Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_13390 Corylus avellana HOM05D003420 ORTHO05D003970 1.4e-151 539.7 286 100.0
Haze_13391 Corylus avellana HOM05D003420 ORTHO05D003970 1.1e-44 184.5 108 97.2
Cfa000383 Carpinus fangiana HOM05D003420 ORTHO05D003970 4.4e-12 76.3 43 95.3
Cfa018227 Carpinus fangiana HOM05D003420 ORTHO05D003970 7.5e-12 75.5 40 100.0
Eucgr.F04156 Eucalyptus grandis HOM05D003420 ORTHO05D003970 2.2e-11 73.9 40 97.5
Prupe.4G277400 Prunus persica HOM05D003420 ORTHO05D003970 2.8e-11 73.6 40 95.0
CSS0045751 Camellia sinensis var. sinensis HOM05D003420 ORTHO05D003970 3.7e-11 73.2 41 90.2
Rhsim05G0166700 Rhododendron simsii HOM05D003420 ORTHO05D003970 3.7e-11 73.2 41 90.2
vmacro11080 Vaccinium macrocarpon HOM05D003420 ORTHO05D003970 3.7e-11 73.2 41 90.2
CiPaw.15G007400 Carya illinoinensis HOM05D003420 ORTHO05D003970 4.9e-11 72.8 40 95.0
FvH4_6g24280 Fragaria vesca HOM05D003420 ORTHO05D003970 4.9e-11 72.8 40 95.0
FAN02G2135 Fragaria x ananassa HOM05D003420 ORTHO05D003970 4.9e-11 72.8 40 95.0
FAN05G2825 Fragaria x ananassa HOM05D003420 ORTHO05D003970 4.9e-11 72.8 40 95.0
FAN14G5243 Fragaria x ananassa HOM05D003420 ORTHO05D003970 4.9e-11 72.8 40 95.0
MD14G1071700 Malus domestica HOM05D003420 ORTHO05D003970 4.9e-11 72.8 40 95.0
Manes.18G097100 Manihot esculenta HOM05D003420 ORTHO05D003970 4.9e-11 72.8 40 95.0
THA.LOC104800101 Tarenaya hassleriana HOM05D003420 ORTHO05D003970 4.9e-11 72.8 40 95.0
Actinidia22448 Actinidia chinensis HOM05D003420 ORTHO05D003970 6.3e-11 72.4 41 87.8
MSTRG.963 Avicennia marina HOM05D003420 ORTHO05D003970 6.3e-11 72.4 40 92.5
Potri.019G088100 Populus trichocarpa HOM05D003420 ORTHO05D003970 6.3e-11 72.4 40 92.5
QL02p034947 Quercus lobata HOM05D003420 ORTHO05D003970 6.3e-11 72.4 40 95.0
QL05p025121 Quercus lobata HOM05D003420 ORTHO05D003970 6.3e-11 72.4 40 95.0
QL05p046655 Quercus lobata HOM05D003420 ORTHO05D003970 6.3e-11 72.4 40 95.0
CSS0008854 Camellia sinensis var. sinensis HOM05D003420 ORTHO05D003970 8.3e-11 72.0 41 87.8
MELO3C019945.2 Cucumis melo HOM05D003420 ORTHO05D003970 8.3e-11 72.0 60 65.0
Aa31LG4G8810 Aethionema arabicum HOM05D003420 ORTHO05D003970 1.1e-10 71.6 40 92.5
AL2G31400 Arabidopsis lyrata HOM05D003420 ORTHO05D003970 1.1e-10 71.6 40 92.5
AT1G71820 Arabidopsis thaliana HOM05D003420 ORTHO05D003970 1.1e-10 71.6 40 92.5
BcaB03g15619 Brassica carinata HOM05D003420 ORTHO05D003970 1.1e-10 71.6 40 92.5
BcaC08g45755 Brassica carinata HOM05D003420 ORTHO05D003970 1.1e-10 71.6 40 92.5
A07p30580 Brassica napus HOM05D003420 ORTHO05D003970 1.1e-10 71.6 40 92.5
C06p35360 Brassica napus HOM05D003420 ORTHO05D003970 1.1e-10 71.6 40 92.5
BolC6t38641H Brassica oleracea HOM05D003420 ORTHO05D003970 1.1e-10 71.6 40 92.5
BraA07t30693Z Brassica rapa HOM05D003420 ORTHO05D003970 1.1e-10 71.6 40 92.5
