Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_13526 Corylus avellana HOM05D005394 ORTHO05D006909 7.2e-205 717.2 418 100.0
Haze_13523 Corylus avellana HOM05D005394 ORTHO05D006909 6.0e-119 431.8 318 78.0
Cfa023066 Carpinus fangiana HOM05D005394 ORTHO05D006909 3.0e-70 270.0 208 76.0
arahy.Tifrunner.gnm1.ann1.C2BK4Q Arachis hypogaea HOM05D005394 ORTHO05D006909 2.7e-66 256.9 232 65.9
arahy.Tifrunner.gnm1.ann1.3I6JR3 Arachis hypogaea HOM05D005394 ORTHO05D006909 2.9e-65 253.4 230 66.1
BcaC08g46016 Brassica carinata HOM05D005394 ORTHO05D006909 6.5e-65 252.3 224 65.6
C06p38110 Brassica napus HOM05D005394 ORTHO05D006909 1.9e-64 250.8 224 65.2
Sp5g22930 Schrenkiella parvula HOM05D005394 ORTHO05D006909 3.2e-64 250.0 225 64.4
BolC6t38908H Brassica oleracea HOM05D005394 ORTHO05D006909 5.5e-64 249.2 224 64.7
BraA07t31074Z Brassica rapa HOM05D005394 ORTHO05D006909 7.2e-64 248.8 226 64.2
THA.LOC104825567 Tarenaya hassleriana HOM05D005394 ORTHO05D006909 7.2e-64 248.8 225 63.6
C06p42040 Brassica napus HOM05D005394 ORTHO05D006909 9.4e-64 248.4 226 63.7
BolC6t39222H Brassica oleracea HOM05D005394 ORTHO05D006909 9.4e-64 248.4 226 63.7
Carub.0002s1442 Capsella rubella HOM05D005394 ORTHO05D006909 1.6e-63 247.7 312 50.3
Cpa.g.sc2.200 Carica papaya HOM05D005394 ORTHO05D006909 1.6e-63 247.7 233 63.1
A07p34470 Brassica napus HOM05D005394 ORTHO05D006909 2.1e-63 247.3 226 63.7
AL2G26730 Arabidopsis lyrata HOM05D005394 ORTHO05D006909 2.7e-63 246.9 225 63.1
BcaC08g46216 Brassica carinata HOM05D005394 ORTHO05D006909 2.7e-63 246.9 226 63.3
AT1G67930 Arabidopsis thaliana HOM05D005394 ORTHO05D006909 1.4e-62 244.6 312 49.4
Ca_06271_v3 Cicer arietinum L. HOM05D005394 ORTHO05D006909 2.3e-62 243.8 225 63.6
Aa31sc829G10 Aethionema arabicum HOM05D005394 ORTHO05D006909 3.0e-62 243.4 312 49.7
Ciclev10030699m.g Citrus clementina HOM05D005394 ORTHO05D006909 3.0e-62 243.4 226 63.3
Atru.BG.36.p Acer truncatum HOM05D005394 ORTHO05D006909 4.0e-62 243.0 233 63.1
BcaB03g15386 Brassica carinata HOM05D005394 ORTHO05D006909 4.0e-62 243.0 313 50.2
Sabra05G0154700 Salix brachista HOM05D005394 ORTHO05D006909 6.8e-62 242.3 226 62.8
Psat0s1569g0040 Pisum sativum HOM05D005394 ORTHO05D006909 1.2e-61 241.5 225 63.1
Manes.01G130300 Manihot esculenta HOM05D005394 ORTHO05D006909 2.6e-61 240.4 289 52.9
COL.COLO4_10088 Corchorus olitorius HOM05D005394 ORTHO05D006909 7.5e-61 238.8 228 61.8
Gohir.A10G140600 Gossypium hirsutum HOM05D005394 ORTHO05D006909 9.8e-61 238.4 228 60.5
Lalb_Chr17g0348211 Lupinus albus HOM05D005394 ORTHO05D006909 9.8e-61 238.4 227 62.1
CARHR060570 Cardamine hirsuta HOM05D005394 ORTHO05D006909 2.2e-60 237.3 224 61.6
ClCG02G018460 Citrullus lanatus HOM05D005394 ORTHO05D006909 2.2e-60 237.3 230 61.3
