Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_13620 Corylus avellana HOM05D003643 ORTHO05D005001 2.1e-169 599.0 303 100.0
Cfa023544 Carpinus fangiana HOM05D003643 ORTHO05D005001 7.6e-148 527.3 275 97.1
CiPaw.03G114100 Carya illinoinensis HOM05D003643 ORTHO05D005001 6.5e-131 471.1 275 85.8
Atru.chr1.1970 Acer truncatum HOM05D003643 ORTHO05D005001 1.2e-124 450.3 275 81.5
Potri.004G075600 Populus trichocarpa HOM05D003643 ORTHO05D005001 5.9e-124 448.0 275 82.2
Manes.01G122000 Manihot esculenta HOM05D003643 ORTHO05D005001 3.8e-123 445.3 275 81.1
Dinv35809 Davidia involucrata HOM05D003643 ORTHO05D005001 6.5e-123 444.5 275 81.8
COL.COLO4_08070 Corchorus olitorius HOM05D003643 ORTHO05D005001 1.1e-122 443.7 299 75.9
CANSAT21G2447 Cannabis sativa HOM05D003643 ORTHO05D005001 1.6e-121 439.9 275 78.9
Glyma.07G222900 Glycine max HOM05D003643 ORTHO05D005001 2.1e-121 439.5 276 80.4
Eucgr.D01040 Eucalyptus grandis HOM05D003643 ORTHO05D005001 3.6e-121 438.7 276 81.5
Phvul.003G000252 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 3.6e-121 438.7 276 80.8
Phvul.L001601 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 3.6e-121 438.7 276 80.8
Phvul.L009001 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 3.6e-121 438.7 276 80.8
Glyma.20G021900 Glycine max HOM05D003643 ORTHO05D005001 1.0e-120 437.2 276 79.0
GSVIVG01012096001 Vitis vinifera HOM05D003643 ORTHO05D005001 1.4e-120 436.8 275 78.9
VMungo0251G0454 Vigna mungo HOM05D003643 ORTHO05D005001 3.0e-120 435.6 275 78.9
TWI77G0757 Tripterygium wilfordii HOM05D003643 ORTHO05D005001 2.0e-119 433.0 276 80.8
CSS0005005 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 7.4e-119 431.0 275 77.5
Cpa.g.sc178.8 Carica papaya HOM05D003643 ORTHO05D005001 7.4e-119 431.0 275 77.5
Prupe.4G109100 Prunus persica HOM05D003643 ORTHO05D005001 9.7e-119 430.6 275 77.8
Actinidia22386 Actinidia chinensis HOM05D003643 ORTHO05D005001 1.7e-118 429.9 275 78.5
arahy.Tifrunner.gnm1.ann1.PVMC8E Arachis hypogaea HOM05D003643 ORTHO05D005001 1.1e-117 427.2 275 76.7
THA.LOC104822105 Tarenaya hassleriana HOM05D003643 ORTHO05D005001 4.1e-117 425.2 275 77.1
Duzib268G1178 Durio zibethinus HOM05D003643 ORTHO05D005001 7.0e-117 424.5 275 77.5
MD05G1254800 Malus domestica HOM05D003643 ORTHO05D005001 7.0e-117 424.5 275 77.1
CsaV3_1G046560 Cucumis sativus L. HOM05D003643 ORTHO05D005001 1.2e-116 423.7 275 79.3
Lj1g0023184 Lotus japonicus HOM05D003643 ORTHO05D005001 1.6e-116 423.3 275 76.7
Lj1g0022937 Lotus japonicus HOM05D003643 ORTHO05D005001 2.6e-116 422.5 275 76.7
RcHm_v2.0_Chr5g0019781 Rosa chinensis HOM05D003643 ORTHO05D005001 2.6e-116 422.5 275 77.1
QL07p008150 Quercus lobata HOM05D003643 ORTHO05D005001 3.5e-116 422.2 247 85.4
Lalb_Chr16g0385301 Lupinus albus HOM05D003643 ORTHO05D005001 4.5e-116 421.8 275 76.4
Psat0s5231g0040 Pisum sativum HOM05D003643 ORTHO05D005001 4.5e-116 421.8 275 77.5