Carub.0002s1858 Capsella rubella HOM05D003420 ORTHO05D003970 1.1e-10 71.6 40 92.5
CARHR290960 Cardamine hirsuta HOM05D003420 ORTHO05D003970 1.1e-10 71.6 40 92.5
Cc10_g06190 Coffea canephora HOM05D003420 ORTHO05D003970 1.1e-10 71.6 40 92.5
Migut.C00172 Erythranthe guttata HOM05D003420 ORTHO05D003970 1.1e-10 71.6 40 92.5
Thhalv10018180m.g Eutrema salsugineum HOM05D003420 ORTHO05D003970 1.1e-10 71.6 40 92.5
Oeu027630.1 Olea europaea HOM05D003420 ORTHO05D003970 1.1e-10 71.6 40 92.5
Oeu042182.1 Olea europaea HOM05D003420 ORTHO05D003970 1.1e-10 71.6 40 92.5
Peaxi162Scf00226g00925 Petunia axillaris HOM05D003420 ORTHO05D003970 1.1e-10 71.6 40 92.5
PGR102G1634 Punica granatum HOM05D003420 ORTHO05D003970 1.1e-10 71.6 40 92.5
RcHm_v2.0_Chr3g0482841 Rosa chinensis HOM05D003420 ORTHO05D003970 1.1e-10 71.6 40 92.5
Sp5g26850 Schrenkiella parvula HOM05D003420 ORTHO05D003970 1.1e-10 71.6 40 92.5
SpUn0020_0120 Schrenkiella parvula HOM05D003420 ORTHO05D003970 1.1e-10 71.6 40 92.5
Actinidia06762 Actinidia chinensis HOM05D003420 ORTHO05D003970 1.4e-10 71.2 41 85.4
CANSAT25G1859 Cannabis sativa HOM05D003420 ORTHO05D003970 1.4e-10 71.2 40 92.5
Lj4g0005231 Lotus japonicus HOM05D003420 ORTHO05D003970 1.4e-10 71.2 43 86.0
Manes.02G187400 Manihot esculenta HOM05D003420 ORTHO05D003970 1.4e-10 71.2 41 87.8
Sabra13G0099500 Salix brachista HOM05D003420 ORTHO05D003970 1.8e-10 70.9 40 90.0
SHI09125 Sapria himalayana HOM05D003420 ORTHO05D003970 1.8e-10 70.9 40 92.5
arahy.Tifrunner.gnm1.ann1.GQ31QR Arachis hypogaea HOM05D003420 ORTHO05D003970 2.4e-10 70.5 40 90.0
arahy.Tifrunner.gnm1.ann1.PV9APJ Arachis hypogaea HOM05D003420 ORTHO05D003970 2.4e-10 70.5 40 90.0
BcaC08g46613 Brassica carinata HOM05D003420 ORTHO05D003970 2.4e-10 70.5 40 90.0
A07p37970 Brassica napus HOM05D003420 ORTHO05D003970 2.4e-10 70.5 40 90.0
C06p45890 Brassica napus HOM05D003420 ORTHO05D003970 2.4e-10 70.5 40 90.0
BolC6t39641H Brassica oleracea HOM05D003420 ORTHO05D003970 2.4e-10 70.5 40 90.0
BraA07t31362Z Brassica rapa HOM05D003420 ORTHO05D003970 2.4e-10 70.5 40 90.0
CAN.G1010.15 Capsicum annuum HOM05D003420 ORTHO05D003970 2.4e-10 70.5 40 90.0
CiPaw.15G007500 Carya illinoinensis HOM05D003420 ORTHO05D003970 2.4e-10 70.5 40 92.5
Glyma.01G140600 Glycine max HOM05D003420 ORTHO05D003970 2.4e-10 70.5 40 90.0
Glyma.03G026900 Glycine max HOM05D003420 ORTHO05D003970 2.4e-10 70.5 40 90.0
Lj4C710T4 Lonicera japonica HOM05D003420 ORTHO05D003970 2.4e-10 70.5 40 87.5
Lalb_Chr01g0009891 Lupinus albus HOM05D003420 ORTHO05D003970 2.4e-10 70.5 40 90.0
Lalb_Chr19g0129871 Lupinus albus HOM05D003420 ORTHO05D003970 2.4e-10 70.5 40 90.0
Medtr4g024570 Medicago truncatula HOM05D003420 ORTHO05D003970 2.4e-10 70.5 40 90.0
Nitab4.5_0001307g0060 Nicotiana tabacum HOM05D003420 ORTHO05D003970 2.4e-10 70.5 40 90.0
