Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_13820 Corylus avellana HOM05D007548 ORTHO05D009527 6.3e-172 607.4 327 100.0
Cfa008236 Carpinus fangiana HOM05D007548 ORTHO05D009527 1.1e-147 526.9 327 89.9
CiPaw.03G097400 Carya illinoinensis HOM05D007548 ORTHO05D009527 6.8e-94 348.2 322 68.6
Duzib068G0425 Durio zibethinus HOM05D007548 ORTHO05D009527 8.4e-76 288.1 322 59.6
Thecc.03G162900 Theobroma cacao HOM05D007548 ORTHO05D009527 2.1e-74 283.5 321 59.5
Prupe.2G283000 Prunus persica HOM05D007548 ORTHO05D009527 1.5e-72 277.3 322 58.7
FAN03G1824 Fragaria x ananassa HOM05D007548 ORTHO05D009527 1.0e-68 264.6 313 58.1
FvH4_7g28270 Fragaria vesca HOM05D007548 ORTHO05D009527 2.2e-68 263.5 313 58.1
FAN06G3028 Fragaria x ananassa HOM05D007548 ORTHO05D009527 2.2e-68 263.5 313 58.1
FAN06G3476 Fragaria x ananassa HOM05D007548 ORTHO05D009527 2.2e-68 263.5 313 58.1
Potri.015G132000 Populus trichocarpa HOM05D007548 ORTHO05D009527 2.9e-68 263.1 316 56.3
Atru.chr1.619 Acer truncatum HOM05D007548 ORTHO05D009527 2.1e-63 246.9 293 58.4
TWI39G0023 Tripterygium wilfordii HOM05D007548 ORTHO05D009527 3.7e-63 246.1 331 54.4
FAN01G2764 Fragaria x ananassa HOM05D007548 ORTHO05D009527 6.2e-63 245.4 312 55.1
Manes.06G138600 Manihot esculenta HOM05D007548 ORTHO05D009527 1.5e-61 240.7 319 53.3
Ciclev10007148m.g Citrus clementina HOM05D007548 ORTHO05D009527 3.2e-59 233.0 271 59.8
FAN03G2953 Fragaria x ananassa HOM05D007548 ORTHO05D009527 7.1e-59 231.9 279 58.4
TAR636G2044 Trochodendron aralioides HOM05D007548 ORTHO05D009527 1.2e-58 231.1 306 53.3
RcHm_v2.0_Chr1g0375221 Rosa chinensis HOM05D007548 ORTHO05D009527 6.1e-58 228.8 276 58.0
Gorai.008G283300 Gossypium raimondii HOM05D007548 ORTHO05D009527 6.9e-54 215.3 298 53.0
Gohir.D12G264100 Gossypium hirsutum HOM05D007548 ORTHO05D009527 1.5e-53 214.2 305 48.9
CANSAT80G1542 Cannabis sativa HOM05D007548 ORTHO05D009527 2.2e-52 210.3 293 52.6
Gohir.A12G263800 Gossypium hirsutum HOM05D007548 ORTHO05D009527 2.9e-52 209.9 322 50.0
COL.COLO4_14190 Corchorus olitorius HOM05D007548 ORTHO05D009527 5.1e-49 199.1 241 55.6
Glyma.10G242400 Glycine max HOM05D007548 ORTHO05D009527 5.1e-49 199.1 311 49.5
Rhsim03G0172300 Rhododendron simsii HOM05D007548 ORTHO05D009527 4.3e-48 196.1 329 49.5
Eucgr.K00142 Eucalyptus grandis HOM05D007548 ORTHO05D009527 2.2e-47 193.7 296 50.0
Manes.14G032600 Manihot esculenta HOM05D007548 ORTHO05D009527 2.8e-47 193.4 286 47.2
Peaxi162Scf00192g00096 Petunia axillaris HOM05D007548 ORTHO05D009527 9.1e-46 188.3 291 49.5
DCAR_018129 Daucus carota HOM05D007548 ORTHO05D009527 2.0e-45 187.2 329 45.9
Glyma.20G151700 Glycine max HOM05D007548 ORTHO05D009527 3.4e-45 186.4 315 47.0
Medtr1g102510 Medicago truncatula HOM05D007548 ORTHO05D009527 1.0e-44 184.9 304 41.4
