Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_13350 Corylus avellana HOM05D006652 ORTHO05D008645 6.1e-55 217.2 109 100.0
QL08p041412 Quercus lobata HOM05D006652 ORTHO05D008645 3.1e-43 178.3 94 90.4
Actinidia39342 Actinidia chinensis HOM05D006652 ORTHO05D008645 5.3e-43 177.6 94 91.5
CSS0047332 Camellia sinensis var. sinensis HOM05D006652 ORTHO05D008645 2.0e-42 175.6 94 90.4
vmacro09218 Vaccinium macrocarpon HOM05D006652 ORTHO05D008645 5.9e-42 174.1 94 91.5
Lj8C103T10 Lonicera japonica HOM05D006652 ORTHO05D008645 1.3e-41 172.9 94 89.4
Hma1.2p1_0166F.1_g073540 Hydrangea macrophylla HOM05D006652 ORTHO05D008645 2.2e-41 172.2 93 89.2
Rhsim04G0074100 Rhododendron simsii HOM05D006652 ORTHO05D008645 2.9e-41 171.8 94 89.4
Medtr4g079750 Medicago truncatula HOM05D006652 ORTHO05D008645 1.5e-40 169.5 92 88.0
Nitab4.5_0000822g0100 Nicotiana tabacum HOM05D006652 ORTHO05D008645 2.5e-40 168.7 93 84.9
SGA_v2.0_scaffold109G31132 Striga asiatica HOM05D006652 ORTHO05D008645 4.2e-40 167.9 92 88.0
arahy.Tifrunner.gnm1.ann1.KP1SVS Arachis hypogaea HOM05D006652 ORTHO05D008645 5.5e-40 167.5 92 87.0
Dinv08786 Davidia involucrata HOM05D006652 ORTHO05D008645 5.5e-40 167.5 94 83.0
Migut.H02157 Erythranthe guttata HOM05D006652 ORTHO05D008645 9.4e-40 166.8 95 84.2
Lj3g0009013 Lotus japonicus HOM05D006652 ORTHO05D008645 9.4e-40 166.8 93 86.0
TAR629G0548 Trochodendron aralioides HOM05D006652 ORTHO05D008645 9.4e-40 166.8 94 84.0
CAN.G782.5 Capsicum annuum HOM05D006652 ORTHO05D008645 1.6e-39 166.0 93 81.7
Nn1g04382 Nelumbo nucifera HOM05D006652 ORTHO05D008645 1.6e-39 166.0 93 84.9
Os10g0181600 Oryza sativa ssp. japonica HOM05D006652 ORTHO05D008645 1.6e-39 166.0 92 84.8
Solyc10g008020.3 Solanum lycopersicum HOM05D006652 ORTHO05D008645 1.6e-39 166.0 93 82.8
Sopen10g003890 Solanum pennellii HOM05D006652 ORTHO05D008645 1.6e-39 166.0 93 82.8
PGSC0003DMG400010544 Solanum tuberosum HOM05D006652 ORTHO05D008645 2.1e-39 165.6 93 81.7
arahy.Tifrunner.gnm1.ann1.5ZDL5Q Arachis hypogaea HOM05D006652 ORTHO05D008645 2.7e-39 165.2 92 85.9
Ca_18890_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 3.6e-39 164.9 92 85.9
Gohir.A10G153800 Gossypium hirsutum HOM05D006652 ORTHO05D008645 3.6e-39 164.9 93 82.8
Gohir.D10G112300 Gossypium hirsutum HOM05D006652 ORTHO05D008645 3.6e-39 164.9 93 82.8
Gorai.011G124200 Gossypium raimondii HOM05D006652 ORTHO05D008645 3.6e-39 164.9 93 82.8
Lsat_1_v5_gn_8_140221 Lactuca sativa HOM05D006652 ORTHO05D008645 3.6e-39 164.9 94 84.0
GSVIVG01020686001 Vitis vinifera HOM05D006652 ORTHO05D008645 3.6e-39 164.9 93 84.9
AUR62038922 Chenopodium quinoa HOM05D006652 ORTHO05D008645 4.7e-39 164.5 93 83.9
Lalb_Chr19g0134921 Lupinus albus HOM05D006652 ORTHO05D008645 4.7e-39 164.5 92 83.7
MSTRG.14312 Avicennia marina HOM05D006652 ORTHO05D008645 6.1e-39 164.1 93 83.9
Zm00001eb223890 Zea mays HOM05D006652 ORTHO05D008645 6.1e-39 164.1 93 81.7
Aqoxy4G00418 Aquilegia oxysepala HOM05D006652 ORTHO05D008645 8.0e-39 163.7 94 83.0