Cc09_g06330 Coffea canephora HOM05D003643 ORTHO05D005001 5.9e-116 421.4 275 75.6
Sed0017297 Sechium edule HOM05D003643 ORTHO05D005001 7.7e-116 421.0 275 78.5
FvH4_3g12070 Fragaria vesca HOM05D003643 ORTHO05D005001 1.3e-115 420.2 275 76.7
DCAR_007797 Daucus carota HOM05D003643 ORTHO05D005001 1.7e-115 419.9 275 76.7
PGR083G1065 Punica granatum HOM05D003643 ORTHO05D005001 1.7e-115 419.9 275 76.0
MD10G1234900 Malus domestica HOM05D003643 ORTHO05D005001 2.9e-115 419.1 275 76.4
AL7G45920 Arabidopsis lyrata HOM05D003643 ORTHO05D005001 5.0e-115 418.3 275 76.4
Thecc.04G162500 Theobroma cacao HOM05D003643 ORTHO05D005001 5.0e-115 418.3 275 78.5
Ca_18772_v3 Cicer arietinum L. HOM05D003643 ORTHO05D005001 6.5e-115 417.9 275 76.7
FAN21G1938 Fragaria x ananassa HOM05D003643 ORTHO05D005001 6.5e-115 417.9 275 76.0
AT5G37340 Arabidopsis thaliana HOM05D003643 ORTHO05D005001 8.5e-115 417.5 278 76.3
A10p18340 Brassica napus HOM05D003643 ORTHO05D005001 1.1e-114 417.2 275 76.0
BraA10t43914Z Brassica rapa HOM05D003643 ORTHO05D005001 1.1e-114 417.2 275 76.0
TAR365G0076 Trochodendron aralioides HOM05D003643 ORTHO05D005001 1.1e-114 417.2 275 75.3
MELO3C021772.2 Cucumis melo HOM05D003643 ORTHO05D005001 1.5e-114 416.8 275 78.2
BcaB01g04707 Brassica carinata HOM05D003643 ORTHO05D005001 1.9e-114 416.4 275 76.0
Lj1C1143T1 Lonicera japonica HOM05D003643 ORTHO05D005001 1.9e-114 416.4 275 75.6
BcaB08g36427 Brassica carinata HOM05D003643 ORTHO05D005001 3.2e-114 415.6 280 75.4
Carub.0006s2022 Capsella rubella HOM05D003643 ORTHO05D005001 5.5e-114 414.8 275 75.6
FAN25G0143 Fragaria x ananassa HOM05D003643 ORTHO05D005001 9.4e-114 414.1 275 75.3
SpUn0005_0160 Schrenkiella parvula HOM05D003643 ORTHO05D005001 9.4e-114 414.1 276 76.1
BcaC01g06578 Brassica carinata HOM05D003643 ORTHO05D005001 1.6e-113 413.3 275 75.3
BcaC04g19578 Brassica carinata HOM05D003643 ORTHO05D005001 1.6e-113 413.3 280 74.6
Gohir.D10G121400 Gossypium hirsutum HOM05D003643 ORTHO05D005001 1.6e-113 413.3 275 77.1
Gorai.011G133500 Gossypium raimondii HOM05D003643 ORTHO05D005001 1.6e-113 413.3 275 77.1
TPR.G20995 Trifolium pratense HOM05D003643 ORTHO05D005001 1.6e-113 413.3 275 76.7
AT5G22480 Arabidopsis thaliana HOM05D003643 ORTHO05D005001 2.1e-113 412.9 275 76.0
Sabra04G0050300 Salix brachista HOM05D003643 ORTHO05D005001 2.1e-113 412.9 275 76.0
vmacro11251 Vaccinium macrocarpon HOM05D003643 ORTHO05D005001 2.1e-113 412.9 275 76.4
Thhalv10013358m.g Eutrema salsugineum HOM05D003643 ORTHO05D005001 3.6e-113 412.1 278 75.5
AL6G33500 Arabidopsis lyrata HOM05D003643 ORTHO05D005001 4.7e-113 411.8 276 76.1
C09p54110 Brassica napus HOM05D003643 ORTHO05D005001 4.7e-113 411.8 280 74.3
BolC9t58281H Brassica oleracea HOM05D003643 ORTHO05D005001 4.7e-113 411.8 280 74.3
Nitab4.5_0002056g0030 Nicotiana tabacum HOM05D003643 ORTHO05D005001 1.8e-112 409.8 275 74.5
Rhsim04G0157300 Rhododendron simsii HOM05D003643 ORTHO05D005001 2.3e-112 409.5 277 76.9