CsaV3_6G013780 Cucumis sativus L. HOM05D005394 ORTHO05D006909 3.7e-60 236.5 227 61.2
Gorai.011G139100 Gossypium raimondii HOM05D005394 ORTHO05D006909 6.3e-60 235.7 228 61.0
MD09G1149900 Malus domestica HOM05D005394 ORTHO05D006909 6.3e-60 235.7 225 62.7
GSVIVG01020852001 Vitis vinifera HOM05D005394 ORTHO05D006909 8.3e-60 235.3 225 60.4
MELO3C019674.2 Cucumis melo HOM05D005394 ORTHO05D006909 1.1e-59 235.0 227 61.2
Thecc.04G175300 Theobroma cacao HOM05D005394 ORTHO05D006909 1.1e-59 235.0 228 60.5
Medtr5g091250 Medicago truncatula HOM05D005394 ORTHO05D006909 1.8e-59 234.2 225 61.8
Duzib212G0967 Durio zibethinus HOM05D005394 ORTHO05D006909 4.1e-59 233.0 246 56.9
Prupe.3G175300 Prunus persica HOM05D005394 ORTHO05D006909 4.1e-59 233.0 226 60.2
TWI14G0801 Tripterygium wilfordii HOM05D005394 ORTHO05D006909 4.1e-59 233.0 224 61.2
Sabra02G0047500 Salix brachista HOM05D005394 ORTHO05D006909 5.4e-59 232.6 222 63.1
Gohir.D10G126100 Gossypium hirsutum HOM05D005394 ORTHO05D006909 7.0e-59 232.3 228 60.5
Manes.02G088100 Manihot esculenta HOM05D005394 ORTHO05D006909 1.2e-58 231.5 247 57.1
Sed0013102 Sechium edule HOM05D005394 ORTHO05D006909 1.2e-58 231.5 219 62.1
RcHm_v2.0_Chr2g0151781 Rosa chinensis HOM05D005394 ORTHO05D006909 1.6e-58 231.1 225 60.9
FAN14G2062 Fragaria x ananassa HOM05D005394 ORTHO05D006909 7.7e-58 228.8 225 60.0
MD17G1137000 Malus domestica HOM05D005394 ORTHO05D006909 1.3e-57 228.0 224 60.7
Sed0020842 Sechium edule HOM05D005394 ORTHO05D006909 1.3e-57 228.0 227 59.0
FAN09G4660 Fragaria x ananassa HOM05D005394 ORTHO05D006909 1.7e-57 227.6 225 59.6
FvH4_6g38530 Fragaria vesca HOM05D005394 ORTHO05D006909 2.3e-57 227.3 225 59.6
PGR042G0197 Punica granatum HOM05D005394 ORTHO05D006909 2.9e-57 226.9 219 59.8
LjContig00049g0014840 Lotus japonicus HOM05D005394 ORTHO05D006909 6.5e-57 225.7 203 64.5
QL08p044839 Quercus lobata HOM05D005394 ORTHO05D006909 6.5e-57 225.7 203 66.0
FAN05G5751 Fragaria x ananassa HOM05D005394 ORTHO05D006909 1.1e-56 224.9 225 59.6
Potri.005G203900 Populus trichocarpa HOM05D005394 ORTHO05D006909 2.5e-56 223.8 211 63.5
FAN02G2503 Fragaria x ananassa HOM05D005394 ORTHO05D006909 3.3e-56 223.4 225 58.7
Glyma.14G029500 Glycine max HOM05D005394 ORTHO05D006909 4.2e-56 223.0 201 65.2
HanXRQChr09g0276121 Helianthus annuus HOM05D005394 ORTHO05D006909 4.2e-56 223.0 225 57.8
BcaB03g15148 Brassica carinata HOM05D005394 ORTHO05D006909 7.2e-56 222.2 225 59.1
ECA233G4606 Erigeron canadensis HOM05D005394 ORTHO05D006909 7.2e-56 222.2 243 54.3
HanXRQChr17g0559821 Helianthus annuus HOM05D005394 ORTHO05D006909 7.2e-56 222.2 225 58.2
Nitab4.5_0002209g0020 Nicotiana tabacum HOM05D005394 ORTHO05D006909 7.2e-56 222.2 225 59.6
