Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_14080 Corylus avellana HOM05D007016 ORTHO05D008847 1.4e-142 509.6 256 100.0
Cfa011932 Carpinus fangiana HOM05D007016 ORTHO05D008847 1.7e-127 459.5 253 92.5
Haze_09164 Corylus avellana HOM05D007016 ORTHO05D008847 5.2e-113 411.4 256 84.0
Haze_09158 Corylus avellana HOM05D007016 ORTHO05D008847 1.9e-107 392.9 256 82.4
CiPaw.12G078100 Carya illinoinensis HOM05D007016 ORTHO05D008847 1.7e-95 353.2 259 74.1
QL02p028324 Quercus lobata HOM05D007016 ORTHO05D008847 2.2e-79 299.7 217 70.5
Dinv12013 Davidia involucrata HOM05D007016 ORTHO05D008847 2.9e-79 299.3 240 66.7
Prupe.5G128800 Prunus persica HOM05D007016 ORTHO05D008847 2.9e-79 299.3 238 67.2
Dinv34693 Davidia involucrata HOM05D007016 ORTHO05D008847 6.4e-79 298.1 240 66.2
MD14G1125100 Malus domestica HOM05D007016 ORTHO05D008847 4.6e-77 292.0 253 60.1
GSVIVG01019642001 Vitis vinifera HOM05D007016 ORTHO05D008847 2.3e-76 289.7 250 61.6
Thecc.03G221900 Theobroma cacao HOM05D007016 ORTHO05D008847 1.5e-75 287.0 234 64.1
Duzib205G1809 Durio zibethinus HOM05D007016 ORTHO05D008847 9.5e-75 284.3 240 62.5
Actinidia22202 Actinidia chinensis HOM05D007016 ORTHO05D008847 1.2e-74 283.9 250 61.6
PGR031G1249 Punica granatum HOM05D007016 ORTHO05D008847 1.6e-74 283.5 254 62.2
Duzib084G0025 Durio zibethinus HOM05D000458 ORTHO05D000951 6.2e-74 281.6 221 64.7
Eucgr.D01686 Eucalyptus grandis HOM05D007016 ORTHO05D008847 1.2e-72 277.3 248 61.3
FAN04G1313 Fragaria x ananassa HOM05D007016 ORTHO05D008847 2.0e-72 276.6 227 62.6
Rhsim02G0251600 Rhododendron simsii HOM05D007016 ORTHO05D008847 2.6e-72 276.2 248 62.1
FAN08G2008 Fragaria x ananassa HOM05D007016 ORTHO05D008847 1.7e-71 273.5 250 58.0
vmacro11507 Vaccinium macrocarpon HOM05D007016 ORTHO05D008847 1.7e-71 273.5 239 59.8
COL.COLO4_10789 Corchorus olitorius HOM05D000458 ORTHO05D000951 2.2e-71 273.1 216 65.3
TWI15G0571 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 2.9e-71 272.7 240 61.2
MD06G1117700 Malus domestica HOM05D007016 ORTHO05D008847 1.1e-70 270.8 221 63.8
FvH4_5g11000 Fragaria vesca HOM05D007016 ORTHO05D008847 9.2e-70 267.7 227 60.8
Manes.02G003500 Manihot esculenta HOM05D007016 ORTHO05D008847 9.2e-70 267.7 240 61.2
Gorai.003G076500 Gossypium raimondii HOM05D007016 ORTHO05D008847 6.0e-69 265.0 227 59.5
TWI81G0911 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 1.7e-68 263.5 240 61.2
Ciclev10021806m.g Citrus clementina HOM05D007016 ORTHO05D008847 8.6e-68 261.2 240 58.3
Nitab4.5_0004251g0050 Nicotiana tabacum HOM05D007016 ORTHO05D008847 1.5e-67 260.4 232 60.8
TAR375G0929 Trochodendron aralioides HOM05D007016 ORTHO05D008847 3.3e-67 259.2 257 57.6