Thhalv10027733m.g Eutrema salsugineum HOM05D003643 ORTHO05D005001 3.0e-112 409.1 275 75.3
CSS0044821 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 4.0e-112 408.7 275 74.9
Oeu060347.1 Olea europaea HOM05D003643 ORTHO05D005001 4.0e-112 408.7 279 74.2
Sc22g0000430 Simmondsia chinensis HOM05D003643 ORTHO05D005001 6.7e-112 407.9 275 75.3
Solyc02g069120.3 Solanum lycopersicum HOM05D003643 ORTHO05D005001 6.7e-112 407.9 275 73.5
CARHR215770 Cardamine hirsuta HOM05D003643 ORTHO05D005001 8.8e-112 407.5 275 74.9
Psat6g043080 Pisum sativum HOM05D003643 ORTHO05D005001 1.2e-111 407.1 275 75.6
CAN.G1222.6 Capsicum annuum HOM05D003643 ORTHO05D005001 1.5e-111 406.8 275 73.8
BcaB04g18097 Brassica carinata HOM05D003643 ORTHO05D005001 2.0e-111 406.4 276 75.0
A03p10790 Brassica napus HOM05D003643 ORTHO05D005001 4.4e-111 405.2 275 74.2
Sopen02g018250 Solanum pennellii HOM05D003643 ORTHO05D005001 4.4e-111 405.2 275 73.1
Oeu052674.3 Olea europaea HOM05D003643 ORTHO05D005001 5.7e-111 404.8 275 74.2
PGSC0003DMG400010363 Solanum tuberosum HOM05D003643 ORTHO05D005001 5.7e-111 404.8 275 73.5
CARHR191050 Cardamine hirsuta HOM05D003643 ORTHO05D005001 7.5e-111 404.4 275 73.1
arahy.Tifrunner.gnm1.ann1.EU78CH Arachis hypogaea HOM05D003643 ORTHO05D005001 2.8e-110 402.5 275 73.8
Medtr4g083780 Medicago truncatula HOM05D003643 ORTHO05D005001 4.8e-110 401.7 276 74.6
BcaC07g37705 Brassica carinata HOM05D003643 ORTHO05D005001 1.4e-109 400.2 275 74.2
Sp6g22770 Schrenkiella parvula HOM05D003643 ORTHO05D005001 2.4e-109 399.4 278 74.5
Migut.M01969 Erythranthe guttata HOM05D003643 ORTHO05D005001 7.0e-109 397.9 275 73.8
A08p10150 Brassica napus HOM05D003643 ORTHO05D005001 9.1e-109 397.5 279 73.5
BolC3t13712H Brassica oleracea HOM05D003643 ORTHO05D005001 1.6e-108 396.7 278 73.0
BraA03t10388Z Brassica rapa HOM05D003643 ORTHO05D005001 4.5e-108 395.2 286 71.0
HanXRQChr14g0433091 Helianthus annuus HOM05D003643 ORTHO05D005001 5.9e-108 394.8 275 72.7
BraA08t33014Z Brassica rapa HOM05D003643 ORTHO05D005001 1.0e-107 394.0 281 72.6
ECA238G3555 Erigeron canadensis HOM05D003643 ORTHO05D005001 1.0e-107 394.0 275 72.4
SGA_v2.0_scaffold298G47674 Striga asiatica HOM05D003643 ORTHO05D005001 1.0e-107 394.0 290 71.0
ECA246G0187 Erigeron canadensis HOM05D003643 ORTHO05D005001 2.2e-107 392.9 275 73.8
Lsat_1_v5_gn_5_36401 Lactuca sativa HOM05D003643 ORTHO05D005001 2.9e-107 392.5 275 70.9
Ciclev10003667m.g Citrus clementina HOM05D003643 ORTHO05D005001 3.8e-107 392.1 275 73.5
HanXRQChr07g0189641 Helianthus annuus HOM05D003643 ORTHO05D005001 3.8e-107 392.1 275 71.6
FAN16G1159 Fragaria x ananassa HOM05D003643 ORTHO05D005001 8.5e-107 391.0 275 72.7
PSO017G1140 Papaver somniferum HOM05D003643 ORTHO05D005001 1.2e-105 387.1 275 69.5
PSO675G9021 Papaver somniferum HOM05D003643 ORTHO05D005001 1.6e-105 386.7 275 69.5
AUR62010551 Chenopodium quinoa HOM05D003643 ORTHO05D005001 2.1e-105 386.3 279 68.8
