Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_13838 Corylus avellana HOM05D007220 ORTHO05D009058 9.7e-101 370.2 189 100.0
Cfa008220 Carpinus fangiana HOM05D007220 ORTHO05D009058 3.0e-94 348.6 189 94.7
CiPaw.04G061800 Carya illinoinensis HOM05D007220 ORTHO05D009058 2.1e-63 246.1 204 69.1
QL09p019051 Quercus lobata HOM05D007220 ORTHO05D009058 3.7e-60 235.3 200 66.5
ClCG05G007450 Citrullus lanatus HOM05D007220 ORTHO05D009058 2.7e-50 202.6 201 61.2
Dinv28549 Davidia involucrata HOM05D007220 ORTHO05D009058 2.7e-50 202.6 206 62.1
Manes.14G034000 Manihot esculenta HOM05D007220 ORTHO05D009058 2.7e-50 202.6 207 57.5
MD01G1184500 Malus domestica HOM05D007220 ORTHO05D009058 1.3e-49 200.3 189 60.3
MELO3C006826.2 Cucumis melo HOM05D007220 ORTHO05D009058 3.0e-49 199.1 201 60.7
CsaV3_3G016270 Cucumis sativus L. HOM05D007220 ORTHO05D009058 1.9e-48 196.4 201 61.2
GSVIVG01018558001 Vitis vinifera HOM05D007220 ORTHO05D009058 7.3e-48 194.5 180 62.2
Thecc.03G158900 Theobroma cacao HOM05D007220 ORTHO05D009058 1.1e-46 190.7 201 56.7
TWI39G1186 Tripterygium wilfordii HOM05D007220 ORTHO05D009058 4.9e-44 181.8 200 56.5
Duzib205G1715 Durio zibethinus HOM05D007220 ORTHO05D009058 1.9e-43 179.9 207 55.6
Eucgr.A02878 Eucalyptus grandis HOM05D007220 ORTHO05D009058 1.9e-43 179.9 182 58.2
COL.COLO4_14153 Corchorus olitorius HOM05D007220 ORTHO05D009058 2.4e-43 179.5 199 54.3
Cpa.g.sc3.292 Carica papaya HOM05D007220 ORTHO05D009058 3.2e-43 179.1 203 55.2
Dinv22967 Davidia involucrata HOM05D007220 ORTHO05D009058 2.1e-42 176.4 210 52.4
FvH4_7g27960 Fragaria vesca HOM05D007220 ORTHO05D009058 2.7e-42 176.0 181 59.1
FAN06G4318 Fragaria x ananassa HOM05D007220 ORTHO05D009058 6.0e-42 174.9 181 58.6
THA.LOC104811513 Tarenaya hassleriana HOM05D007220 ORTHO05D009058 7.8e-42 174.5 197 55.8
FAN10G3220 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.7e-41 173.3 181 56.9
Sabra15G0142900 Salix brachista HOM05D007220 ORTHO05D009058 3.0e-41 172.6 209 55.0
BcaC01g06128 Brassica carinata HOM05D007220 ORTHO05D009058 3.9e-41 172.2 190 55.8
C03p18980 Brassica napus HOM05D007220 ORTHO05D009058 3.9e-41 172.2 190 55.8
BolC3t14287H Brassica oleracea HOM05D007220 ORTHO05D009058 3.9e-41 172.2 190 55.8
FAN03G0488 Fragaria x ananassa HOM05D007220 ORTHO05D009058 5.1e-41 171.8 182 57.7
FAN03G2818 Fragaria x ananassa HOM05D007220 ORTHO05D009058 5.1e-41 171.8 182 57.7
FAN01G2832 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.1e-40 170.6 181 57.5
RcHm_v2.0_Chr1g0374911 Rosa chinensis HOM05D007220 ORTHO05D009058 1.1e-40 170.6 179 57.0
PGR042G1708 Punica granatum HOM05D007220 ORTHO05D009058 1.5e-40 170.2 202 53.5
Sc19g0001910 Simmondsia chinensis HOM05D007220 ORTHO05D009058 2.5e-40 169.5 190 56.8
BraA03t10902Z Brassica rapa HOM05D007220 ORTHO05D009058 5.6e-40 168.3 187 55.1
Cc02_g04040 Coffea canephora HOM05D007220 ORTHO05D009058 1.2e-39 167.2 213 52.1
FAN06G0674 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.6e-39 166.8 182 56.0
AL8G25850 Arabidopsis lyrata HOM05D007220 ORTHO05D009058 3.6e-39 165.6 196 51.5
Potri.015G129600 Populus trichocarpa HOM05D007220 ORTHO05D009058 3.6e-39 165.6 209 54.1
