Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_12787 Corylus avellana HOM05D002897 ORTHO05D008718 3.1e-148 528.5 276 100.0
Cfa014332 Carpinus fangiana HOM05D002897 ORTHO05D008718 2.6e-126 455.7 276 87.7
CiPaw.03G157200 Carya illinoinensis HOM05D002897 ORTHO05D008718 1.3e-109 400.2 277 78.7
QL08p031170 Quercus lobata HOM05D002897 ORTHO05D008718 3.2e-100 369.0 279 70.3
Prupe.3G212700 Prunus persica HOM05D002897 ORTHO05D008718 3.7e-93 345.5 279 68.8
Thecc.01G180000 Theobroma cacao HOM05D002897 ORTHO05D008718 5.4e-92 341.7 276 68.1
Gorai.007G171100 Gossypium raimondii HOM05D002897 ORTHO05D008718 3.5e-91 339.0 276 64.9
Gohir.D11G160500 Gossypium hirsutum HOM05D002897 ORTHO05D008718 1.0e-90 337.4 276 64.5
Cpa.g.sc132.3 Carica papaya HOM05D002897 ORTHO05D008718 3.9e-90 335.5 276 64.9
Duzib138G1172 Durio zibethinus HOM05D002897 ORTHO05D008718 1.1e-89 334.0 270 65.6
TAR624G0001 Trochodendron aralioides HOM05D002897 ORTHO05D008718 4.3e-89 332.0 276 65.2
Potri.014G156700 Populus trichocarpa HOM05D002897 ORTHO05D008718 1.6e-88 330.1 277 62.8
Manes.13G067751 Manihot esculenta HOM05D002897 ORTHO05D008718 2.1e-88 329.7 276 64.5
Manes.13G067750 Manihot esculenta HOM05D002897 ORTHO05D008718 3.6e-88 328.9 276 64.5
Gohir.A11G153700 Gossypium hirsutum HOM05D002897 ORTHO05D008718 8.1e-88 327.8 276 62.3
Actinidia09731 Actinidia chinensis HOM05D002897 ORTHO05D008718 1.8e-87 326.6 276 64.5
Nn1g07262 Nelumbo nucifera HOM05D002897 ORTHO05D008718 3.1e-87 325.9 276 63.8
FAN05G4893 Fragaria x ananassa HOM05D002897 ORTHO05D008718 4.0e-87 325.5 278 63.3
Ciclev10016301m.g Citrus clementina HOM05D002897 ORTHO05D008718 6.8e-87 324.7 277 62.5
FAN02G2770 Fragaria x ananassa HOM05D002897 ORTHO05D008718 1.2e-86 323.9 278 62.9
Atru.chr6.3235 Acer truncatum HOM05D002897 ORTHO05D008718 2.0e-86 323.2 276 63.8
Hma1.2p1_2044F.1_g312350 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 2.0e-86 323.2 278 62.9
CSS0022002 Camellia sinensis var. sinensis HOM05D002897 ORTHO05D008718 4.4e-86 322.0 277 65.0
FvH4_6g42620 Fragaria vesca HOM05D002897 ORTHO05D008718 5.8e-86 321.6 278 62.2
GSVIVG01030483001 Vitis vinifera HOM05D002897 ORTHO05D008718 1.3e-85 320.5 276 61.6
Sabra14G0118500 Salix brachista HOM05D002897 ORTHO05D008718 2.2e-85 319.7 277 62.1
TWI18G1283 Tripterygium wilfordii HOM05D002897 ORTHO05D008718 2.2e-85 319.7 279 63.4
ClCG02G002140 Citrullus lanatus HOM05D002897 ORTHO05D008718 4.9e-85 318.5 277 62.1
MELO3C018838.2 Cucumis melo HOM05D002897 ORTHO05D008718 4.9e-85 318.5 277 61.7
RcHm_v2.0_Chr2g0158471 Rosa chinensis HOM05D002897 ORTHO05D008718 1.9e-84 316.6 277 62.1
Solyc07g049200.4 Solanum lycopersicum HOM05D002897 ORTHO05D008718 1.9e-84 316.6 278 61.2
Oeu051891.2 Olea europaea HOM05D002897 ORTHO05D008718 5.4e-84 315.1 287 59.9
PGSC0003DMG400000696 Solanum tuberosum HOM05D002897 ORTHO05D008718 2.1e-83 313.2 278 60.8
vmacro12177 Vaccinium macrocarpon HOM05D002897 ORTHO05D008718 2.1e-83 313.2 276 62.0
Dinv39736 Davidia involucrata HOM05D002897 ORTHO05D008718 2.7e-83 312.8 272 61.4
Sopen07g025210 Solanum pennellii HOM05D002897 ORTHO05D008718 2.7e-83 312.8 278 60.4
Rhsim06G0166000 Rhododendron simsii HOM05D002897 ORTHO05D008718 3.5e-83 312.4 287 60.3
