Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_12828 Corylus avellana HOM05D000448 ORTHO05D000291 1.6e-52 209.5 141 100.0
Haze_16753 Corylus avellana HOM05D000448 ORTHO05D000291 3.1e-43 178.7 140 89.3
Haze_12829 Corylus avellana HOM05D000480 ORTHO05D000313 5.8e-42 174.5 140 82.1
Haze_12827 Corylus avellana HOM05D000448 ORTHO05D000291 1.1e-37 160.2 140 84.3
Cfa014373 Carpinus fangiana HOM05D000180 ORTHO05D000313 1.2e-18 97.1 54 88.9
Haze_12833 Corylus avellana HOM05D000480 ORTHO05D000313 1.2e-18 97.1 54 88.9
Cfa014365 Carpinus fangiana HOM05D000480 ORTHO05D000313 3.8e-17 92.0 54 83.3
Haze_12822 Corylus avellana HOM05D000480 ORTHO05D000313 1.4e-16 90.1 54 81.5
Haze_12836 Corylus avellana HOM05D000480 ORTHO05D000313 9.4e-16 87.4 53 81.1
Haze_12841 Corylus avellana HOM05D000480 ORTHO05D000313 1.4e-14 83.6 53 77.4
Cfa014367 Carpinus fangiana HOM05D000480 ORTHO05D000313 2.3e-14 82.8 54 75.9
Cfa017739 Carpinus fangiana HOM05D000480 ORTHO05D000313 2.3e-14 82.8 54 75.9
Cfa014364 Carpinus fangiana HOM05D000480 ORTHO05D000313 9.7e-13 77.4 54 77.8
Cfa014370 Carpinus fangiana HOM05D000480 ORTHO05D000313 9.7e-13 77.4 54 77.8
Haze_12826 Corylus avellana HOM05D000480 ORTHO05D000313 1.7e-12 76.6 46 80.4
Haze_13577 Corylus avellana HOM05D000448 ORTHO05D000291 2.8e-12 75.9 50 74.0
Cfa014368 Carpinus fangiana HOM05D000480 ORTHO05D000313 4.8e-12 75.1 54 70.4
Thecc.09G132900 Theobroma cacao HOM05D000448 ORTHO05D000291 4.2e-08 62.0 55 58.2
Thecc.09G133100 Theobroma cacao HOM05D000448 ORTHO05D000291 4.2e-08 62.0 55 58.2
CAN.G712.1 Capsicum annuum HOM05D000448 ORTHO05D000291 5.5e-08 61.6 53 60.4
ECA248G3007 Erigeron canadensis HOM05D000448 ORTHO05D000291 7.2e-08 61.2 54 57.4
TAR383G0315 Trochodendron aralioides HOM05D000448 ORTHO05D000291 7.2e-08 61.2 54 53.7
Lsat_1_v5_gn_5_29501 Lactuca sativa HOM05D000448 ORTHO05D000291 1.2e-07 60.5 54 55.6
Atru.chr2.622 Acer truncatum HOM05D000448 ORTHO05D000291 1.6e-07 60.1 54 53.7
CAN.G68.15 Capsicum annuum HOM05D000448 ORTHO05D000291 1.6e-07 60.1 53 58.5
TAR121G0002 Trochodendron aralioides HOM05D000448 ORTHO05D000291 1.6e-07 60.1 54 51.9
ECA248G1701 Erigeron canadensis HOM05D000448 ORTHO05D000291 2.1e-07 59.7 53 58.5
Peaxi162Scf00565g00821 Petunia axillaris HOM05D000448 ORTHO05D000291 2.1e-07 59.7 55 56.4
Peaxi162Scf00565g00827 Petunia axillaris HOM05D000448 ORTHO05D000291 2.1e-07 59.7 76 44.7
AUR62001506 Chenopodium quinoa HOM05D000448 ORTHO05D000291 2.7e-07 59.3 55 52.7
TAR501G0001 Trochodendron aralioides HOM05D000448 ORTHO05D000291 2.7e-07 59.3 54 51.9
EL10Ac7g16389 Beta vulgaris HOM05D000448 ORTHO05D000291 3.6e-07 58.9 55 50.9
Nitab4.5_0000286g0030 Nicotiana tabacum HOM05D000448 ORTHO05D000291 3.6e-07 58.9 55 52.7
Sopen08g017880 Solanum pennellii HOM05D000448 ORTHO05D000291 3.6e-07 58.9 53 54.7
Lsat_1_v5_gn_5_29481 Lactuca sativa HOM05D000448 ORTHO05D000291 4.7e-07 58.5 54 53.7
AUR62001505 Chenopodium quinoa HOM05D000448 ORTHO05D000291 6.1e-07 58.2 55 50.9
Duzib168G2221 Durio zibethinus HOM05D000448 ORTHO05D000291 6.1e-07 58.2 53 54.7
Duzib168G2236 Durio zibethinus HOM05D000448 ORTHO05D000291 6.1e-07 58.2 56 53.6
Lsat_1_v5_gn_5_30600 Lactuca sativa HOM05D000448 ORTHO05D000291 6.1e-07 58.2 54 55.6