Glyma.09G232600 Glycine max HOM05D007220 ORTHO05D009058 8.1e-39 164.5 147 62.6
Nn4g26358 Nelumbo nucifera HOM05D007220 ORTHO05D009058 2.4e-38 162.9 204 49.0
MSTRG.27183 Avicennia marina HOM05D007220 ORTHO05D009058 4.0e-38 162.2 190 53.7
vmacro09892 Vaccinium macrocarpon HOM05D007220 ORTHO05D009058 4.0e-38 162.2 197 53.8
Actinidia25024 Actinidia chinensis HOM05D007220 ORTHO05D009058 5.3e-38 161.8 201 53.2
EL10Ac3g05813 Beta vulgaris HOM05D007220 ORTHO05D009058 1.5e-37 160.2 198 52.5
Gohir.A07G038900 Gossypium hirsutum HOM05D007220 ORTHO05D009058 1.5e-37 160.2 189 51.9
Rhsim09G0192800 Rhododendron simsii HOM05D007220 ORTHO05D009058 2.0e-37 159.8 203 53.7
BcaB01g04168 Brassica carinata HOM05D007220 ORTHO05D009058 2.6e-37 159.5 191 53.4
Ciclev10005924m.g Citrus clementina HOM05D007220 ORTHO05D009058 3.4e-37 159.1 210 51.4
AUR62016183 Chenopodium quinoa HOM05D007220 ORTHO05D009058 7.6e-37 157.9 203 53.2
Gohir.D07G043100 Gossypium hirsutum HOM05D007220 ORTHO05D009058 7.6e-37 157.9 189 51.3
AT5G51545 Arabidopsis thaliana HOM05D007220 ORTHO05D009058 1.3e-36 157.1 197 50.8
Gorai.001G046100 Gossypium raimondii HOM05D007220 ORTHO05D009058 1.3e-36 157.1 189 51.3
Carub.0008s1158 Capsella rubella HOM05D007220 ORTHO05D009058 1.7e-36 156.8 192 49.5
Ca_30916_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 1.7e-36 156.8 193 50.8
CSS0026352 Camellia sinensis var. sinensis HOM05D007220 ORTHO05D009058 6.4e-36 154.8 104 76.0
SalBow4G2286 Salvia bowleyana HOM05D007220 ORTHO05D009058 1.4e-35 153.7 199 50.8
unitig_46.g18768 Utricularia gibba HOM05D007220 ORTHO05D009058 1.4e-35 153.7 183 50.8
Psat7g150000 Pisum sativum HOM05D007220 ORTHO05D009058 3.2e-35 152.5 197 49.2
Sp6g13740 Schrenkiella parvula HOM05D007220 ORTHO05D009058 4.2e-35 152.1 193 49.7
Medtr4g035825 Medicago truncatula HOM05D007220 ORTHO05D009058 5.4e-35 151.8 194 49.0
Nitab4.5_0001548g0050 Nicotiana tabacum HOM05D007220 ORTHO05D009058 7.1e-35 151.4 176 55.1
HanXRQChr08g0223851 Helianthus annuus HOM05D007220 ORTHO05D009058 1.2e-34 150.6 182 51.6
Nitab4.5_0000072g0560 Nicotiana tabacum HOM05D007220 ORTHO05D009058 1.2e-34 150.6 99 73.7
arahy.Tifrunner.gnm1.ann1.0IXC5E Arachis hypogaea HOM05D007220 ORTHO05D009058 2.7e-34 149.4 189 49.2
SGA_v2.0_scaffold2G01175 Striga asiatica HOM05D007220 ORTHO05D009058 3.5e-34 149.1 198 49.5
SGA_v2.0_scaffold486G52391 Striga asiatica HOM05D007220 ORTHO05D009058 4.6e-34 148.7 189 53.4
CAN.G152.17 Capsicum annuum HOM05D007220 ORTHO05D009058 7.8e-34 147.9 99 75.8
VMungo1127G0384 Vigna mungo HOM05D007220 ORTHO05D009058 1.0e-33 147.5 203 49.8
ECA233G2338 Erigeron canadensis HOM05D007220 ORTHO05D009058 1.7e-33 146.7 156 53.2
A03p16110 Brassica napus HOM05D007220 ORTHO05D009058 2.3e-33 146.4 187 48.7
Atru.chr1.664 Acer truncatum HOM05D007220 ORTHO05D009058 3.0e-33 146.0 203 46.8
Lsat_1_v5_gn_8_9340 Lactuca sativa HOM05D007220 ORTHO05D009058 3.0e-33 146.0 185 50.8
Sopen03g023380 Solanum pennellii HOM05D007220 ORTHO05D009058 3.9e-33 145.6 99 71.7
Peaxi162Scf00241g00624 Petunia axillaris HOM05D007220 ORTHO05D009058 5.1e-33 145.2 175 50.9