ClCG01G001570 Citrullus lanatus HOM05D007016 ORTHO05D008847 4.3e-67 258.8 263 55.9
RcHm_v2.0_Chr7g0186811 Rosa chinensis HOM05D007016 ORTHO05D008847 4.3e-67 258.8 227 59.5
Sed0027229 Sechium edule HOM05D007016 ORTHO05D008847 5.6e-67 258.5 255 54.1
Glyma.01G230300 Glycine max HOM05D007016 ORTHO05D008847 1.6e-66 256.9 206 64.6
Oeu022037.1 Olea europaea HOM05D007016 ORTHO05D008847 1.4e-65 253.8 247 56.7
Sabra03G0106200 Salix brachista HOM05D007016 ORTHO05D008847 1.4e-65 253.8 255 56.5
Potri.003G146100 Populus trichocarpa HOM05D007016 ORTHO05D008847 1.8e-65 253.4 255 56.1
Peaxi162Scf00074g00350 Petunia axillaris HOM05D000458 ORTHO05D000951 6.8e-65 251.5 231 57.6
CsaV3_5G001730 Cucumis sativus L. HOM05D007016 ORTHO05D008847 8.9e-65 251.1 233 58.4
FAN18G1330 Fragaria x ananassa HOM05D007016 ORTHO05D008847 4.4e-64 248.8 265 52.1
arahy.Tifrunner.gnm1.ann1.CXQL6Y Arachis hypogaea HOM05D007016 ORTHO05D008847 5.8e-64 248.4 255 56.9
arahy.Tifrunner.gnm1.ann1.6JL1AX Arachis hypogaea HOM05D007016 ORTHO05D008847 1.1e-62 244.2 255 55.7
Phvul.002G036800 Phaseolus vulgaris HOM05D007016 ORTHO05D008847 3.2e-62 242.7 210 60.5
Atru.chr9.1899 Acer truncatum HOM05D007016 ORTHO05D008847 7.1e-62 241.5 204 61.8
Sc01g0010620 Simmondsia chinensis HOM05D007016 ORTHO05D008847 1.6e-61 240.4 246 54.9
VMungo1215G3083 Vigna mungo HOM05D007016 ORTHO05D008847 1.3e-60 237.3 211 60.2
Migut.O00796 Erythranthe guttata HOM05D007016 ORTHO05D008847 2.3e-60 236.5 254 55.5
Nitab4.5_0007063g0030 Nicotiana tabacum HOM05D007016 ORTHO05D008847 2.3e-60 236.5 282 51.4
MBI04_g33411_MAGBIO Magnolia biondii HOM05D007016 ORTHO05D008847 3.0e-60 236.1 238 54.6
AUR62007045 Chenopodium quinoa HOM05D007016 ORTHO05D008847 3.9e-60 235.7 257 52.1
HanXRQChr06g0166831 Helianthus annuus HOM05D007016 ORTHO05D008847 8.6e-60 234.6 222 56.3
Gohir.A02G097900 Gossypium hirsutum HOM05D007016 ORTHO05D008847 1.1e-59 234.2 234 53.8
Cc08_g16690 Coffea canephora HOM05D007016 ORTHO05D008847 2.5e-59 233.0 235 54.5
FAN13G1076 Fragaria x ananassa HOM05D007016 ORTHO05D008847 5.6e-59 231.9 220 57.3
Ca_24467_v3 Cicer arietinum L. HOM05D007016 ORTHO05D008847 7.3e-59 231.5 201 62.2
MELO3C005780.2 Cucumis melo HOM05D007016 ORTHO05D008847 6.2e-58 228.4 254 53.1
DCAR_006538 Daucus carota HOM05D007016 ORTHO05D008847 4.0e-57 225.7 207 59.9
Gohir.D03G085700 Gossypium hirsutum HOM05D007016 ORTHO05D008847 4.0e-57 225.7 227 53.3
ECA246G5308 Erigeron canadensis HOM05D007016 ORTHO05D008847 5.2e-57 225.3 216 53.7
Aqoxy5G04260 Aquilegia oxysepala HOM05D007016 ORTHO05D008847 3.4e-56 222.6 243 51.4
LjContig00222g0018079 Lotus japonicus HOM05D007016 ORTHO05D008847 5.8e-56 221.9 232 54.7