Nitab4.5_0002608g0090 Nicotiana tabacum HOM05D003420 ORTHO05D003970 2.4e-10 70.5 40 90.0
Sc02g0003530 Simmondsia chinensis HOM05D003420 ORTHO05D003970 2.4e-10 70.5 40 90.0
SGA_v2.0_scaffold48G18027 Striga asiatica HOM05D003420 ORTHO05D003970 2.4e-10 70.5 40 90.0
TWI32G0430 Tripterygium wilfordii HOM05D003420 ORTHO05D003970 2.4e-10 70.5 40 90.0
unitig_46.g18008 Utricularia gibba HOM05D003420 ORTHO05D003970 2.4e-10 70.5 40 90.0
Cpa.g.sc88.64 Carica papaya HOM05D003420 ORTHO05D003970 3.1e-10 70.1 40 90.0
ClCG08G008720 Citrullus lanatus HOM05D003420 ORTHO05D003970 4.1e-10 69.7 40 87.5
CsaV3_6G004750 Cucumis sativus L. HOM05D003420 ORTHO05D003970 4.1e-10 69.7 40 87.5
ECA246G4467 Erigeron canadensis HOM05D003420 ORTHO05D003970 4.1e-10 69.7 40 90.0
Hma1.2p1_0276F.1_g111220 Hydrangea macrophylla HOM05D003420 ORTHO05D003970 4.1e-10 69.7 40 87.5
Hma1.2p1_1261F.1_g271140 Hydrangea macrophylla HOM05D003420 ORTHO05D003970 4.1e-10 69.7 40 87.5
Lsat_1_v5_gn_6_100921 Lactuca sativa HOM05D003420 ORTHO05D003970 4.1e-10 69.7 40 90.0
Phvul.010G082700 Phaseolus vulgaris HOM05D003420 ORTHO05D003970 4.1e-10 69.7 40 87.5
Sabra19G0098400 Salix brachista HOM05D003420 ORTHO05D003970 4.1e-10 69.7 40 87.5
Sed0005269 Sechium edule HOM05D003420 ORTHO05D003970 4.1e-10 69.7 40 87.5
GSVIVG01022862001 Vitis vinifera HOM05D003420 ORTHO05D003970 4.1e-10 69.7 40 87.5
GSVIVG01038535001 Vitis vinifera HOM05D003420 ORTHO05D003970 4.1e-10 69.7 40 87.5
Ah.09g232700 Amaranthus hybridus HOM05D003420 ORTHO05D003970 5.4e-10 69.3 40 87.5
HanXRQChr10g0278771 Helianthus annuus HOM05D003420 ORTHO05D003970 5.4e-10 69.3 44 84.1
Psat7g231160 Pisum sativum HOM05D003420 ORTHO05D003970 5.4e-10 69.3 43 81.4
Solyc04g072290.3 Solanum lycopersicum HOM05D003420 ORTHO05D003970 5.4e-10 69.3 40 87.5
Sopen04g028480 Solanum pennellii HOM05D003420 ORTHO05D003970 5.4e-10 69.3 40 87.5
COL.COLO4_12104 Corchorus olitorius HOM05D003420 ORTHO05D003970 7.0e-10 68.9 40 87.5
Duzib187G1187 Durio zibethinus HOM05D003420 ORTHO05D003970 7.0e-10 68.9 40 87.5
Thecc.01G140700 Theobroma cacao HOM05D003420 ORTHO05D003970 7.0e-10 68.9 40 87.5
DCAR_013169 Daucus carota HOM05D003420 ORTHO05D003970 9.2e-10 68.6 40 87.5
Os02g0749500 Oryza sativa ssp. japonica HOM05D003420 ORTHO05D003970 9.2e-10 68.6 40 85.0
TAR625G1262 Trochodendron aralioides HOM05D003420 ORTHO05D003970 9.2e-10 68.6 43 83.7
VMungo0331G1041 Vigna mungo HOM05D003420 ORTHO05D003970 9.2e-10 68.6 43 81.4
GSVIVG01022846001 Vitis vinifera HOM05D003420 ORTHO05D003970 9.2e-10 68.6 40 87.5
EL10Ac8g19742 Beta vulgaris HOM05D003420 ORTHO05D003970 1.2e-09 68.2 40 85.0
AUR62027528 Chenopodium quinoa HOM05D003420 ORTHO05D003970 1.2e-09 68.2 40 85.0
AUR62030227 Chenopodium quinoa HOM05D003420 ORTHO05D003970 1.2e-09 68.2 40 85.0