CsaV3_7G003360 Cucumis sativus L. HOM05D002897 ORTHO05D008718 7.8e-83 311.2 277 61.0
Sed0013072 Sechium edule HOM05D002897 ORTHO05D008718 9.6e-81 304.3 277 60.6
MSTRG.14141 Avicennia marina HOM05D002897 ORTHO05D008718 3.6e-80 302.4 281 59.4
THA.LOC104826141 Tarenaya hassleriana HOM05D002897 ORTHO05D008718 4.7e-80 302.0 274 60.2
Peaxi162Scf00921g00023 Petunia axillaris HOM05D002897 ORTHO05D008718 1.4e-79 300.4 277 57.0
Aqoxy1G03476 Aquilegia oxysepala HOM05D002897 ORTHO05D008718 3.1e-79 299.3 282 60.6
Glyma.14G046500 Glycine max HOM05D002897 ORTHO05D008718 2.0e-78 296.6 277 59.6
VMungo0647G1784 Vigna mungo HOM05D002897 ORTHO05D008718 2.6e-78 296.2 277 58.8
Glyma.02G270500 Glycine max HOM05D002897 ORTHO05D008718 7.6e-78 294.7 277 58.1
Lsat_1_v5_gn_5_123640 Lactuca sativa HOM05D002897 ORTHO05D008718 7.6e-78 294.7 281 57.3
SGA_v2.0_scaffold49G18345 Striga asiatica HOM05D002897 ORTHO05D008718 7.6e-78 294.7 279 55.6
Phvul.008G211400 Phaseolus vulgaris HOM05D002897 ORTHO05D008718 1.3e-77 293.9 277 58.8
HanXRQChr12g0373611 Helianthus annuus HOM05D002897 ORTHO05D008718 2.2e-77 293.1 278 56.5
AT1G05060 Arabidopsis thaliana HOM05D002897 ORTHO05D008718 2.9e-77 292.7 280 58.6
Nitab4.5_0012091g0010 Nicotiana tabacum HOM05D002897 ORTHO05D008718 2.9e-77 292.7 275 60.0
AL1G14810 Arabidopsis lyrata HOM05D002897 ORTHO05D008718 8.4e-77 291.2 277 58.1
SalBow1G3579 Salvia bowleyana HOM05D002897 ORTHO05D008718 1.1e-76 290.8 278 56.1
arahy.Tifrunner.gnm1.ann1.QRVI7E Arachis hypogaea HOM05D002897 ORTHO05D008718 1.9e-76 290.0 285 55.1
Carub.0001s0433 Capsella rubella HOM05D002897 ORTHO05D008718 1.9e-76 290.0 278 58.3
Ca_06120_v3 Cicer arietinum L. HOM05D002897 ORTHO05D008718 2.4e-76 289.7 276 57.2
Thhalv10008572m.g Eutrema salsugineum HOM05D002897 ORTHO05D008718 2.4e-76 289.7 275 57.1
SalBow1G2496 Salvia bowleyana HOM05D002897 ORTHO05D008718 2.4e-76 289.7 278 56.1
Sp1g03930 Schrenkiella parvula HOM05D002897 ORTHO05D008718 3.5e-75 285.8 275 57.8
arahy.Tifrunner.gnm1.ann1.YEZ88R Arachis hypogaea HOM05D002897 ORTHO05D008718 4.6e-75 285.4 290 54.1
Cc05_g03270 Coffea canephora HOM05D002897 ORTHO05D008718 4.6e-75 285.4 276 55.1
ECA234G1553 Erigeron canadensis HOM05D002897 ORTHO05D008718 4.6e-75 285.4 278 56.5
Sc06g0009610 Simmondsia chinensis HOM05D002897 ORTHO05D008718 4.6e-75 285.4 279 55.9
Medtr5g085980 Medicago truncatula HOM05D002897 ORTHO05D008718 6.0e-75 285.0 273 56.8
C05p31940 Brassica napus HOM05D002897 ORTHO05D008718 1.0e-74 284.3 281 56.2
Migut.H01234 Erythranthe guttata HOM05D002897 ORTHO05D008718 1.0e-74 284.3 287 55.7
TPR.G14446 Trifolium pratense HOM05D002897 ORTHO05D008718 1.0e-74 284.3 276 56.5
Eucgr.A01101 Eucalyptus grandis HOM05D002897 ORTHO05D008718 1.7e-74 283.5 285 53.7
BcaB07g32946 Brassica carinata HOM05D002897 ORTHO05D008718 3.0e-74 282.7 275 55.6
Nitab4.5_0000482g0070 Nicotiana tabacum HOM05D002897 ORTHO05D008718 3.9e-74 282.3 280 57.9
Lalb_Chr04g0249891 Lupinus albus HOM05D002897 ORTHO05D008718 6.6e-74 281.6 284 56.3
A09p33710 Brassica napus HOM05D002897 ORTHO05D008718 1.9e-73 280.0 280 55.7
Hma1.2p1_1986F.1_g310090 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 4.3e-73 278.9 233 61.8