Medtr5g008220 Medicago truncatula HOM05D007016 ORTHO05D008847 7.6e-56 221.5 236 53.4
Cpa.g.sc175.19 Carica papaya HOM05D007016 ORTHO05D008847 1.3e-55 220.7 184 63.0
Nn3g18888 Nelumbo nucifera HOM05D007016 ORTHO05D008847 1.1e-54 217.6 295 45.4
PSO339G2192 Papaver somniferum HOM05D007016 ORTHO05D008847 2.4e-54 216.5 239 52.7
PSO339G4063 Papaver somniferum HOM05D007016 ORTHO05D008847 2.4e-54 216.5 239 53.1
EL10Ac5g12439 Beta vulgaris HOM05D007016 ORTHO05D008847 4.2e-54 215.7 253 51.0
Lsat_1_v5_gn_3_13941 Lactuca sativa HOM05D007016 ORTHO05D008847 1.2e-53 214.2 230 52.6
SGA_v2.0_scaffold314G48366 Striga asiatica HOM05D007016 ORTHO05D008847 1.2e-53 214.2 203 55.7
Ah.07g197890 Amaranthus hybridus HOM05D007016 ORTHO05D008847 4.6e-53 212.2 255 51.8
ATR0620G109 Amborella trichopoda HOM05D007016 ORTHO05D008847 6.0e-53 211.8 203 52.2
PGSC0003DMG400012122 Solanum tuberosum HOM05D007016 ORTHO05D008847 1.0e-52 211.1 233 54.9
MSTRG.15575 Avicennia marina HOM05D007016 ORTHO05D008847 1.3e-52 210.7 248 51.2
Potri.001G084600 Populus trichocarpa HOM05D007016 ORTHO05D008847 3.0e-52 209.5 194 57.7
Lalb_Chr09g0320381 Lupinus albus HOM05D007016 ORTHO05D008847 1.2e-50 204.1 252 49.2
HPP92_022341 Vanilla planifolia HOM05D007016 ORTHO05D008847 2.1e-50 203.4 171 62.0
HPP92_022355 Vanilla planifolia HOM05D007016 ORTHO05D008847 2.1e-50 203.4 171 62.0
Solyc08g083030.4 Solanum lycopersicum HOM05D007016 ORTHO05D008847 6.2e-50 201.8 240 52.9
Sopen08g031240 Solanum pennellii HOM05D007016 ORTHO05D008847 1.4e-49 200.7 254 50.8
TPR.G38026 Trifolium pratense HOM05D007016 ORTHO05D008847 1.8e-49 200.3 174 59.2
Lsat_1_v5_gn_3_14061 Lactuca sativa HOM05D007016 ORTHO05D008847 6.9e-49 198.4 218 51.8
Zm00001eb428160 Zea mays HOM05D007016 ORTHO05D008847 2.6e-48 196.4 212 51.9
CAN.G567.80 Capsicum annuum HOM05D007016 ORTHO05D008847 4.4e-48 195.7 238 51.3
SEGI_36842 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 9.9e-48 194.5 238 44.1
Os04g0585600 Oryza sativa ssp. japonica HOM05D007016 ORTHO05D008847 8.4e-47 191.4 217 50.2
A07p21030 Brassica napus HOM05D003273 ORTHO05D004023 7.8e-45 184.9 178 54.5
HanXRQChr17g0534751 Helianthus annuus HOM05D007016 ORTHO05D008847 7.8e-45 184.9 183 53.6
Thhalv10027936m.g Eutrema salsugineum HOM05D007016 ORTHO05D008847 1.3e-44 184.1 185 53.0
BraA07t29790Z Brassica rapa HOM05D003273 ORTHO05D004023 3.9e-44 182.6 183 55.2
THA.LOC104809306 Tarenaya hassleriana HOM05D007016 ORTHO05D008847 3.9e-44 182.6 173 55.5
AL7G47260 Arabidopsis lyrata HOM05D007016 ORTHO05D008847 5.1e-44 182.2 201 50.7
Sp7g00170 Schrenkiella parvula HOM05D007016 ORTHO05D008847 1.9e-43 180.3 180 53.9