Lj5g0018367 Lotus japonicus HOM05D007548 ORTHO05D009527 2.2e-44 183.7 316 47.8
Actinidia13550 Actinidia chinensis HOM05D007548 ORTHO05D009527 4.2e-43 179.5 314 45.2
Phvul.007G063100 Phaseolus vulgaris HOM05D007548 ORTHO05D009527 7.2e-43 178.7 310 45.5
Oeu021733.1 Olea europaea HOM05D007548 ORTHO05D009527 1.4e-41 174.5 321 48.9
Oeu021734.1 Olea europaea HOM05D007548 ORTHO05D009527 1.4e-41 174.5 321 48.6
Cc02_g03840 Coffea canephora HOM05D007548 ORTHO05D009527 1.8e-41 174.1 320 45.3
MSTRG.27166 Avicennia marina HOM05D007548 ORTHO05D009527 3.0e-41 173.3 344 46.2
Psat6g202320 Pisum sativum HOM05D007548 ORTHO05D009527 3.9e-41 172.9 306 45.8
SalBow4G1498 Salvia bowleyana HOM05D007548 ORTHO05D009527 1.1e-40 171.4 318 46.2
Cpa.g.sc13.212 Carica papaya HOM05D007548 ORTHO05D009527 5.7e-40 169.1 320 46.9
Actinidia25043 Actinidia chinensis HOM05D007548 ORTHO05D009527 2.2e-39 167.2 314 43.9
Nitab4.5_0008495g0030 Nicotiana tabacum HOM05D007548 ORTHO05D009527 2.4e-38 163.7 326 45.1
Aa31LG3G8110 Aethionema arabicum HOM05D007548 ORTHO05D009527 7.0e-38 162.2 358 41.1
Nn1g01184 Nelumbo nucifera HOM05D007548 ORTHO05D009527 7.0e-38 162.2 287 45.6
Lj8A35G80 Lonicera japonica HOM05D007548 ORTHO05D009527 3.5e-37 159.8 282 48.6
arahy.Tifrunner.gnm1.ann1.J4U887 Arachis hypogaea HOM05D001870 ORTHO05D001797 1.3e-36 157.9 306 44.8
Nitab4.5_0000072g0300 Nicotiana tabacum HOM05D007548 ORTHO05D009527 5.0e-36 156.0 329 43.8
arahy.Tifrunner.gnm1.ann1.WA56KQ Arachis hypogaea HOM05D001870 ORTHO05D001797 8.5e-36 155.2 306 44.1
Nn4g26440 Nelumbo nucifera HOM05D007548 ORTHO05D009527 1.5e-35 154.5 340 38.8
THA.LOC104798720 Tarenaya hassleriana HOM05D007548 ORTHO05D009527 1.9e-35 154.1 343 43.1
VMungo0720G2396 Vigna mungo HOM05D007548 ORTHO05D009527 7.2e-35 152.1 266 47.0
AL8G25930 Arabidopsis lyrata HOM05D007548 ORTHO05D009527 2.1e-34 150.6 354 42.1
Migut.F00422 Erythranthe guttata HOM05D007548 ORTHO05D009527 6.1e-34 149.1 309 44.7
PGR142G1046 Punica granatum HOM05D007548 ORTHO05D009527 1.8e-33 147.5 474 31.4
Carub.0008s1170 Capsella rubella HOM05D007548 ORTHO05D009527 1.1e-32 144.8 344 41.9
SalBow4G2379 Salvia bowleyana HOM05D007548 ORTHO05D009527 2.0e-32 144.1 275 46.9
Dinv07997 Davidia involucrata HOM05D007548 ORTHO05D009527 2.6e-32 143.7 233 50.2
AT5G51680 Arabidopsis thaliana HOM05D007548 ORTHO05D009527 3.3e-32 143.3 360 40.8
Sopen03g003070 Solanum pennellii HOM05D007548 ORTHO05D009527 8.2e-31 138.7 323 42.7
CARHR264530 Cardamine hirsuta HOM05D007548 ORTHO05D009527 1.1e-30 138.3 338 41.4
Lalb_Chr21g0304861 Lupinus albus HOM05D007548 ORTHO05D009527 4.1e-30 136.3 304 41.1
EL10Ac3g05788 Beta vulgaris HOM05D007548 ORTHO05D009527 3.5e-29 133.3 304 41.1
GSVIVG01018495001 Vitis vinifera HOM05D007548 ORTHO05D009527 1.0e-28 131.7 169 51.5
