Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_13304 Corylus avellana HOM05D000211 ORTHO05D002682 1.5e-153 546.2 280 100.0
Cfa014689 Carpinus fangiana HOM05D000211 ORTHO05D002682 2.3e-53 213.4 217 61.3
CiPaw.03G183700 Carya illinoinensis HOM05D000211 ORTHO05D002682 2.3e-29 133.7 216 43.5
MD02G1242400 Malus domestica HOM05D000211 ORTHO05D002682 1.2e-17 94.7 204 34.3
FvH4_6g26960 Fragaria vesca HOM05D000211 ORTHO05D002682 3.4e-17 93.2 211 36.5
Potri.013G124000 Populus trichocarpa HOM05D000211 ORTHO05D002682 4.4e-17 92.8 90 52.2
RcHm_v2.0_Chr2g0128801 Rosa chinensis HOM05D000211 ORTHO05D002682 9.9e-17 91.7 211 35.1
Atru.chr6.2841 Acer truncatum HOM05D000211 ORTHO05D002682 1.4e-15 87.8 59 66.1
GSVIVG01020655001 Vitis vinifera HOM05D000211 ORTHO05D002682 5.4e-15 85.9 86 48.8
Ciclev10016674m.g Citrus clementina HOM05D000211 ORTHO05D002682 1.2e-14 84.7 103 45.6
Gohir.A12G090700 Gossypium hirsutum HOM05D000211 ORTHO05D002682 1.6e-14 84.3 90 53.3
Rhsim04G0072500 Rhododendron simsii HOM05D000211 ORTHO05D002682 2.7e-14 83.6 87 51.7
TAR626G1500 Trochodendron aralioides HOM05D000211 ORTHO05D002682 4.6e-14 82.8 197 33.0
Potri.019G092100 Populus trichocarpa HOM05D000211 ORTHO05D002682 6.0e-14 82.4 86 51.2
Gorai.008G097900 Gossypium raimondii HOM05D000211 ORTHO05D002682 7.8e-14 82.0 90 51.1
THA.LOC104802850 Tarenaya hassleriana HOM05D000211 ORTHO05D002682 7.8e-14 82.0 205 30.2
Prupe.3G125900 Prunus persica HOM05D000211 ORTHO05D002682 2.3e-13 80.5 181 32.6
MELO3C018846.2 Cucumis melo HOM05D000211 ORTHO05D002682 3.9e-13 79.7 115 45.2
Eucgr.K01083 Eucalyptus grandis HOM05D000211 ORTHO05D002682 5.1e-13 79.3 203 31.0
Gohir.D12G087900 Gossypium hirsutum HOM05D000211 ORTHO05D002682 3.3e-12 76.6 93 49.5
DCAR_010696 Daucus carota HOM05D000211 ORTHO05D002682 4.3e-12 76.3 93 45.2
Thecc.01G240600 Theobroma cacao HOM05D000211 ORTHO05D002682 4.3e-12 76.3 91 48.4
Hma1.2p1_0002F.1_g002490 Hydrangea macrophylla HOM05D000211 ORTHO05D002682 5.6e-12 75.9 86 46.5
ClCG02G002220 Citrullus lanatus HOM05D000211 ORTHO05D002682 9.6e-12 75.1 95 45.3
FAN09G0909 Fragaria x ananassa HOM05D000211 ORTHO05D002682 9.6e-12 75.1 174 33.9
TWI23G0737 Tripterygium wilfordii HOM05D000211 ORTHO05D002682 9.6e-12 75.1 53 58.5
CANSAT01G1146 Cannabis sativa HOM05D000211 ORTHO05D002682 1.6e-11 74.3 93 48.4
Manes.13G139800 Manihot esculenta HOM05D000211 ORTHO05D002682 2.1e-11 73.9 86 45.3
Dinv19983 Davidia involucrata HOM05D000211 ORTHO05D002682 2.8e-11 73.6 175 33.7
FAN02G3414 Fragaria x ananassa HOM05D000211 ORTHO05D002682 3.6e-11 73.2 176 34.7
FAN05G3686 Fragaria x ananassa HOM05D005675 ORTHO05D006884 3.6e-11 73.2 53 56.6
PSO832G1085 Papaver somniferum HOM05D000211 ORTHO05D002682 3.6e-11 73.2 192 31.8
ECA234G0464 Erigeron canadensis HOM05D000211 ORTHO05D002682 4.8e-11 72.8 89 48.3
FAN14G1312 Fragaria x ananassa HOM05D000211 ORTHO05D002682 4.8e-11 72.8 180 33.3
Medtr4g079430 Medicago truncatula HOM05D000211 ORTHO05D002682 4.8e-11 72.8 88 44.3
Actinidia30447 Actinidia chinensis HOM05D000211 ORTHO05D002682 1.1e-10 71.6 90 46.7
PSO210G5077 Papaver somniferum HOM05D000211 ORTHO05D002682 1.1e-10 71.6 202 31.2
Cpa.g.sc209.5 Carica papaya HOM05D000211 ORTHO05D002682 1.4e-10 71.2 94 42.6
ClCG00G001860 Citrullus lanatus HOM05D000211 ORTHO05D002682 1.4e-10 71.2 92 44.6
ClCG02G002230 Citrullus lanatus HOM05D000211 ORTHO05D002682 1.4e-10 71.2 92 44.6