ECA234G1589 Erigeron canadensis HOM05D006652 ORTHO05D008645 8.0e-39 163.7 94 84.0
HanXRQChr17g0558041 Helianthus annuus HOM05D006652 ORTHO05D008645 8.0e-39 163.7 94 80.9
Hund07829 Selenicereus undatus HOM05D006652 ORTHO05D008645 1.0e-38 163.3 93 81.7
EL10Ac9g20915 Beta vulgaris HOM05D006652 ORTHO05D008645 1.4e-38 162.9 94 81.9
Peaxi162Scf00241g00812 Petunia axillaris HOM05D006652 ORTHO05D008645 1.4e-38 162.9 93 79.6
CiPaw.03G187000 Carya illinoinensis HOM05D006652 ORTHO05D008645 5.2e-38 161.0 102 80.4
unitig_21.g20276 Utricularia gibba HOM05D006652 ORTHO05D008645 5.2e-38 161.0 92 84.8
Atru.chr6.2810_Atru.chr6.2811 Acer truncatum HOM05D006652 ORTHO05D008645 8.8e-38 160.2 93 80.6
MBI11_g14404_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 8.8e-38 160.2 93 83.9
Thecc.01G148700 Theobroma cacao HOM05D006652 ORTHO05D008645 1.2e-37 159.8 93 80.6
AUR62038997 Chenopodium quinoa HOM05D006652 ORTHO05D008645 1.5e-37 159.5 106 75.5
Glyma.12G122700 Glycine max HOM05D006652 ORTHO05D008645 2.0e-37 159.1 93 82.8
Ciclev10015734m.g Citrus clementina HOM05D006652 ORTHO05D008645 5.7e-37 157.5 94 79.8
SalBow7G3656 Salvia bowleyana HOM05D006652 ORTHO05D008645 5.7e-37 157.5 92 81.5
Phvul.011G134400 Phaseolus vulgaris HOM05D006652 ORTHO05D008645 9.7e-37 156.8 93 80.6
Glyma.06G283400 Glycine max HOM05D006652 ORTHO05D008645 1.3e-36 156.4 93 79.6
Potri.019G089700 Populus trichocarpa HOM05D006652 ORTHO05D008645 1.3e-36 156.4 92 80.4
Sabra19G0100100 Salix brachista HOM05D006652 ORTHO05D008645 1.3e-36 156.4 92 78.3
ATR0661G163 Amborella trichopoda HOM05D006652 ORTHO05D008645 1.7e-36 156.0 92 78.3
Sabra19G0103300 Salix brachista HOM05D006652 ORTHO05D008645 2.2e-36 155.6 92 78.3
Duzib187G0644 Durio zibethinus HOM05D006652 ORTHO05D008645 2.8e-36 155.2 93 78.5
VMungo1127G0176 Vigna mungo HOM05D006652 ORTHO05D008645 3.7e-36 154.8 93 79.6
COL.COLO4_33547 Corchorus olitorius HOM05D006652 ORTHO05D008645 6.3e-36 154.1 93 76.3
Eucgr.K01102 Eucalyptus grandis HOM05D006652 ORTHO05D008645 7.0e-35 150.6 101 69.3
Nitab4.5_0008146g0020 Nicotiana tabacum HOM05D006652 ORTHO05D008645 4.5e-34 147.9 93 76.3
Glyma.06G283600 Glycine max HOM05D006652 ORTHO05D008645 5.9e-34 147.5 92 73.9
CsaV3_6G018460 Cucumis sativus L. HOM05D006652 ORTHO05D008645 1.0e-33 146.7 93 73.1
PGR142G2816 Punica granatum HOM05D006652 ORTHO05D008645 1.5e-32 142.9 93 73.1
CDE11G0921 Ceratophyllum demersum HOM05D006652 ORTHO05D008645 4.2e-32 141.4 93 68.8
Sed0018596 Sechium edule HOM05D006652 ORTHO05D008645 7.2e-32 140.6 92 71.7
SMO334G0043 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 4.7e-31 137.9 93 68.8
Glyma.06G283500 Glycine max HOM05D006652 ORTHO05D008645 6.1e-31 137.5 93 75.3
Pp3c3_7460 Physcomitrium patens HOM05D006652 ORTHO05D008645 1.5e-29 132.9 93 63.4
TPR.G21859 Trifolium pratense HOM05D006652 ORTHO05D008645 5.7e-29 131.0 125 56.0
arahy.Tifrunner.gnm1.ann1.MYHL2J Arachis hypogaea HOM05D006652 ORTHO05D008645 8.3e-28 127.1 92 69.6