BolC5t31920H Brassica oleracea HOM05D002897 ORTHO05D008718 5.6e-73 278.5 276 55.4
AUR62035641 Chenopodium quinoa HOM05D002897 ORTHO05D008718 1.6e-72 276.9 276 58.3
BcaC05g27288 Brassica carinata HOM05D002897 ORTHO05D008718 3.6e-72 275.8 276 55.1
BraA09t38920Z Brassica rapa HOM05D002897 ORTHO05D008718 3.6e-72 275.8 275 55.3
Psat4g114440 Pisum sativum HOM05D002897 ORTHO05D008718 6.2e-72 275.0 273 53.8
LjContig00564g0002899 Lotus japonicus HOM05D002897 ORTHO05D008718 4.0e-71 272.3 278 55.4
Lj8C128G4 Lonicera japonica HOM05D002897 ORTHO05D008718 3.4e-70 269.2 279 55.2
CARHR004510 Cardamine hirsuta HOM05D002897 ORTHO05D008718 1.7e-69 266.9 277 54.5
EL10Ac4g07512 Beta vulgaris HOM05D002897 ORTHO05D008718 1.1e-68 264.2 282 52.5
MD17G1102200 Malus domestica HOM05D002897 ORTHO05D008718 1.4e-68 263.8 233 64.4
MBI19_g24999_MAGBIO Magnolia biondii HOM05D002897 ORTHO05D008718 7.1e-68 261.5 279 55.9
AUR62017163 Chenopodium quinoa HOM05D002897 ORTHO05D008718 3.9e-66 255.8 268 55.2
CDE07G0516 Ceratophyllum demersum HOM05D002897 ORTHO05D008718 3.1e-63 246.1 275 48.4
FAN14G2576 Fragaria x ananassa HOM05D002897 ORTHO05D008718 6.9e-63 245.0 277 53.4
PSO210G2604 Papaver somniferum HOM05D002897 ORTHO05D008718 1.7e-61 240.4 278 48.6
Aa31LG1G19710 Aethionema arabicum HOM05D002897 ORTHO05D008718 3.2e-60 236.1 322 44.7
Aqoxy1G03469 Aquilegia oxysepala HOM05D002897 ORTHO05D008718 5.5e-60 235.3 279 51.3
DCAR_012931 Daucus carota HOM05D002897 ORTHO05D008718 2.1e-59 233.4 277 49.8
Hma1.2p1_2044F.1_g312360 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 5.6e-57 225.3 212 61.3
Os06g0239700 Oryza sativa ssp. japonica HOM05D002897 ORTHO05D008718 5.6e-57 225.3 274 45.6
Zm00001eb280010 Zea mays HOM05D002897 ORTHO05D008718 1.4e-55 220.7 275 46.5
HPP92_017354 Vanilla planifolia HOM05D002897 ORTHO05D008718 5.7e-49 198.7 268 44.0
COL.COLO4_21853 Corchorus olitorius HOM05D002897 ORTHO05D008718 2.4e-47 193.4 179 60.9
unitig_21.g21003 Utricularia gibba HOM05D002897 ORTHO05D008718 1.4e-42 177.6 178 50.0
SEGI_41028 Sequoiadendron giganteum HOM05D002897 ORTHO05D008718 3.1e-39 166.4 262 39.3
CSS0034853 Camellia sinensis var. sinensis HOM05D002897 ORTHO05D008718 4.5e-38 162.5 221 46.6
Pp3c23_20260 Physcomitrium patens HOM05D002897 ORTHO05D008718 7.7e-30 135.2 266 38.0
MD06G1049400 Malus domestica HOM05D002897 ORTHO05D008718 3.2e-28 129.8 123 61.8
ATR0059G011 Amborella trichopoda HOM05D002897 ORTHO05D008718 2.0e-25 120.6 164 50.0
AagrBONN_evm.TU.Sc2ySwM_117.2821 Anthoceros agrestis HOM05D002897 ORTHO05D008718 1.3e-24 117.9 249 34.5
ATR0059G040 Amborella trichopoda HOM05D002897 ORTHO05D008718 5.5e-20 102.4 95 53.7
CANSAT64G1786 Cannabis sativa HOM05D002897 ORTHO05D008718 2.0e-17 94.0 64 65.6
SMO290G0011 Selaginella moellendorffii HOM05D013342 ORTHO05D008718 2.2e-13 80.5 239 27.2
SMO356G0703 Selaginella moellendorffii HOM05D013342 ORTHO05D008718 8.5e-13 78.6 241 28.6
Aa31sc72G10 Aethionema arabicum HOM05D002897 ORTHO05D008718 4.7e-11 72.8 126 37.3
HPP92_017340 Vanilla planifolia HOM05D002897 ORTHO05D008718 3.7e-08 63.2 111 41.4
BolC6t39233H Brassica oleracea HOM05D002897 ORTHO05D008718 2.7e-06 57.0 47 53.2


User provided reference genes

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