CiPaw.03G191600 Carya illinoinensis HOM05D005394 ORTHO05D006909 9.5e-56 221.9 196 66.3
HanXRQChr16g0503181 Helianthus annuus HOM05D005394 ORTHO05D006909 1.6e-55 221.1 225 57.3
Nitab4.5_0003104g0050 Nicotiana tabacum HOM05D005394 ORTHO05D006909 1.6e-55 221.1 225 59.1
Solyc10g007720.4 Solanum lycopersicum HOM05D005394 ORTHO05D006909 2.1e-55 220.7 224 59.4
Sopen10g003630 Solanum pennellii HOM05D005394 ORTHO05D006909 2.1e-55 220.7 224 59.4
Phvul.008G193314 Phaseolus vulgaris HOM05D005394 ORTHO05D006909 2.8e-55 220.3 207 63.8
Cc05_g09680 Coffea canephora HOM05D005394 ORTHO05D006909 3.6e-55 219.9 231 59.7
Nn8g41245 Nelumbo nucifera HOM05D005394 ORTHO05D006909 3.6e-55 219.9 226 57.1
Peaxi162Scf00035g02520 Petunia axillaris HOM05D005394 ORTHO05D006909 3.6e-55 219.9 225 59.1
Glyma.02G286300 Glycine max HOM05D005394 ORTHO05D006909 4.7e-55 219.5 201 64.2
CSS0015023 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 1.0e-54 218.4 227 57.3
CSS0042292 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 1.0e-54 218.4 227 57.3
VMungo0647G2040 Vigna mungo HOM05D005394 ORTHO05D006909 1.0e-54 218.4 206 63.6
Sc06g0007690 Simmondsia chinensis HOM05D005394 ORTHO05D006909 1.4e-54 218.0 256 52.7
PGSC0003DMG400021243 Solanum tuberosum HOM05D005394 ORTHO05D006909 1.4e-54 218.0 224 58.5
Potri.002G058300 Populus trichocarpa HOM05D005394 ORTHO05D006909 7.5e-53 212.2 206 63.1
Lsat_1_v5_gn_8_142320 Lactuca sativa HOM05D005394 ORTHO05D006909 9.8e-53 211.8 226 55.8
Dinv07076 Davidia involucrata HOM05D005394 ORTHO05D006909 1.3e-52 211.5 232 55.6
PSO675G3098 Papaver somniferum HOM05D005394 ORTHO05D006909 2.8e-52 210.3 226 55.3
Aqoxy1G01759 Aquilegia oxysepala HOM05D005394 ORTHO05D006909 4.9e-52 209.5 282 47.9
TAR626G0164 Trochodendron aralioides HOM05D005394 ORTHO05D006909 6.3e-52 209.1 226 55.3
PSO541G2917 Papaver somniferum HOM05D005394 ORTHO05D006909 1.1e-51 208.4 226 54.4
CANSAT64G3008 Cannabis sativa HOM05D005394 ORTHO05D006909 4.5e-50 203.0 203 62.1
Eucgr.A02013 Eucalyptus grandis HOM05D005394 ORTHO05D006909 5.9e-50 202.6 204 57.4
Migut.E01770 Erythranthe guttata HOM05D005394 ORTHO05D006909 1.3e-49 201.4 226 54.9
DCAR_009812 Daucus carota HOM05D005394 ORTHO05D006909 1.7e-49 201.1 255 49.0
MBI16_g26174_MAGBIO Magnolia biondii HOM05D005394 ORTHO05D006909 2.3e-49 200.7 227 54.2
SGA_v2.0_scaffold4G02121 Striga asiatica HOM05D005394 ORTHO05D006909 3.8e-49 199.9 226 54.4
MSTRG.15035 Avicennia marina HOM05D005394 ORTHO05D006909 8.6e-49 198.7 225 55.6
Rhsim12G0008000 Rhododendron simsii HOM05D005394 ORTHO05D006909 1.1e-48 198.4 223 56.5
Oeu020932.1 Olea europaea HOM05D005394 ORTHO05D006909 3.3e-48 196.8 227 54.6
MBI10_g36386_MAGBIO Magnolia biondii HOM05D005394 ORTHO05D006909 7.3e-48 195.7 227 52.4