Gohir.A10G068000 Gossypium hirsutum HOM05D003420 ORTHO05D003970 1.2e-09 68.2 40 85.0
Gohir.D10G107600 Gossypium hirsutum HOM05D003420 ORTHO05D003970 1.2e-09 68.2 40 85.0
Gorai.011G117900 Gossypium raimondii HOM05D003420 ORTHO05D003970 1.2e-09 68.2 40 85.0
Aqoxy2G01386 Aquilegia oxysepala HOM05D003420 ORTHO05D003970 1.6e-09 67.8 43 83.7
Ca_19960_v3 Cicer arietinum L. HOM05D003420 ORTHO05D003970 1.6e-09 67.8 40 87.5
Nn8g40471 Nelumbo nucifera HOM05D003420 ORTHO05D003970 1.6e-09 67.8 40 82.5
Potri.013G117400 Populus trichocarpa HOM05D003420 ORTHO05D003970 1.6e-09 67.8 40 85.0
TWI32G0245 Tripterygium wilfordii HOM05D003420 ORTHO05D003970 1.6e-09 67.8 40 87.5
ATR0815G027 Amborella trichopoda HOM05D003420 ORTHO05D003970 2.0e-09 67.4 40 82.5
Sabra19G0101900 Salix brachista HOM05D003420 ORTHO05D003970 2.0e-09 67.4 40 85.0
TPR.G31331 Trifolium pratense HOM05D003420 ORTHO05D003970 2.0e-09 67.4 40 85.0
Atru.chr13.1894 Acer truncatum HOM05D003420 ORTHO05D003970 4.5e-09 66.2 40 87.5
HanXRQChr10g0278751 Helianthus annuus HOM05D003420 ORTHO05D003970 4.5e-09 66.2 43 79.1
MBI05_g36581_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 5.9e-09 65.9 49 69.4
PSO210G4421 Papaver somniferum HOM05D003420 ORTHO05D003970 5.9e-09 65.9 43 81.4
PSO447G0346 Papaver somniferum HOM05D003420 ORTHO05D003970 5.9e-09 65.9 43 81.4
MBI05_g36592_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 7.8e-09 65.5 40 80.0
MBI05_g43692_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 7.8e-09 65.5 40 80.0
HPP92_002340 Vanilla planifolia HOM05D003420 ORTHO05D003970 7.8e-09 65.5 40 82.5
ClCG08G008060 Citrullus lanatus HOM05D003420 ORTHO05D003970 1.3e-08 64.7 44 79.5
SEGI_15136 Sequoiadendron giganteum HOM05D003420 ORTHO05D003970 1.3e-08 64.7 40 85.0
Migut.C00145 Erythranthe guttata HOM05D003420 ORTHO05D003970 2.3e-08 63.9 40 82.5
vmacro03706 Vaccinium macrocarpon HOM05D003420 ORTHO05D003970 2.3e-08 63.9 50 68.0
DCAR_009600 Daucus carota HOM05D003420 ORTHO05D003970 5.0e-08 62.8 42 78.6
MELO3C030259.2 Cucumis melo HOM05D003420 ORTHO05D003970 6.6e-08 62.4 45 73.3
ATR0824G022 Amborella trichopoda HOM05D003420 ORTHO05D003970 8.6e-08 62.0 40 77.5
MBI02_g35947_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 1.5e-07 61.2 40 75.0
MBI02_g44124_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 1.5e-07 61.2 40 75.0
Ciclev10000376m.g Citrus clementina HOM05D003420 ORTHO05D003970 4.3e-07 59.7 40 77.5
Ciclev10000395m.g Citrus clementina HOM05D003420 ORTHO05D003970 4.3e-07 59.7 40 77.5
Atru.chr6.1390 Acer truncatum HOM05D003420 ORTHO05D003970 7.3e-07 58.9 40 75.0
Atru.chr7.57 Acer truncatum HOM05D003420 ORTHO05D003970 9.5e-07 58.5 40 72.5
HanXRQChr01g0002061 Helianthus annuus HOM05D003420 ORTHO05D003970 6.1e-06 55.8 40 72.5


User provided reference genes

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