Lsat_1_v5_gn_2_29841 Lactuca sativa HOM05D003643 ORTHO05D005001 4.7e-105 385.2 270 71.9
AUR62017342 Chenopodium quinoa HOM05D003643 ORTHO05D005001 1.8e-104 383.3 275 68.4
ClCG01G009340 Citrullus lanatus HOM05D003643 ORTHO05D005001 1.8e-104 383.3 256 77.3
Nn7g37591 Nelumbo nucifera HOM05D003643 ORTHO05D005001 2.3e-104 382.9 279 70.3
CDE02G0779 Ceratophyllum demersum HOM05D003643 ORTHO05D005001 5.7e-103 378.3 277 69.3
SalBow8G4557 Salvia bowleyana HOM05D003643 ORTHO05D005001 9.8e-103 377.5 275 70.5
SalBow8G5428 Salvia bowleyana HOM05D003643 ORTHO05D005001 9.8e-103 377.5 275 70.5
MBI07_g18519_MAGBIO Magnolia biondii HOM05D003643 ORTHO05D005001 2.8e-102 375.9 280 68.2
Phvul.003G000226 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 6.3e-102 374.8 237 80.2
Gohir.1Z049309 Gossypium hirsutum HOM05D003643 ORTHO05D005001 8.3e-102 374.4 247 76.5
Lj1g0023481 Lotus japonicus HOM05D003643 ORTHO05D005001 8.3e-102 374.4 275 69.8
unitig_32.g11672 Utricularia gibba HOM05D003643 ORTHO05D005001 1.6e-100 370.2 275 68.7
Zm00001eb058120 Zea mays HOM05D003643 ORTHO05D005001 4.5e-100 368.6 277 67.5
TPR.G9485 Trifolium pratense HOM05D003643 ORTHO05D005001 2.9e-99 365.9 276 68.5
TPR.G20778 Trifolium pratense HOM05D003643 ORTHO05D005001 3.8e-99 365.5 277 69.0
Pp3c15_5070 Physcomitrium patens HOM05D003643 ORTHO05D005001 5.0e-99 365.2 284 63.4
ATR0743G136 Amborella trichopoda HOM05D003643 ORTHO05D005001 3.2e-98 362.5 283 65.7
EL10Ac5g12673 Beta vulgaris HOM05D003643 ORTHO05D005001 3.2e-98 362.5 346 58.1
Os08g0471900 Oryza sativa ssp. japonica HOM05D003643 ORTHO05D005001 5.5e-98 361.7 275 66.2
SGA_v2.0_scaffold95G28766 Striga asiatica HOM05D003643 ORTHO05D005001 5.5e-98 361.7 275 69.8
HPP92_015903 Vanilla planifolia HOM05D003643 ORTHO05D005001 7.2e-98 361.3 277 67.9
Mapoly0085s0072 Marchantia polymorpha HOM05D003643 ORTHO05D005001 1.8e-96 356.7 292 62.0
Phvul.002G099300 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 3.4e-95 352.4 275 69.1
Ah.12g057940 Amaranthus hybridus HOM05D003643 ORTHO05D005001 1.7e-94 350.1 280 65.4
Peaxi162Scf00149g01022 Petunia axillaris HOM05D003643 ORTHO05D005001 1.7e-94 350.1 252 71.0
Ca_20206_v3 Cicer arietinum L. HOM05D003643 ORTHO05D005001 3.7e-94 349.0 276 66.3
Hund14697 Selenicereus undatus HOM05D003643 ORTHO05D005001 1.8e-93 346.7 288 62.8
Aqoxy5G01635 Aquilegia oxysepala HOM05D003643 ORTHO05D005001 4.1e-93 345.5 275 64.4
Aa31LG9G17620 Aethionema arabicum HOM05D003643 ORTHO05D005001 4.5e-92 342.0 303 61.4
Actinidia36045 Actinidia chinensis HOM05D003643 ORTHO05D005001 1.0e-91 340.9 231 73.2
BolC8t48076H Brassica oleracea HOM05D003643 ORTHO05D005001 1.7e-91 340.1 256 69.5
Nitab4.5_0004569g0010 Nicotiana tabacum HOM05D003643 ORTHO05D005001 8.6e-91 337.8 275 65.5
Hund01937 Selenicereus undatus HOM05D003643 ORTHO05D005001 7.3e-90 334.7 275 62.2
SMO203G0021 Selaginella moellendorffii HOM05D003643 ORTHO05D005001 1.6e-89 333.6 275 61.1