unitig_46.g18287 Utricularia gibba HOM05D005394 ORTHO05D006909 1.6e-47 194.5 247 49.0
EL10Ac9g22847 Beta vulgaris HOM05D005394 ORTHO05D006909 3.6e-47 193.4 259 49.4
SHI02103 Sapria himalayana HOM05D005394 ORTHO05D006909 1.8e-46 191.0 226 51.3
vmacro00998 Vaccinium macrocarpon HOM05D005394 ORTHO05D006909 9.8e-45 185.3 196 60.2
CDE02G3161 Ceratophyllum demersum HOM05D005394 ORTHO05D006909 2.9e-44 183.7 222 50.0
Ah.01g001930 Amaranthus hybridus HOM05D005394 ORTHO05D006909 4.1e-43 179.9 225 51.6
CSS0027861 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 5.4e-43 179.5 234 50.4
SEGI_12117 Sequoiadendron giganteum HOM05D005394 ORTHO05D006909 1.3e-41 174.9 225 48.9
ATR0605G001 Amborella trichopoda HOM05D005394 ORTHO05D006909 1.4e-38 164.9 226 46.0
Pp3c10_16550 Physcomitrium patens HOM05D005394 ORTHO05D006909 2.3e-38 164.1 234 44.0
AUR62015139 Chenopodium quinoa HOM05D005394 ORTHO05D006909 3.1e-38 163.7 182 55.5
AUR62017599 Chenopodium quinoa HOM05D005394 ORTHO05D006909 3.1e-38 163.7 182 55.5
HPP92_002195 Vanilla planifolia HOM05D005394 ORTHO05D006909 4.0e-38 163.3 224 45.1
Pp3c14_13420 Physcomitrium patens HOM05D005394 ORTHO05D006909 6.8e-38 162.5 228 43.4
Thhalv10018283m.g Eutrema salsugineum HOM05D005394 ORTHO05D006909 1.2e-37 161.8 162 59.3
Atru.chr6.2063 Acer truncatum HOM05D005394 ORTHO05D006909 2.6e-37 160.6 168 60.1
SMO266G0070 Selaginella moellendorffii HOM05D005394 ORTHO05D006909 7.5e-37 159.1 309 36.9
Mapoly0082s0010 Marchantia polymorpha HOM05D005394 ORTHO05D006909 6.4e-36 156.0 318 35.8
CBR_g53704 Chara braunii HOM05D005394 ORTHO05D006909 8.6e-33 145.6 228 42.1
Actinidia12538 Actinidia chinensis HOM05D005394 ORTHO05D006909 1.1e-30 138.7 181 53.0
DCAR_032393 Daucus carota HOM05D005394 ORTHO05D011132 1.2e-26 125.2 141 53.9
BcaB01g03482 Brassica carinata HOM05D005394 ORTHO05D006909 1.6e-23 114.8 132 55.3
Lj1A601G23 Lonicera japonica HOM05D005394 ORTHO05D006909 1.6e-23 114.8 131 54.2
Actinidia25071 Actinidia chinensis HOM05D005394 ORTHO05D006909 2.4e-22 110.9 173 46.8
Zm00001eb286850 Zea mays HOM05D005394 ORTHO05D006909 2.4e-22 110.9 198 41.9
Cre17.g721900 Chlamydomonas reinhardtii HOM05D005394 ORTHO05D006909 1.1e-19 102.1 227 35.7
HanXRQChr14g0428721 Helianthus annuus HOM05D005394 ORTHO05D006909 1.4e-19 101.7 126 50.0
PRCOL_00001583 Prasinoderma coloniale HOM05D005394 ORTHO05D006909 7.1e-19 99.4 223 36.3
MCO08G047 Micromonas commoda HOM05D005394 ORTHO05D006909 1.6e-18 98.2 254 32.7
CAN.G2018.3 Capsicum annuum HOM05D005394 ORTHO05D006909 2.7e-18 97.4 52 84.6
QL02p034830 Quercus lobata HOM05D003913 ORTHO05D004803 1.3e-07 62.0 61 52.5


User provided reference genes

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