Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_14128 Corylus avellana HOM05D007356 ORTHO05D009247 3.2e-287 991.1 514 100.0
Cfa007946 Carpinus fangiana HOM05D007356 ORTHO05D009247 7.9e-254 880.2 502 92.6
QL02p052579 Quercus lobata HOM05D007356 ORTHO05D009247 1.8e-165 586.6 569 61.3
Prupe.3G239800 Prunus persica HOM05D007356 ORTHO05D009247 3.8e-147 525.8 480 63.1
MD09G1084700 Malus domestica HOM05D007356 ORTHO05D009247 2.2e-139 500.0 481 61.3
Atru.chr8.830 Acer truncatum HOM05D007356 ORTHO05D009247 1.4e-138 497.3 470 59.1
CANSAT64G1351 Cannabis sativa HOM05D007356 ORTHO05D009247 5.4e-138 495.4 481 59.5
MD17G1074100 Malus domestica HOM05D007356 ORTHO05D009247 2.8e-134 483.0 505 57.2
Cpa.g.sc179.26 Carica papaya HOM05D007356 ORTHO05D009247 9.0e-133 478.0 513 55.0
Potri.017G112500 Populus trichocarpa HOM05D007356 ORTHO05D009247 9.0e-133 478.0 469 57.6
ClCG05G012060 Citrullus lanatus HOM05D007356 ORTHO05D009247 6.5e-131 471.9 487 57.9
CsaV3_3G020350 Cucumis sativus L. HOM05D007356 ORTHO05D009247 7.1e-130 468.4 486 57.4
Dinv34849 Davidia involucrata HOM05D007356 ORTHO05D009247 1.5e-127 460.7 436 59.9
Ciclev10011716m.g Citrus clementina HOM05D007356 ORTHO05D009247 5.7e-127 458.8 473 55.2
FvH4_6g45360 Fragaria vesca HOM05D007356 ORTHO05D009247 5.8e-124 448.7 474 57.6
FAN14G2396 Fragaria x ananassa HOM05D007356 ORTHO05D009247 1.7e-123 447.2 471 57.5
Rhsim10G0063400 Rhododendron simsii HOM05D007356 ORTHO05D009247 3.8e-123 446.0 476 57.1
arahy.Tifrunner.gnm1.ann1.3VIJ8X Arachis hypogaea HOM05D007356 ORTHO05D009247 1.9e-122 443.7 487 52.2
Hma1.2p1_0136F.1_g062070 Hydrangea macrophylla HOM05D007356 ORTHO05D009247 1.2e-121 441.0 475 54.5
arahy.Tifrunner.gnm1.ann1.33CL05 Arachis hypogaea HOM05D007356 ORTHO05D009247 2.1e-121 440.3 481 52.4
Thecc.04G137600 Theobroma cacao HOM05D007356 ORTHO05D009247 2.1e-121 440.3 485 53.6
Manes.01G108100 Manihot esculenta HOM05D007356 ORTHO05D009247 1.0e-120 438.0 471 55.4
Lj2g0005002 Lotus japonicus HOM05D007356 ORTHO05D009247 6.3e-118 428.7 473 52.6
Duzib133G0592 Durio zibethinus HOM05D007356 ORTHO05D009247 2.6e-116 423.3 477 53.9
vmacro05573 Vaccinium macrocarpon HOM05D007356 ORTHO05D009247 7.7e-116 421.8 519 49.5
Sabra17G0093200 Salix brachista HOM05D007356 ORTHO05D009247 3.8e-115 419.5 489 51.9
Gorai.007G180100 Gossypium raimondii HOM05D007356 ORTHO05D009247 6.7e-112 408.7 506 50.0
COL.COLO4_16192 Corchorus olitorius HOM05D007356 ORTHO05D009247 8.8e-112 408.3 510 51.8
THA.LOC104820954 Tarenaya hassleriana HOM05D007356 ORTHO05D009247 8.8e-112 408.3 480 48.3
Gohir.A11G162300 Gossypium hirsutum HOM05D007356 ORTHO05D009247 9.7e-111 404.8 474 51.1
Gohir.D11G168600 Gossypium hirsutum HOM05D007356 ORTHO05D009247 2.4e-109 400.2 477 50.7
TWI31G0521 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 1.0e-107 394.8 476 50.0
TAR374G1737 Trochodendron aralioides HOM05D007356 ORTHO05D009247 1.4e-106 391.0 498 51.2
TPR.G32461 Trifolium pratense HOM05D007356 ORTHO05D009247 3.6e-105 386.3 483 49.3
