32 141.4 119 66.4
Ciclev10012434m.g Citrus clementina HOM05D006042 ORTHO05D007658 1.2e-31 140.6 130 61.5
Thecc.04G137400 Theobroma cacao HOM05D006042 ORTHO05D007658 1.2e-31 140.6 104 72.1
CiPaw.03G059800 Carya illinoinensis HOM05D006042 ORTHO05D007658 1.5e-31 140.2 130 62.3
Manes.02G066700 Manihot esculenta HOM05D006042 ORTHO05D007658 2.0e-31 139.8 77 88.3
CSS0008868 Camellia sinensis var. sinensis HOM05D006042 ORTHO05D007658 2.6e-31 139.4 78 88.5
Cpa.g.sc179.22 Carica papaya HOM05D006042 ORTHO05D007658 5.7e-31 138.3 96 71.9
Duzib138G1312 Durio zibethinus HOM05D006042 ORTHO05D007658 5.7e-31 138.3 104 71.2
Hma1.2p1_0550F.1_g177265 Hydrangea macrophylla HOM05D006042 ORTHO05D007658 5.7e-31 138.3 132 59.8
Gohir.A11G162500 Gossypium hirsutum HOM05D006042 ORTHO05D007658 7.5e-31 137.9 96 75.0
Gorai.007G180300 Gossypium raimondii HOM05D006042 ORTHO05D007658 7.5e-31 137.9 96 75.0
Gohir.D11G168732 Gossypium hirsutum HOM05D006042 ORTHO05D007658 9.8e-31 137.5 96 74.0
arahy.Tifrunner.gnm1.ann1.TWH6SW Arachis hypogaea HOM05D006042 ORTHO05D007658 1.3e-30 137.1 130 62.3
CANSAT64G1085 Cannabis sativa HOM05D006042 ORTHO05D007658 1.7e-30 136.7 121 62.8
Nitab4.5_0002489g0020 Nicotiana tabacum HOM05D006042 ORTHO05D007658 1.7e-30 136.7 96 74.0
Glyma.19G045600 Glycine max HOM05D006042 ORTHO05D007658 2.2e-30 136.3 104 70.2
Nitab4.5_0004721g0010 Nicotiana tabacum HOM05D006042 ORTHO05D007658 2.2e-30 136.3 96 72.9
Cc07_g09000 Coffea canephora HOM05D006042 ORTHO05D007658 2.8e-30 136.0 78 87.2
QL02p052540 Quercus lobata HOM05D006042 ORTHO05D007658 2.8e-30 136.0 132 60.6
Ca_30067_v3 Cicer arietinum L. HOM05D006042 ORTHO05D007658 3.7e-30 135.6 78 84.6
Lj2g0022623 Lotus japonicus HOM05D006042 ORTHO05D007658 3.7e-30 135.6 104 71.2
Phvul.004G063000 Phaseolus vulgaris HOM05D006042 ORTHO05D007658 3.7e-30 135.6 102 71.6
AUR62014538 Chenopodium quinoa HOM05D006042 ORTHO05D007658 4.8e-30 135.2 104 71.2
Actinidia26288 Actinidia chinensis HOM05D006042 ORTHO05D007658 6.3e-30 134.8 78 85.9
ClCG11G005350 Citrullus lanatus HOM05D006042 ORTHO05D007658 1.1e-29 134.0 96 74.0
Eucgr.F02481 Eucalyptus grandis HOM05D006042 ORTHO05D007658 1.1e-29 134.0 78 84.6
Atru.chr8.825 Acer truncatum HOM05D006042 ORTHO05D007658 1.4e-29 133.7 78 83.3
CsaV3_5G039130 Cucumis sativus L. HOM05D006042 ORTHO05D007658 1.4e-29 133.7 96 74.0
Potri.004G102100 Populus trichocarpa HOM05D006042 ORTHO05D007658 1.4e-29 133.7 129 58.9
CDE09G0042 Ceratophyllum demersum HOM05D006042 ORTHO05D007658 2.4e-29 132.9 130 55.4
VMungo0464G1707 Vigna mungo HOM05D006042 ORTHO05D007658 4.1e-29 132.1 104 66.3
Oeu030760.1 Olea europaea HOM05D006042 ORTHO05D007658 5.4e-29 131.7 77 87.0
Potri.017G112700 Populus trichocarpa HOM05D006042 ORTHO05D007658 5.4e-29 131.7 129 58.1
Solyc03g034170.4 Solanum lycopersicum HOM05D006042 ORTHO05D007658 5.4e-29 131.7 96 71.9
Sopen03g006950 Solanum pennellii HOM05D006042 ORTHO05D007658 5.4e-29 131.7 96 71.9
FvH4_6g45340 Fragaria vesca HOM05D006042 ORTHO05D007658 9.1e-29 131.0 78 80.8
FAN14G4491 Fragaria x ananassa HOM05D006042 ORTHO05D007658 9.1e-29 131.0 78 80.8