Migut.F00451 Erythranthe guttata HOM05D007220 ORTHO05D009058 1.9e-32 143.3 97 73.2
Solyc03g083570.3 Solanum lycopersicum HOM05D007220 ORTHO05D009058 5.6e-32 141.7 180 50.0
Lj3g0016008 Lotus japonicus HOM05D007220 ORTHO05D009058 7.3e-32 141.4 139 57.6
Aqoxy7G00673 Aquilegia oxysepala HOM05D007220 ORTHO05D009058 1.6e-31 140.2 127 57.5
Phvul.011G004500 Phaseolus vulgaris HOM05D007220 ORTHO05D009058 2.8e-31 139.4 199 47.7
CARHR264320 Cardamine hirsuta HOM05D007220 ORTHO05D009058 1.2e-29 134.0 192 44.8
Aa31LG3G7960 Aethionema arabicum HOM05D007220 ORTHO05D009058 4.5e-29 132.1 189 47.1
CDE09G0763 Ceratophyllum demersum HOM05D007220 ORTHO05D009058 5.8e-29 131.7 162 48.8
Lj8A39T34 Lonicera japonica HOM05D007220 ORTHO05D009058 5.8e-29 131.7 202 47.0
Prupe.2G280700 Prunus persica HOM05D007220 ORTHO05D009058 1.7e-28 130.2 144 54.2
PSO782G3417 Papaver somniferum HOM05D007220 ORTHO05D009058 2.7e-26 122.9 113 51.3
PSO478G4327 Papaver somniferum HOM05D007220 ORTHO05D009058 1.3e-25 120.6 113 49.6
arahy.Tifrunner.gnm1.ann1.83G6QR Arachis hypogaea HOM05D007220 ORTHO05D009058 3.0e-25 119.4 165 46.7
Zm00001eb230760 Zea mays HOM05D007220 ORTHO05D009058 1.5e-24 117.1 148 47.3
SEGI_29714 Sequoiadendron giganteum HOM05D007220 ORTHO05D009058 4.3e-24 115.5 118 54.2
HPP92_002073 Vanilla planifolia HOM05D007220 ORTHO05D009058 4.8e-23 112.1 189 38.1
PGSC0003DMG400023001 Solanum tuberosum HOM05D007220 ORTHO05D009058 8.1e-23 111.3 166 41.6
TPR.G15117 Trifolium pratense HOM05D007220 ORTHO05D009058 1.8e-22 110.2 71 71.8
AUR62035102 Chenopodium quinoa HOM05D007220 ORTHO05D009058 6.9e-22 108.2 199 43.7
Sed0003033 Sechium edule HOM05D007220 ORTHO05D009058 7.6e-21 104.8 159 52.8
ATR0730G016 Amborella trichopoda HOM05D007220 ORTHO05D009058 2.9e-20 102.8 118 50.0
Potri.012G128000 Populus trichocarpa HOM05D007220 ORTHO05D009058 1.9e-19 100.1 210 41.9
Pp3c26_11240 Physcomitrium patens HOM05D007220 ORTHO05D009058 3.0e-17 92.8 119 48.7
TAR629G2293 Trochodendron aralioides HOM05D007220 ORTHO05D009058 5.6e-16 88.6 161 45.3
MD07G1256600 Malus domestica HOM05D007220 ORTHO05D009058 1.6e-15 87.0 53 73.6
DCAR_009422 Daucus carota HOM05D007220 ORTHO05D009058 4.0e-14 82.4 146 42.5
DCAR_009423 Daucus carota HOM05D007220 ORTHO05D009058 4.0e-14 82.4 146 42.5
Mapoly0002s0242 Marchantia polymorpha HOM05D007220 ORTHO05D009058 2.0e-13 80.1 77 48.1
Ca_20051_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 5.8e-13 78.6 145 41.4
AagrBONN_evm.TU.Sc2ySwM_228.5821 Anthoceros agrestis HOM05D007220 ORTHO05D009058 1.7e-12 77.0 143 38.5
HanXRQChr04g0107801 Helianthus annuus HOM05D000901 ORTHO05D001160 2.9e-12 76.3 141 41.1
MBI12_g20320_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 5.5e-11 72.0 172 35.5
Ah.07g208070 Amaranthus hybridus HOM05D000130 ORTHO05D009058 2.3e-09 66.6 156 40.4
MBI12_g14970_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 2.3e-09 66.6 58 60.3
MBI12_g25331_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 1.4e-06 57.4 127 35.4


User provided reference genes

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