Potri.004G102400 Populus trichocarpa HOM05D007356 ORTHO05D009247 4.7e-105 386.0 400 57.5
Aa31LG5G12990 Aethionema arabicum HOM05D007356 ORTHO05D009247 9.1e-101 371.7 494 46.2
Nn4g23745 Nelumbo nucifera HOM05D007356 ORTHO05D009247 9.1e-101 371.7 497 49.7
Glyma.13G047100 Glycine max HOM05D007356 ORTHO05D009247 1.5e-100 370.9 481 47.6
Actinidia18124 Actinidia chinensis HOM05D007356 ORTHO05D009247 2.6e-100 370.2 407 55.5
Aqoxy3G03920 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 2.6e-100 370.2 485 47.4
Nitab4.5_0008781g0020 Nicotiana tabacum HOM05D007356 ORTHO05D009247 2.6e-100 370.2 480 48.5
CSS0016710 Camellia sinensis var. sinensis HOM05D007356 ORTHO05D009247 5.9e-100 369.0 409 56.0
SGA_v2.0_scaffold33G13428 Striga asiatica HOM05D007356 ORTHO05D009247 7.7e-100 368.6 499 48.5
TWI79G1397 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 2.2e-99 367.1 435 51.0
Medtr6g017235 Medicago truncatula HOM05D007356 ORTHO05D009247 1.5e-98 364.4 483 47.2
Lalb_Chr06g0174681 Lupinus albus HOM05D007356 ORTHO05D009247 4.2e-98 362.8 474 48.5
VMungo0464G1268 Vigna mungo HOM05D007356 ORTHO05D009247 1.6e-97 360.9 486 47.1
Oeu030757.2 Olea europaea HOM05D007356 ORTHO05D009247 4.7e-97 359.4 445 51.2
PGSC0003DMG400012678 Solanum tuberosum HOM05D007356 ORTHO05D009247 1.4e-96 357.8 474 48.3
Lsat_1_v5_gn_4_153101 Lactuca sativa HOM05D007356 ORTHO05D009247 5.2e-96 355.9 483 48.7
Peaxi162Scf01327g00135 Petunia axillaris HOM05D007356 ORTHO05D009247 8.8e-96 355.1 507 45.6
Phvul.004G062800 Phaseolus vulgaris HOM05D007356 ORTHO05D009247 2.0e-95 354.0 475 47.6
Hund13734 Selenicereus undatus HOM05D007356 ORTHO05D009247 5.7e-95 352.4 505 45.7
AL3G11850 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 7.5e-95 352.1 490 45.5
Sopen02g030430 Solanum pennellii HOM05D007356 ORTHO05D009247 2.2e-94 350.5 475 47.4
Nitab4.5_0004118g0090 Nicotiana tabacum HOM05D007356 ORTHO05D009247 3.1e-93 346.7 451 49.2
Solyc02g085740.4 Solanum lycopersicum HOM05D007356 ORTHO05D009247 3.1e-93 346.7 480 47.1
Ah.16g101940 Amaranthus hybridus HOM05D007356 ORTHO05D009247 5.3e-93 345.9 516 43.6
Cc07_g09030 Coffea canephora HOM05D007356 ORTHO05D009247 5.3e-93 345.9 490 46.7
HanXRQChr14g0438671 Helianthus annuus HOM05D007356 ORTHO05D009247 2.6e-92 343.6 479 48.4
CARHR076490 Cardamine hirsuta HOM05D007356 ORTHO05D009247 4.5e-92 342.8 489 45.0
Migut.H00199 Erythranthe guttata HOM05D007356 ORTHO05D009247 2.2e-91 340.5 470 47.0
MBI16_g25107_MAGBIO Magnolia biondii HOM05D007356 ORTHO05D009247 2.2e-86 323.9 494 45.1
PSO063G7355 Papaver somniferum HOM05D007356 ORTHO05D009247 4.8e-86 322.8 500 43.8
AUR62014539 Chenopodium quinoa HOM05D007356 ORTHO05D009247 7.0e-85 318.9 467 45.0
EL10Ac2g04607 Beta vulgaris HOM05D007356 ORTHO05D009247 1.6e-84 317.8 593 39.0
Eucgr.J01469 Eucalyptus grandis HOM05D007356 ORTHO05D009247 2.5e-82 310.5 391 46.0
CiPaw.03G059600 Carya illinoinensis HOM05D007356 ORTHO05D009247 3.7e-78 296.6 281 60.5
DCAR_017218 Daucus carota HOM05D007356 ORTHO05D009247 2.4e-77 293.9 444 45.5