AUR62008965 Chenopodium quinoa HOM05D006042 ORTHO05D007658 1.2e-28 130.6 104 69.2
PGSC0003DMG400019582 Solanum tuberosum HOM05D006042 ORTHO05D007658 1.6e-28 130.2 96 70.8
Psat1g013000 Pisum sativum HOM05D006042 ORTHO05D007658 2.7e-28 129.4 77 83.1
TPR.G32447 Trifolium pratense HOM05D006042 ORTHO05D007658 2.7e-28 129.4 77 83.1
TWI53G1226 Tripterygium wilfordii HOM05D006042 ORTHO05D007658 2.7e-28 129.4 132 57.6
THA.LOC104805550 Tarenaya hassleriana HOM05D006042 ORTHO05D007658 3.5e-28 129.0 95 68.4
AL7G51880 Arabidopsis lyrata HOM05D006042 ORTHO05D007658 4.5e-28 128.6 76 80.3
CAN.G995.2 Capsicum annuum HOM05D006042 ORTHO05D007658 4.5e-28 128.6 96 70.8
MBI09_g41181_MAGBIO Magnolia biondii HOM05D006042 ORTHO05D007658 4.5e-28 128.6 88 72.7
ECA232G3341 Erigeron canadensis HOM05D006042 ORTHO05D007658 5.9e-28 128.3 96 67.7
Medtr6g017260 Medicago truncatula HOM05D006042 ORTHO05D007658 5.9e-28 128.3 77 80.5
Os08g0359000 Oryza sativa ssp. japonica HOM05D006042 ORTHO05D007658 5.9e-28 128.3 96 69.8
PGR004G1523 Punica granatum HOM05D006042 ORTHO05D007658 5.9e-28 128.3 104 66.3
Carub.0007s3720 Capsella rubella HOM05D006042 ORTHO05D007658 7.7e-28 127.9 76 78.9
Thhalv10027870m.g Eutrema salsugineum HOM05D006042 ORTHO05D007658 7.7e-28 127.9 76 78.9
FAN09G0627 Fragaria x ananassa HOM05D006042 ORTHO05D007658 7.7e-28 127.9 78 79.5
SalBow3G2575 Salvia bowleyana HOM05D006042 ORTHO05D007658 1.0e-27 127.5 78 78.2
SalBow3G3727 Salvia bowleyana HOM05D006042 ORTHO05D007658 1.0e-27 127.5 78 78.2
CARHR214100 Cardamine hirsuta HOM05D006042 ORTHO05D007658 1.3e-27 127.1 76 77.6
Sabra04G0078300 Salix brachista HOM05D006042 ORTHO05D007658 1.3e-27 127.1 95 68.4
BcaB02g07998 Brassica carinata HOM05D006042 ORTHO05D007658 1.7e-27 126.7 76 78.9
RcHm_v2.0_Chr2g0163121 Rosa chinensis HOM05D006042 ORTHO05D007658 2.3e-27 126.3 78 78.2
ATR0589G121 Amborella trichopoda HOM05D006042 ORTHO05D007658 2.9e-27 125.9 132 55.3
BcaC08g44400 Brassica carinata HOM05D006042 ORTHO05D007658 2.9e-27 125.9 76 77.6
A07p19810 Brassica napus HOM05D006042 ORTHO05D007658 2.9e-27 125.9 76 77.6
C06p18330 Brassica napus HOM05D006042 ORTHO05D007658 2.9e-27 125.9 76 77.6
BolC6t37045H Brassica oleracea HOM05D006042 ORTHO05D007658 2.9e-27 125.9 76 77.6
BraA07t29682Z Brassica rapa HOM05D006042 ORTHO05D007658 2.9e-27 125.9 76 77.6
FAN05G0122 Fragaria x ananassa HOM05D006042 ORTHO05D007658 2.9e-27 125.9 78 78.2
HanXRQChr14g0438681 Helianthus annuus HOM05D006042 ORTHO05D007658 2.9e-27 125.9 96 65.6
Lalb_Chr06g0174661 Lupinus albus HOM05D006042 ORTHO05D007658 2.9e-27 125.9 78 79.5
MD17G1074400 Malus domestica HOM05D006042 ORTHO05D007658 2.9e-27 125.9 78 82.1
MSTRG.2747 Avicennia marina HOM05D006042 ORTHO05D007658 3.8e-27 125.6 78 76.9
MD09G1084900 Malus domestica HOM05D006042 ORTHO05D007658 5.0e-27 125.2 78 80.8
Lsat_1_v5_gn_4_153081 Lactuca sativa HOM05D006042 ORTHO05D007658 6.5e-27 124.8 77 75.3
Prupe.3G239600 Prunus persica HOM05D006042 ORTHO05D007658 1.1e-26 124.0 78 80.8
Sp1g29720 Schrenkiella parvula HOM05D006042 ORTHO05D007658 1.1e-26 124.0 76 76.3