Phvul.003G000304 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.5e-87 327.0 208 79.3
CBR_g6566 Chara braunii HOM05D003643 ORTHO05D005001 4.4e-87 325.5 308 55.5
CBR_g34896 Chara braunii HOM05D003643 ORTHO05D005001 9.8e-87 324.3 308 55.5
Phvul.L001739 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.7e-83 313.5 256 66.8
Peaxi162Scf00128g01142 Petunia axillaris HOM05D003643 ORTHO05D005001 1.8e-80 303.5 275 61.1
Nitab4.5_0002463g0030 Nicotiana tabacum HOM05D003643 ORTHO05D005001 8.9e-80 301.2 275 60.7
Gohir.1Z049318 Gossypium hirsutum HOM05D003643 ORTHO05D005001 7.5e-79 298.1 195 77.4
Phvul.003G000330 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 4.9e-78 295.4 196 77.6
CBR_g6568 Chara braunii HOM05D003643 ORTHO05D005001 2.3e-75 286.6 307 49.5
C03p12370 Brassica napus HOM05D003643 ORTHO05D005001 8.1e-73 278.1 311 51.1
DCAR_017792 Daucus carota HOM05D003643 ORTHO05D005001 2.2e-70 270.0 195 70.3
SEGI_34727 Sequoiadendron giganteum HOM05D003643 ORTHO05D005001 5.6e-66 255.4 203 63.5
Atru.chr3.103 Acer truncatum HOM05D003643 ORTHO05D005001 6.4e-62 241.9 185 69.7
Atru.chr8.2696 Acer truncatum HOM05D003643 ORTHO05D005001 1.6e-52 210.7 296 47.3
ATR0712G001 Amborella trichopoda HOM05D003643 ORTHO05D023464 3.7e-41 172.9 147 60.5
Cfa025656 Carpinus fangiana HOM05D003643 ORTHO05D005001 1.5e-39 167.5 278 38.8
Phvul.003G000278 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.2e-28 131.3 80 81.2
Phvul.L008901 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.2e-28 131.3 72 87.5
CBR_g12037 Chara braunii HOM05D003643 ORTHO05D005001 2.1e-28 130.6 191 40.8
CSS0015856 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 2.7e-28 130.2 73 86.3
Atru.chr8.2585 Acer truncatum HOM05D003643 ORTHO05D005001 7.9e-28 128.6 86 75.6
CSS0009011 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 5.1e-27 125.9 72 86.1
Psat3g171960 Pisum sativum HOM05D003643 ORTHO05D005001 2.8e-25 120.2 173 46.8
Psat6g162200 Pisum sativum HOM05D003643 ORTHO05D005001 1.2e-23 114.8 198 40.9
CSS0030804 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 4.6e-20 102.8 65 76.9
CSS0024414 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 3.9e-19 99.8 65 73.8
CSS0049868 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 1.1e-18 98.2 65 72.3
Lsat_1_v5_gn_5_135000 Lactuca sativa HOM05D003643 ORTHO05D005001 1.9e-18 97.4 78 66.7
CSS0012788 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 3.1e-16 90.1 77 62.3
Psat0s3903g0040 Pisum sativum HOM05D003643 ORTHO05D005001 7.2e-13 79.0 50 80.0
HanXRQChr06g0180401 Helianthus annuus HOM05D003643 ORTHO05D005001 2.0e-10 70.9 38 81.6
Lsat_1_v5_gn_5_54460 Lactuca sativa HOM05D003643 ORTHO05D005001 2.0e-10 70.9 171 32.7
ClCG01G009350 Citrullus lanatus HOM05D003643 ORTHO05D005001 3.1e-08 63.5 99 33.3
RcHm_v2.0_Chr5g0019801 Rosa chinensis HOM05D003643 ORTHO05D005001 2.2e-06 57.4 48 68.8


User provided reference genes

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