AT5G41960 Arabidopsis thaliana HOM05D007016 ORTHO05D008847 3.3e-43 179.5 196 51.5
A04p15110 Brassica napus HOM05D003273 ORTHO05D005100 3.3e-43 179.5 193 52.8
BcaC02g08900 Brassica carinata HOM05D003273 ORTHO05D004023 4.3e-43 179.1 198 53.0
BraA04t17152Z Brassica rapa HOM05D003273 ORTHO05D005100 4.3e-43 179.1 193 52.8
Carub.0007s3342 Capsella rubella HOM05D007016 ORTHO05D008847 4.3e-43 179.1 203 50.7
AUR62019909 Chenopodium quinoa HOM05D007016 ORTHO05D008847 7.3e-43 178.3 253 45.8
unitig_62.g23644 Utricularia gibba HOM05D007016 ORTHO05D008847 9.6e-43 177.9 194 49.0
C04p49340 Brassica napus HOM05D003273 ORTHO05D005100 1.6e-42 177.2 162 56.8
BolC4t26521H Brassica oleracea HOM05D003273 ORTHO05D004023 1.6e-42 177.2 162 56.8
BcaB06g27684 Brassica carinata HOM05D003273 ORTHO05D004023 2.1e-42 176.8 159 56.6
CARHR212600 Cardamine hirsuta HOM05D007016 ORTHO05D008847 4.8e-42 175.6 217 48.4
BcaC08g44572 Brassica carinata HOM05D003273 ORTHO05D004023 8.1e-42 174.9 185 54.1
C06p20380 Brassica napus HOM05D003273 ORTHO05D004023 9.0e-41 171.4 189 52.9
Aa31LG9G230 Aethionema arabicum HOM05D007016 ORTHO05D008847 7.6e-40 168.3 240 42.9
CDE07G1000 Ceratophyllum demersum HOM05D007016 ORTHO05D008847 3.9e-36 156.0 142 53.5
CSS0028177 Camellia sinensis var. sinensis HOM05D007016 ORTHO05D008847 1.5e-35 154.1 235 44.7
Mapoly0080s0071 Marchantia polymorpha HOM05D007016 ORTHO05D008847 4.3e-35 152.5 128 56.2
Pp3c14_22240 Physcomitrium patens HOM05D007016 ORTHO05D008847 3.7e-34 149.4 126 56.3
MD16G1274000 Malus domestica HOM05D007016 ORTHO05D008847 4.8e-34 149.1 166 49.4
Nitab4.5_0000051g0070 Nicotiana tabacum HOM05D007016 ORTHO05D008847 1.8e-33 147.1 154 53.2
AagrBONN_evm.TU.Sc2ySwM_117.1459 Anthoceros agrestis HOM05D007016 ORTHO05D008847 9.0e-33 144.8 134 52.2
SMO164G0130 Selaginella moellendorffii HOM05D007016 ORTHO05D008847 1.7e-31 140.6 122 51.6
BolC6t37216H Brassica oleracea HOM05D007016 ORTHO05D008847 9.3e-30 134.8 188 45.7
Psat2g187480 Pisum sativum HOM05D007016 ORTHO05D008847 3.5e-29 132.9 104 60.6
arahy.Tifrunner.gnm1.ann1.PIY4C5 Arachis hypogaea HOM05D007016 ORTHO05D008847 3.0e-28 129.8 86 70.9
CANSAT21G1603 Cannabis sativa HOM05D007016 ORTHO05D008847 2.4e-25 120.2 256 38.3
CBR_g26222 Chara braunii HOM05D007016 ORTHO05D008847 3.1e-25 119.8 138 47.1
SEGI_07436 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 4.0e-25 119.4 98 57.1
Hund14199 Selenicereus undatus HOM05D007016 ORTHO05D008847 5.3e-25 119.0 117 59.0
arahy.Tifrunner.gnm1.ann1.HM96ZH Arachis hypogaea HOM05D007016 ORTHO05D008847 3.0e-20 103.2 112 51.8


User provided reference genes

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