HanXRQChr17g0565291 Helianthus annuus HOM05D000211 ORTHO05D002682 1.8e-10 70.9 71 50.7
Nitab4.5_0002645g0050 Nicotiana tabacum HOM05D000211 ORTHO05D002682 1.8e-10 70.9 90 40.0
vmacro09234 Vaccinium macrocarpon HOM05D000211 ORTHO05D002682 3.1e-10 70.1 90 47.8
PGR142G1556 Punica granatum HOM05D000211 ORTHO05D002682 4.0e-10 69.7 90 44.4
Sed0019986 Sechium edule HOM05D000211 ORTHO05D002682 5.3e-10 69.3 92 44.6
Lalb_Chr03g0029781 Lupinus albus HOM05D000211 ORTHO05D002682 6.9e-10 68.9 199 30.2
MSTRG.15116 Avicennia marina HOM05D000211 ORTHO05D002682 1.2e-09 68.2 91 42.9
MBI07_g06438_MAGBIO Magnolia biondii HOM05D000211 ORTHO05D002682 1.2e-09 68.2 84 40.5
Aa31LG1G24260 Aethionema arabicum HOM05D000211 ORTHO05D002682 1.5e-09 67.8 92 42.4
CAN.G782.13 Capsicum annuum HOM05D000211 ORTHO05D002682 2.6e-09 67.0 91 38.5
CsaV3_7G003280 Cucumis sativus L. HOM05D000211 ORTHO05D002682 2.6e-09 67.0 92 44.6
Peaxi162Scf00241g01212 Petunia axillaris HOM05D000211 ORTHO05D002682 3.4e-09 66.6 93 44.1
TWI14G0084 Tripterygium wilfordii HOM05D000211 ORTHO05D002682 4.4e-09 66.2 53 52.8
Oeu031085.1 Olea europaea HOM05D000211 ORTHO05D002682 5.8e-09 65.9 89 42.7
TPR.G20763 Trifolium pratense HOM05D000211 ORTHO05D002682 5.8e-09 65.9 92 43.5
Cc05_g07970 Coffea canephora HOM05D000211 ORTHO05D002682 1.3e-08 64.7 89 43.8
Lsat_1_v5_gn_4_28361 Lactuca sativa HOM05D000211 ORTHO05D002682 1.3e-08 64.7 92 44.6
Lj3g0007969 Lotus japonicus HOM05D000211 ORTHO05D002682 2.2e-08 63.9 214 31.3
Solyc10g008100.3 Solanum lycopersicum HOM05D000211 ORTHO05D002682 2.2e-08 63.9 91 38.5
Psat7g166680 Pisum sativum HOM05D000211 ORTHO05D002682 2.9e-08 63.5 200 31.0
Thhalv10017307m.g Eutrema salsugineum HOM05D000211 ORTHO05D002682 3.8e-08 63.2 93 39.8
C04p03560 Brassica napus HOM05D000211 ORTHO05D002682 4.9e-08 62.8 94 40.4
BraA05t19284Z Brassica rapa HOM05D000211 ORTHO05D002682 4.9e-08 62.8 94 40.4
AL4G40810 Arabidopsis lyrata HOM05D000211 ORTHO05D002682 6.4e-08 62.4 92 35.9
AL409U10010 Arabidopsis lyrata HOM05D000211 ORTHO05D002682 8.4e-08 62.0 92 38.0
CARHR137440 Cardamine hirsuta HOM05D000211 ORTHO05D002682 8.4e-08 62.0 93 36.6
arahy.Tifrunner.gnm1.ann1.GTVL13 Arachis hypogaea HOM05D000211 ORTHO05D002682 1.9e-07 60.8 197 32.0
BolC4t21991H Brassica oleracea HOM05D000211 ORTHO05D002682 1.9e-07 60.8 93 38.7
Carub.0004s2479 Capsella rubella HOM05D000211 ORTHO05D002682 1.9e-07 60.8 91 40.7
Lj8A105T41 Lonicera japonica HOM05D000211 ORTHO05D002682 1.9e-07 60.8 57 47.4
PGSC0003DMG400010561 Solanum tuberosum HOM05D000211 ORTHO05D002682 2.4e-07 60.5 90 38.9
A05p02930 Brassica napus HOM05D000211 ORTHO05D002682 3.2e-07 60.1 94 39.4
Sopen10g003970 Solanum pennellii HOM05D000211 ORTHO05D002682 5.4e-07 59.3 91 36.3
arahy.Tifrunner.gnm1.ann1.45LUS5 Arachis hypogaea HOM05D000211 ORTHO05D002682 9.3e-07 58.5 197 29.9
Actinidia39336 Actinidia chinensis HOM05D000211 ORTHO05D002682 1.2e-06 58.2 90 43.3
AT2G42390 Arabidopsis thaliana HOM05D000211 ORTHO05D002682 1.6e-06 57.8 92 38.0
Sp4g24540 Schrenkiella parvula HOM05D000211 ORTHO05D002682 1.6e-06 57.8 204 27.5
arahy.Tifrunner.gnm1.ann1.ZBAE2G Arachis hypogaea HOM05D000211 ORTHO05D002682 4.6e-06 56.2 205 30.7
Migut.M00194 Erythranthe guttata HOM05D000211 ORTHO05D002682 4.6e-06 56.2 88 39.8
Nitab4.5_0002196g0040 Nicotiana tabacum HOM05D000211 ORTHO05D002682 4.6e-06 56.2 58 43.1


User provided reference genes

Program Settings