AagrBONN_evm.TU.Sc2ySwM_228.444 Anthoceros agrestis HOM05D006652 ORTHO05D008645 4.5e-26 121.3 88 64.8
Mapoly0061s0036 Marchantia polymorpha HOM05D006652 ORTHO05D008645 1.9e-24 115.9 91 59.3
DCAR_013062 Daucus carota HOM05D006652 ORTHO05D008645 5.5e-24 114.4 61 90.2
PRCOL_00002204 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 9.5e-24 113.6 89 57.3
MCO11G400 Micromonas commoda HOM05D006652 ORTHO05D008645 4.0e-22 108.2 92 54.3
Glyma.12G122501 Glycine max HOM05D006652 ORTHO05D008645 6.8e-22 107.5 82 65.9
Cc05_g08180 Coffea canephora HOM05D006652 ORTHO05D008645 2.8e-20 102.1 55 85.5
Cre03.g200350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 1.4e-19 99.8 93 50.5
Cc05_g08150 Coffea canephora HOM05D006652 ORTHO05D008645 1.4e-19 99.8 55 83.6
Mapoly0285s0004 Marchantia polymorpha HOM05D006652 ORTHO05D008645 2.4e-19 99.0 91 53.8
CBR_g20426 Chara braunii HOM05D006652 ORTHO05D008645 7.0e-19 97.4 92 52.2
CBR_g20425 Chara braunii HOM05D006652 ORTHO05D008645 2.3e-17 92.4 91 48.4
ClCG02G017930 Citrullus lanatus HOM05D006652 ORTHO05D008645 3.6e-15 85.1 54 75.9
Cre06.g259401 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 8.0e-15 84.0 91 42.9
MCO08G076 Micromonas commoda HOM05D006652 ORTHO05D008645 3.0e-14 82.0 94 40.4
CBR_g34298 Chara braunii HOM05D006652 ORTHO05D008645 1.2e-13 80.1 91 42.9
PRCOL_00006996 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 2.2e-12 75.9 94 42.6
Cc05_g08160 Coffea canephora HOM05D006652 ORTHO05D008645 4.9e-12 74.7 45 77.8
Cc05_g08190 Coffea canephora HOM05D006652 ORTHO05D008645 6.4e-12 74.3 45 77.8
TWI59G0297 Tripterygium wilfordii HOM05D006652 ORTHO05D008645 8.3e-12 73.9 38 84.2
Manes.13G137800 Manihot esculenta HOM05D006652 ORTHO05D008645 5.4e-11 71.2 38 78.9
Mapoly0050s0024 Marchantia polymorpha HOM05D006652 ORTHO05D008645 1.2e-10 70.1 91 38.5
TPR.G21704 Trifolium pratense HOM05D006652 ORTHO05D008645 1.6e-10 69.7 51 62.7
Pp3c17_23540 Physcomitrium patens HOM05D006652 ORTHO05D008645 2.0e-10 69.3 91 37.4
AagrBONN_evm.TU.Sc2ySwM_117.2543 Anthoceros agrestis HOM05D006652 ORTHO05D008645 3.9e-09 65.1 91 36.3
MBI11_g19676_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 5.0e-09 64.7 39 76.9
SMO118G0546 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 5.0e-09 64.7 91 36.3
Psat7g166280 Pisum sativum HOM05D006652 ORTHO05D008645 2.5e-08 62.4 31 87.1
SEGI_35274 Sequoiadendron giganteum HOM05D006652 ORTHO05D008645 2.5e-08 62.4 96 33.3
PGR142G0648 Punica granatum HOM05D006652 ORTHO05D008645 2.8e-07 58.9 39 64.1
Zm00001eb127120 Zea mays HOM05D006652 ORTHO05D008645 3.6e-07 58.5 31 80.6
Zm00001eb155780 Zea mays HOM05D006652 ORTHO05D008645 3.6e-07 58.5 31 80.6
Zm00001eb202810 Zea mays HOM05D006652 ORTHO05D008645 3.6e-07 58.5 31 80.6
Zm00001eb307930 Zea mays HOM05D006652 ORTHO05D008645 8.0e-07 57.4 31 77.4
Zm00001eb272210 Zea mays HOM05D006652 ORTHO05D008645 8.9e-06 53.9 30 76.7


User provided reference genes

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