RcHm_v2.0_Chr2g0163141 Rosa chinensis HOM05D007356 ORTHO05D009247 4.5e-76 289.7 315 55.9
Psat1g012920 Pisum sativum HOM05D007356 ORTHO05D009247 3.3e-74 283.5 337 49.3
FAN09G4466 Fragaria x ananassa HOM05D007356 ORTHO05D009247 3.0e-72 276.9 315 52.7
PGR042G1693 Punica granatum HOM05D007356 ORTHO05D009247 1.2e-71 275.0 478 41.6
Sed0002469 Sechium edule HOM05D007356 ORTHO05D009247 3.4e-71 273.5 316 55.4
ECA232G5000 Erigeron canadensis HOM05D007356 ORTHO05D009247 2.2e-70 270.8 349 48.4
PSO782G4491 Papaver somniferum HOM05D007356 ORTHO05D009247 1.8e-69 267.7 436 44.3
AUR62008964 Chenopodium quinoa HOM05D007356 ORTHO05D009247 4.3e-66 256.5 372 43.3
MELO3C023764.2 Cucumis melo HOM05D007356 ORTHO05D009247 5.6e-66 256.1 293 53.9
unitig_60.g25515 Utricularia gibba HOM05D007356 ORTHO05D009247 3.4e-63 246.9 469 37.3
Ca_26179_v3 Cicer arietinum L. HOM05D007356 ORTHO05D009247 1.7e-62 244.6 288 49.0
CDE08G0776 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 3.5e-60 236.9 494 35.8
ATR0681G386 Amborella trichopoda HOM05D007356 ORTHO05D009247 2.1e-52 211.1 551 34.1
GSVIVG01036444001 Vitis vinifera HOM05D007356 ORTHO05D009247 2.1e-52 211.1 186 60.2
Sc11g0008200 Simmondsia chinensis HOM05D007356 ORTHO05D009247 6.0e-52 209.5 329 43.8
CDE02G0316 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 6.8e-48 196.1 435 36.1
AL3G11840 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 1.2e-47 195.3 200 54.5
Lj2A447T55 Lonicera japonica HOM05D007356 ORTHO05D009247 2.2e-46 191.0 170 58.8
Os01g0694200 Oryza sativa ssp. japonica HOM05D007356 ORTHO05D009247 1.2e-41 175.3 476 32.8
Sed0015927 Sechium edule HOM05D007356 ORTHO05D009247 1.2e-41 175.3 173 57.2
Glyma.19G045202 Glycine max HOM05D007356 ORTHO05D009247 3.0e-35 154.1 204 46.1
Zm00001eb155990 Zea mays HOM05D007356 ORTHO05D009247 5.1e-35 153.3 489 31.5
Aqoxy3G02147 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 1.3e-33 148.7 131 55.7
Sc11g0008210 Simmondsia chinensis HOM05D007356 ORTHO05D009247 1.5e-26 125.2 148 47.3
Lsat_1_v5_gn_3_87441 Lactuca sativa HOM05D007356 ORTHO05D009247 2.1e-20 104.8 117 49.6
Lj2C447T11 Lonicera japonica HOM05D007356 ORTHO05D009247 1.4e-16 92.0 122 47.5
SMO145G0090 Selaginella moellendorffii HOM05D007356 ORTHO05D009247 3.1e-16 90.9 448 25.7
SEGI_12886 Sequoiadendron giganteum HOM05D007356 ORTHO05D009247 6.9e-16 89.7 198 30.8
AUR62035477 Chenopodium quinoa HOM05D000128 ORTHO05D000059 1.7e-14 85.1 85 44.7
Pp3c9_14770 Physcomitrium patens HOM05D007356 ORTHO05D009247 7.9e-12 76.3 168 34.5
Actinidia15867 Actinidia chinensis HOM05D007356 ORTHO05D009247 9.6e-10 69.3 60 58.3
AagrBONN_evm.TU.Sc2ySwM_344.3211 Anthoceros agrestis HOM05D007356 ORTHO05D009247 1.3e-09 68.9 194 26.8
Mapoly0080s0048 Marchantia polymorpha HOM05D007356 ORTHO05D009247 2.8e-09 67.8 212 26.9
Pp3c15_5150 Physcomitrium patens HOM05D007356 ORTHO05D009247 4.1e-08 63.9 104 36.5
CBR_g44341 Chara braunii HOM05D007356 ORTHO05D009247 2.6e-07 61.2 101 35.6


User provided reference genes

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