Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_13710 Corylus avellana HOM05D000073 ORTHO05D164431 1.4e-47 192.6 97 100.0
Haze_03254 Corylus avellana HOM05D000073 ORTHO05D000033 9.6e-20 100.1 74 67.6
Haze_03255 Corylus avellana HOM05D000073 ORTHO05D000033 1.4e-18 96.3 75 64.0
Cfa023573 Carpinus fangiana HOM05D000073 ORTHO05D000033 2.4e-18 95.5 75 61.3
Haze_13695 Corylus avellana HOM05D000073 ORTHO05D000033 1.0e-16 90.1 72 63.9
Haze_02488 Corylus avellana HOM05D000073 ORTHO05D000033 1.9e-15 85.9 74 56.8
QL04p004115 Quercus lobata HOM05D000073 ORTHO05D000033 4.8e-11 71.2 71 47.9
QL04p004065 Quercus lobata HOM05D000073 ORTHO05D000033 1.8e-10 69.3 62 53.2
Haze_03256 Corylus avellana HOM05D000073 ORTHO05D000033 2.4e-10 68.9 57 57.9
TAR633G0115 Trochodendron aralioides HOM05D000073 ORTHO05D000033 4.1e-10 68.2 70 44.3
TAR633G0088 Trochodendron aralioides HOM05D000073 ORTHO05D000033 6.9e-10 67.4 70 44.3
QL04p004189 Quercus lobata HOM05D000073 ORTHO05D000033 2.6e-09 65.5 65 53.8
Rhsim07G0051500 Rhododendron simsii HOM05D000073 ORTHO05D000033 2.6e-09 65.5 74 47.3
TWI09G1288 Tripterygium wilfordii HOM05D000073 ORTHO05D000033 5.9e-09 64.3 80 46.2
Cc00_g33540 Coffea canephora HOM05D000073 ORTHO05D000033 1.0e-08 63.5 97 35.1
Haze_03498 Corylus avellana HOM05D000073 ORTHO05D000033 1.0e-08 63.5 69 43.5
QL04p003936 Quercus lobata HOM05D000073 ORTHO05D000033 1.3e-08 63.2 84 39.3
QL04p004273 Quercus lobata HOM05D000073 ORTHO05D000033 1.3e-08 63.2 84 39.3
Gohir.A12G252450 Gossypium hirsutum HOM05D000073 ORTHO05D000033 2.2e-08 62.4 84 45.2
QL04p003527 Quercus lobata HOM05D000073 ORTHO05D000033 2.9e-08 62.0 102 32.4
Sabra16G0135600 Salix brachista HOM05D000073 ORTHO05D000033 2.9e-08 62.0 79 43.0
vmacro13630 Vaccinium macrocarpon HOM05D000073 ORTHO05D000033 2.9e-08 62.0 63 49.2
Gorai.008G271500 Gossypium raimondii HOM05D000073 ORTHO05D000033 8.5e-08 60.5 54 57.4
Os04g0474900 Oryza sativa ssp. japonica HOM05D000073 ORTHO05D000033 8.5e-08 60.5 70 41.4
Gohir.D12G253000 Gossypium hirsutum HOM05D000073 ORTHO05D000033 1.1e-07 60.1 54 55.6
TWI73G1159 Tripterygium wilfordii HOM05D000073 ORTHO05D000033 1.1e-07 60.1 80 43.8
Duzib205G0293 Durio zibethinus HOM05D000073 ORTHO05D000033 1.4e-07 59.7 59 50.8
Rhsim07G0051300 Rhododendron simsii HOM05D000073 ORTHO05D000033 1.4e-07 59.7 69 43.5
GSVIVG01032023001 Vitis vinifera HOM05D000073 ORTHO05D000033 1.9e-07 59.3 65 47.7
Ciclev10031209m.g Citrus clementina HOM05D000073 ORTHO05D000033 2.5e-07 58.9 70 38.6
Dinv43916 Davidia involucrata HOM05D000073 ORTHO05D000033 2.5e-07 58.9 70 41.4
Manes.14G014600 Manihot esculenta HOM05D000073 ORTHO05D000033 2.5e-07 58.9 65 44.6
Manes.14G014700 Manihot esculenta HOM05D000073 ORTHO05D000033 2.5e-07 58.9 70 41.4
PGR031G3870 Punica granatum HOM05D000073 ORTHO05D000033 2.5e-07 58.9 77 35.1
GSVIVG01032018001 Vitis vinifera HOM05D000073 ORTHO05D000033 2.5e-07 58.9 65 47.7
Cfa010567 Carpinus fangiana HOM05D000073 ORTHO05D000033 3.2e-07 58.5 65 43.1
Haze_03497 Corylus avellana HOM05D000073 ORTHO05D000033 3.2e-07 58.5 65 43.1
Dinv43922 Davidia involucrata HOM05D000073 ORTHO05D000033 3.2e-07 58.5 70 41.4