Solyc08g062360.3 Solanum lycopersicum HOM05D000448 ORTHO05D000291 8.0e-07 57.8 53 54.7
CSS0043523 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 1.0e-06 57.4 54 51.9
AUR62009865 Chenopodium quinoa HOM05D000448 ORTHO05D000291 1.0e-06 57.4 54 50.0
COL.COLO4_35167 Corchorus olitorius HOM05D000448 ORTHO05D000291 1.0e-06 57.4 53 52.8
Solyc08g062330.3 Solanum lycopersicum HOM05D000448 ORTHO05D000291 1.0e-06 57.4 55 50.9
Sopen08g017860 Solanum pennellii HOM05D000448 ORTHO05D000291 1.0e-06 57.4 55 50.9
COL.COLO4_35169 Corchorus olitorius HOM05D000448 ORTHO05D000291 1.4e-06 57.0 53 52.8
PGSC0003DMG400013763 Solanum tuberosum HOM05D000448 ORTHO05D000291 1.4e-06 57.0 54 53.7
Duzib150G0465 Durio zibethinus HOM05D000448 ORTHO05D000291 1.8e-06 56.6 53 54.7
Duzib150G1064 Durio zibethinus HOM05D000448 ORTHO05D000291 1.8e-06 56.6 53 56.6
PGR083G0620 Punica granatum HOM05D000448 ORTHO05D000291 1.8e-06 56.6 50 58.0
AUR62009864 Chenopodium quinoa HOM05D000448 ORTHO05D000291 2.3e-06 56.2 55 49.1
Duzib235G1327 Durio zibethinus HOM05D000448 ORTHO05D000291 2.3e-06 56.2 52 55.8
Nn3g19311 Nelumbo nucifera HOM05D000448 ORTHO05D000291 2.3e-06 56.2 54 57.4
Atru.chr7.1898 Acer truncatum HOM05D000448 ORTHO05D000291 3.0e-06 55.8 54 50.0
Ciclev10009252m.g Citrus clementina HOM05D000448 ORTHO05D000291 3.0e-06 55.8 53 52.8
Migut.I00414 Erythranthe guttata HOM05D000448 ORTHO05D000291 3.0e-06 55.8 58 43.1
QL01p016002 Quercus lobata HOM05D000480 ORTHO05D000313 3.0e-06 55.8 54 53.7
vmacro20893 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 3.0e-06 55.8 51 52.9
Ciclev10008188m.g Citrus clementina HOM05D000448 ORTHO05D000291 4.0e-06 55.5 54 51.9
Duzib168G2346 Durio zibethinus HOM05D000448 ORTHO05D000291 4.0e-06 55.5 53 52.8
Peaxi162Scf00565g00716 Petunia axillaris HOM05D000448 ORTHO05D000291 4.0e-06 55.5 55 52.7
Peaxi162Scf00565g00719 Petunia axillaris HOM05D000448 ORTHO05D000291 4.0e-06 55.5 55 52.7
Peaxi162Scf01938g00005 Petunia axillaris HOM05D000448 ORTHO05D000291 4.0e-06 55.5 55 52.7
Eucgr.E02801 Eucalyptus grandis HOM05D000448 ORTHO05D000291 5.2e-06 55.1 53 54.7
Eucgr.E02805 Eucalyptus grandis HOM05D000448 ORTHO05D000291 5.2e-06 55.1 53 54.7
Hma1.2p1_0231F.1_g097610 Hydrangea macrophylla HOM05D000448 ORTHO05D000291 5.2e-06 55.1 53 50.9
EL10Ac7g16388 Beta vulgaris HOM05D000448 ORTHO05D000291 6.7e-06 54.7 55 49.1
Eucgr.B00705 Eucalyptus grandis HOM05D000448 ORTHO05D000291 6.7e-06 54.7 53 54.7
HanXRQChr16g0523041 Helianthus annuus HOM05D000448 ORTHO05D000291 6.7e-06 54.7 52 53.8
Potri.006G223800 Populus trichocarpa HOM05D000448 ORTHO05D000291 6.7e-06 54.7 58 48.3
vmacro20892 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 6.7e-06 54.7 53 49.1
MSTRG.12046 Avicennia marina HOM05D000448 ORTHO05D000291 8.8e-06 54.3 57 45.6
Cfa014598 Carpinus fangiana HOM05D000480 ORTHO05D000313 8.8e-06 54.3 54 57.4
Dinv37881 Davidia involucrata HOM05D000448 ORTHO05D000291 8.8e-06 54.3 54 50.0
Eucgr.C01885 Eucalyptus grandis HOM05D000448 ORTHO05D000291 8.8e-06 54.3 53 54.7
Eucgr.C01889 Eucalyptus grandis HOM05D000448 ORTHO05D000291 8.8e-06 54.3 53 54.7
HanXRQChr02g0058091 Helianthus annuus HOM05D000448 ORTHO05D000291 8.8e-06 54.3 54 53.7


User provided reference genes

Program Settings