Thhalv10014011m.g Eutrema salsugineum HOM05D007548 ORTHO05D009527 2.9e-28 130.2 352 37.8
AUR62035044 Chenopodium quinoa HOM05D007548 ORTHO05D009527 1.9e-27 127.5 302 41.1
AUR62016096 Chenopodium quinoa HOM05D007548 ORTHO05D009527 9.4e-27 125.2 302 41.1
TPR.G26079 Trifolium pratense HOM05D007548 ORTHO05D009527 1.6e-26 124.4 304 38.2
Ah.07g208330 Amaranthus hybridus HOM05D007548 ORTHO05D009527 3.6e-26 123.2 304 39.1
PSO782G0883 Papaver somniferum HOM05D007548 ORTHO05D009527 4.7e-26 122.9 316 37.7
PGSC0003DMG400031012 Solanum tuberosum HOM05D007548 ORTHO05D009527 1.4e-25 121.3 333 40.2
SGA_v2.0_scaffold2G01130 Striga asiatica HOM05D007548 ORTHO05D009527 3.4e-24 116.7 283 39.2
FAN10G1395 Fragaria x ananassa HOM05D007548 ORTHO05D009527 1.7e-23 114.4 201 47.8
Sp6g13900 Schrenkiella parvula HOM05D007548 ORTHO05D009527 6.3e-23 112.5 408 34.6
Solyc03g007080.4 Solanum lycopersicum HOM05D007548 ORTHO05D009527 3.1e-22 110.2 257 40.9
Aqoxy7G00579 Aquilegia oxysepala HOM05D007548 ORTHO05D009527 1.6e-21 107.8 375 34.9
HanXRQChr05g0141371 Helianthus annuus HOM05D007548 ORTHO05D009527 2.0e-21 107.5 278 38.5
BcaB08g35518 Brassica carinata HOM05D007548 ORTHO05D009527 7.7e-21 105.5 362 37.8
A10p09560 Brassica napus HOM05D007548 ORTHO05D009527 1.5e-19 101.3 354 36.7
PSO478G0091 Papaver somniferum HOM05D007548 ORTHO05D009527 5.5e-19 99.4 268 36.2
Lsat_1_v5_gn_8_8041 Lactuca sativa HOM05D007548 ORTHO05D009527 9.4e-19 98.6 315 36.8
BcaC04g20644 Brassica carinata HOM05D007548 ORTHO05D009527 1.2e-18 98.2 357 35.6
C09p41110 Brassica napus HOM05D007548 ORTHO05D009527 1.2e-18 98.2 357 35.6
BolC9t56989H Brassica oleracea HOM05D007548 ORTHO05D009527 1.2e-18 98.2 357 35.6
BraA10t43031Z Brassica rapa HOM05D007548 ORTHO05D009527 2.3e-17 94.0 353 35.1
arahy.Tifrunner.gnm1.ann1.1QTB59 Arachis hypogaea HOM05D007548 ORTHO05D009527 6.8e-17 92.4 265 35.8
unitig_37.g12505 Utricularia gibba HOM05D007548 ORTHO05D009527 2.0e-16 90.9 261 41.0
arahy.Tifrunner.gnm1.ann1.Z61DE3 Arachis hypogaea HOM05D007548 ORTHO05D009527 2.6e-16 90.5 267 34.1
Sc25g0000160 Simmondsia chinensis HOM05D007548 ORTHO05D009527 7.5e-16 89.0 305 33.4
SGA_v2.0_scaffold486G52377 Striga asiatica HOM05D007548 ORTHO05D009527 4.5e-13 79.7 307 35.5
Ah.13g067520 Amaranthus hybridus HOM05D007548 ORTHO05D009527 8.6e-12 75.5 244 33.2
ECA233G0652 Erigeron canadensis HOM05D007548 ORTHO05D009527 3.7e-07 60.1 296 32.8
MBI17_g42494_MAGBIO Magnolia biondii HOM05D007548 ORTHO05D009527 8.3e-07 58.9 159 39.0
A02p12160 Brassica napus HOM05D007548 ORTHO05D009527 1.8e-06 57.8 322 27.3
arahy.Tifrunner.gnm1.ann1.VN71XR Arachis hypogaea HOM05D000324 ORTHO05D010724 7.0e-06 55.8 240 29.2
BolC2t08158H Brassica oleracea HOM05D007548 ORTHO05D009527 9.2e-06 55.5 318 30.5


User provided reference genes

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