GSVIVG01032007001 Vitis vinifera HOM05D000073 ORTHO05D000033 3.2e-07 58.5 82 39.0
Gohir.D12G253800 Gossypium hirsutum HOM05D000073 ORTHO05D000033 4.2e-07 58.2 54 53.7
Hma1.2p1_1089F.1_g255660 Hydrangea macrophylla HOM05D000073 ORTHO05D000033 4.2e-07 58.2 65 43.1
Rhsim07G0051600 Rhododendron simsii HOM05D000073 ORTHO05D000033 4.2e-07 58.2 63 46.0
Thecc.03G191600 Theobroma cacao HOM05D000073 ORTHO05D000033 4.2e-07 58.2 56 50.0
Migut.N01642 Erythranthe guttata HOM05D000073 ORTHO05D000033 5.5e-07 57.8 84 39.3
GSVIVG01032025001 Vitis vinifera HOM05D000073 ORTHO05D000033 5.5e-07 57.8 67 43.3
ATR0605G145 Amborella trichopoda HOM05D000073 ORTHO05D000033 7.2e-07 57.4 70 42.9
Cc09_g06240 Coffea canephora HOM05D000073 ORTHO05D000033 7.2e-07 57.4 87 34.5
Oeu010363.1 Olea europaea HOM05D000073 ORTHO05D000033 7.2e-07 57.4 70 38.6
Os04g0474800 Oryza sativa ssp. japonica HOM05D000073 ORTHO05D000033 7.2e-07 57.4 70 38.6
Potri.001G227300 Populus trichocarpa HOM05D000073 ORTHO05D000033 7.2e-07 57.4 62 45.2
Potri.001G227400 Populus trichocarpa HOM05D000073 ORTHO05D000033 7.2e-07 57.4 62 45.2
QL04p003404 Quercus lobata HOM05D000073 ORTHO05D000033 7.2e-07 57.4 65 43.1
QL04p003517 Quercus lobata HOM05D000073 ORTHO05D000033 7.2e-07 57.4 67 40.3
QL04p004005 Quercus lobata HOM05D000073 ORTHO05D000033 7.2e-07 57.4 70 40.0
QL04p004025 Quercus lobata HOM05D000073 ORTHO05D000033 7.2e-07 57.4 70 40.0
Thecc.01G415600 Theobroma cacao HOM05D000073 ORTHO05D000033 7.2e-07 57.4 59 42.4
vmacro13625 Vaccinium macrocarpon HOM05D000073 ORTHO05D000033 7.2e-07 57.4 65 44.6
vmacro13626 Vaccinium macrocarpon HOM05D000073 ORTHO05D000033 7.2e-07 57.4 65 44.6
GSVIVG01032008001 Vitis vinifera HOM05D000073 ORTHO05D000033 7.2e-07 57.4 71 43.7
CiPaw.14G092900 Carya illinoinensis HOM05D000073 ORTHO05D000033 9.3e-07 57.0 70 40.0
Ciclev10031179m.g Citrus clementina HOM05D000073 ORTHO05D000033 9.3e-07 57.0 86 34.9
Ciclev10033361m.g Citrus clementina HOM05D000073 ORTHO05D000033 9.3e-07 57.0 82 36.6
Cc02_g27230 Coffea canephora HOM05D000073 ORTHO05D000033 9.3e-07 57.0 70 37.1
Cc03_g10330 Coffea canephora HOM05D000073 ORTHO05D000033 9.3e-07 57.0 102 33.3
Medtr3g026620 Medicago truncatula HOM05D000073 ORTHO05D000033 9.3e-07 57.0 70 40.0
PGR102G2887 Punica granatum HOM05D000073 ORTHO05D000033 9.3e-07 57.0 82 35.4
QL01p007045 Quercus lobata HOM05D000073 ORTHO05D000033 9.3e-07 57.0 92 35.9
QL04p003995 Quercus lobata HOM05D000073 ORTHO05D000033 9.3e-07 57.0 85 34.1
GSVIVG01032017001 Vitis vinifera HOM05D000073 ORTHO05D000033 9.3e-07 57.0 81 42.0
CSS0014242 Camellia sinensis var. sinensis HOM05D000073 ORTHO05D000033 1.2e-06 56.6 84 35.7
Cc00_g32220 Coffea canephora HOM05D000073 ORTHO05D000033 1.2e-06 56.6 88 35.2
Eucgr.B03661 Eucalyptus grandis HOM05D000073 ORTHO05D000033 1.2e-06 56.6 70 38.6
PGR102G2148 Punica granatum HOM05D000073 ORTHO05D000033 1.2e-06 56.6 82 35.4
QL01p007082 Quercus lobata HOM05D000073 ORTHO05D000033 1.2e-06 56.6 92 35.9
QL01p007186 Quercus lobata HOM05D000073 ORTHO05D000033 1.2e-06 56.6 92 35.9
MELO3C015223.2 Cucumis melo HOM05D000073 ORTHO05D000033 1.6e-06 56.2 65 44.6