Lj2C447G3 Lonicera japonica HOM05D006042 ORTHO05D007658 1.5e-26 123.6 99 67.7
Hund16127 Selenicereus undatus HOM05D006042 ORTHO05D007658 1.5e-26 123.6 99 65.7
Aqoxy3G03922 Aquilegia oxysepala HOM05D006042 ORTHO05D007658 2.5e-26 122.9 132 55.3
Sc10g0001330 Simmondsia chinensis HOM05D006042 ORTHO05D007658 2.5e-26 122.9 89 71.9
Aa31LG9G16960 Aethionema arabicum HOM05D006042 ORTHO05D007658 5.5e-26 121.7 76 76.3
Zm00001eb042940 Zea mays HOM05D006042 ORTHO05D007658 7.2e-26 121.3 98 67.3
DCAR_009854 Daucus carota HOM05D006042 ORTHO05D007658 2.1e-25 119.8 114 59.6
COL.COLO4_16190 Corchorus olitorius HOM05D002377 ORTHO05D007658 8.0e-25 117.9 115 60.0
Migut.H00201 Erythranthe guttata HOM05D006042 ORTHO05D007658 8.0e-25 117.9 130 53.1
vmacro18106 Vaccinium macrocarpon HOM05D006042 ORTHO05D007658 8.0e-25 117.9 63 85.7
PSO063G0034 Papaver somniferum HOM05D006042 ORTHO05D007658 1.0e-24 117.5 78 74.4
PSO782G1563 Papaver somniferum HOM05D006042 ORTHO05D007658 1.4e-24 117.1 78 74.4
HPP92_008047 Vanilla planifolia HOM05D006042 ORTHO05D007658 4.0e-24 115.5 69 75.4
SEGI_07967 Sequoiadendron giganteum HOM05D006042 ORTHO05D007658 1.2e-23 114.0 102 60.8
Sed0018352 Sechium edule HOM05D006042 ORTHO05D007658 7.5e-23 111.3 81 71.6
AT5G38660 Arabidopsis thaliana HOM05D006042 ORTHO05D007658 1.1e-21 107.5 60 83.3
FAN02G0945 Fragaria x ananassa HOM05D006042 ORTHO05D007658 7.8e-20 101.3 78 70.5
Pp3c4_3720 Physcomitrium patens HOM05D006042 ORTHO05D007658 8.6e-19 97.8 76 64.5
SMO232G0004 Selaginella moellendorffii HOM05D006042 ORTHO05D007658 8.6e-19 97.8 107 52.3
Ah.16g101960 Amaranthus hybridus HOM05D000095 ORTHO05D000330 1.1e-18 97.4 54 85.2
Mapoly0019s0052 Marchantia polymorpha HOM05D006042 ORTHO05D007658 1.1e-18 97.4 89 53.9
AagrBONN_evm.TU.Sc2ySwM_340.223 Anthoceros agrestis HOM05D000513 ORTHO05D003825 5.6e-18 95.1 72 61.1
QL02p057613 Quercus lobata HOM05D006042 ORTHO05D007658 7.3e-18 94.7 66 71.2
Rhsim08G0079500 Rhododendron simsii HOM05D006042 ORTHO05D007658 7.3e-18 94.7 106 51.9
GSVIVG01026074001 Vitis vinifera HOM05D006042 ORTHO05D007658 3.0e-16 89.4 44 95.5
arahy.Tifrunner.gnm1.ann1.4I03R9 Arachis hypogaea HOM05D006042 ORTHO05D007658 1.5e-15 87.0 105 50.5
Ca_26178_v3 Cicer arietinum L. HOM05D006042 ORTHO05D007658 2.0e-15 86.7 46 87.0
MELO3C022088.2 Cucumis melo HOM05D006042 ORTHO05D007658 5.8e-15 85.1 48 81.2
SGA_v2.0_scaffold49G18090 Striga asiatica HOM05D006042 ORTHO05D007658 7.5e-15 84.7 100 53.0
EL10Ac2g04605 Beta vulgaris HOM05D006042 ORTHO05D007658 1.7e-14 83.6 74 62.2
CBR_g44937 Chara braunii HOM05D006042 ORTHO05D007658 2.2e-14 83.2 77 49.4
Peaxi162Scf00104g00074 Petunia axillaris HOM05D006042 ORTHO05D007658 1.8e-13 80.1 46 80.4
Peaxi162Scf00751g00624 Petunia axillaris HOM05D006042 ORTHO05D007658 1.0e-11 74.3 59 64.4
Nn3g17761 Nelumbo nucifera HOM05D006042 ORTHO05D007658 3.9e-11 72.4 130 41.5
C04p45290 Brassica napus HOM05D006042 ORTHO05D007658 2.8e-09 66.2 129 35.7
Cpa.g.sc179.24 Carica papaya HOM05D006042 ORTHO05D007658 4.9e-06 55.5 33 75.8


User provided reference genes

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