Migut.O00524 Erythranthe guttata HOM05D000073 ORTHO05D000033 1.6e-06 56.2 78 42.3
Psat5g206440 Pisum sativum HOM05D000073 ORTHO05D000033 1.6e-06 56.2 65 44.6
Potri.001G227200 Populus trichocarpa HOM05D000073 ORTHO05D000033 1.6e-06 56.2 63 41.3
Sabra16G0135800 Salix brachista HOM05D000073 ORTHO05D000033 1.6e-06 56.2 67 44.8
Aa31sc1796G10 Aethionema arabicum HOM05D000073 ORTHO05D000033 2.1e-06 55.8 82 39.0
Gohir.A12G252500 Gossypium hirsutum HOM05D000073 ORTHO05D000033 2.1e-06 55.8 54 53.7
Nn2g15603 Nelumbo nucifera HOM05D000073 ORTHO05D000033 2.1e-06 55.8 71 42.3
QL01p007009 Quercus lobata HOM05D000073 ORTHO05D000033 2.1e-06 55.8 70 38.6
QL04p003453 Quercus lobata HOM05D000073 ORTHO05D000033 2.1e-06 55.8 70 40.0
AT3G18080 Arabidopsis thaliana HOM05D000073 ORTHO05D000033 2.7e-06 55.5 95 31.6
CSS0017631 Camellia sinensis var. sinensis HOM05D000073 ORTHO05D000033 2.7e-06 55.5 65 40.0
CAN.G361.12 Capsicum annuum HOM05D000073 ORTHO05D000033 2.7e-06 55.5 76 39.5
Ciclev10031178m.g Citrus clementina HOM05D000073 ORTHO05D000033 2.7e-06 55.5 66 39.4
CsaV3_1G042470 Cucumis sativus L. HOM05D000073 ORTHO05D000033 2.7e-06 55.5 65 43.1
Eucgr.B03656 Eucalyptus grandis HOM05D000073 ORTHO05D000033 2.7e-06 55.5 73 39.7
Lj9C627T9 Lonicera japonica HOM05D000073 ORTHO05D000033 2.7e-06 55.5 89 31.5
RcHm_v2.0_Chr1g0313711 Rosa chinensis HOM05D000073 ORTHO05D000033 2.7e-06 55.5 82 39.0
Cc02_g27260 Coffea canephora HOM05D000073 ORTHO05D000033 3.6e-06 55.1 67 40.3
Hma1.2p1_1089F.1_g255655 Hydrangea macrophylla HOM05D000073 ORTHO05D000033 3.6e-06 55.1 65 41.5
MD09G1243300 Malus domestica HOM05D000073 ORTHO05D000033 3.6e-06 55.1 62 43.5
Nn2g15601 Nelumbo nucifera HOM05D000073 ORTHO05D000033 3.6e-06 55.1 62 43.5
Nitab4.5_0004445g0050 Nicotiana tabacum HOM05D000073 ORTHO05D000033 3.6e-06 55.1 65 41.5
GSVIVG01032015001 Vitis vinifera HOM05D000073 ORTHO05D000033 3.6e-06 55.1 82 35.4
Cfa009677 Carpinus fangiana HOM05D000073 ORTHO05D000033 4.6e-06 54.7 99 33.3
Eucgr.B03657 Eucalyptus grandis HOM05D000073 ORTHO05D000033 4.6e-06 54.7 40 55.0
MD11G1023700 Malus domestica HOM05D000073 ORTHO05D000033 4.6e-06 54.7 71 36.6
QL04p003496 Quercus lobata HOM05D000073 ORTHO05D000033 4.6e-06 54.7 67 38.8
Sed0019657 Sechium edule HOM05D000073 ORTHO05D000033 4.6e-06 54.7 65 43.1
CSS0003115 Camellia sinensis var. sinensis HOM05D000073 ORTHO05D000033 6.1e-06 54.3 69 34.8
Cpa.g.sc444.2 Carica papaya HOM05D000073 ORTHO05D000033 6.1e-06 54.3 70 35.7
Cfa009680 Carpinus fangiana HOM05D000073 ORTHO05D000033 6.1e-06 54.3 95 34.7
Eucgr.B03659 Eucalyptus grandis HOM05D000073 ORTHO05D000033 6.1e-06 54.3 71 40.8
Os09g0491100 Oryza sativa ssp. japonica HOM05D000073 ORTHO05D000033 6.1e-06 54.3 69 37.7
CANSAT11G0319 Cannabis sativa HOM05D000073 ORTHO05D000033 7.9e-06 53.9 80 40.0
Cc02_g27290 Coffea canephora HOM05D000073 ORTHO05D000033 7.9e-06 53.9 58 43.1
Eucgr.B03654 Eucalyptus grandis HOM05D000073 ORTHO05D000033 7.9e-06 53.9 82 34.1
QL01p006418 Quercus lobata HOM05D000073 ORTHO05D000033 7.9e-06 53.9 70 42.9
QL01p007103 Quercus lobata HOM05D000073 ORTHO05D000033 7.9e-06 53.9 70 37.1


User provided reference genes

Program Settings