Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_12532 Corylus avellana HOM05D007261 ORTHO05D009163 2.6e-231 805.1 413 100.0
Cfa009475 Carpinus fangiana HOM05D007261 ORTHO05D009163 2.3e-123 446.4 413 63.4
QL03p048277 Quercus lobata HOM05D007261 ORTHO05D009163 1.1e-91 341.3 397 52.6
Manes.09G172600 Manihot esculenta HOM05D007261 ORTHO05D009163 4.0e-91 339.3 405 49.6
Dinv04437 Davidia involucrata HOM05D007261 ORTHO05D009163 2.2e-89 333.6 405 49.4
Cpa.g.sc38.54 Carica papaya HOM05D007261 ORTHO05D009163 2.3e-86 323.6 405 46.4
GSVIVG01001121001 Vitis vinifera HOM05D007261 ORTHO05D009163 5.8e-82 308.9 388 48.7
Potri.001G070800 Populus trichocarpa HOM05D007261 ORTHO05D009163 4.9e-81 305.8 403 46.2
Ciclev10029098m.g Citrus clementina HOM05D007261 ORTHO05D009163 8.4e-81 305.1 410 46.8
Prupe.1G211100 Prunus persica HOM05D007261 ORTHO05D009163 8.4e-81 305.1 389 45.5
Rhsim12G0015700 Rhododendron simsii HOM05D007261 ORTHO05D009163 1.4e-80 304.3 397 46.1
Hma1.2p1_0738F.1_g210990 Hydrangea macrophylla HOM05D007261 ORTHO05D009163 5.4e-80 302.4 391 46.0
Sabra01G0049700 Salix brachista HOM05D007261 ORTHO05D009163 7.1e-80 302.0 376 47.3
Sed0025955 Sechium edule HOM05D007261 ORTHO05D009163 1.2e-79 301.2 395 46.3
MELO3C026753.2 Cucumis melo HOM05D007261 ORTHO05D009163 1.6e-79 300.8 392 46.7
Atru.chr12.1480 Acer truncatum HOM05D007261 ORTHO05D009163 3.5e-79 299.7 383 47.3
CsaV3_3G043490 Cucumis sativus L. HOM05D007261 ORTHO05D009163 3.5e-79 299.7 392 46.2
RcHm_v2.0_Chr4g0428371 Rosa chinensis HOM05D007261 ORTHO05D009163 4.6e-79 299.3 384 45.3
Eucgr.J01661 Eucalyptus grandis HOM05D007261 ORTHO05D009163 1.0e-78 298.1 404 44.3
vmacro01006 Vaccinium macrocarpon HOM05D007261 ORTHO05D009163 1.3e-78 297.7 391 45.3
PGR119G1620 Punica granatum HOM05D007261 ORTHO05D009163 3.9e-78 296.2 392 46.2
ClCG10G013090 Citrullus lanatus HOM05D007261 ORTHO05D009163 5.1e-78 295.8 395 45.8
FvH4_4g22120 Fragaria vesca HOM05D007261 ORTHO05D009163 6.6e-78 295.4 384 44.5
Nn4g22065 Nelumbo nucifera HOM05D007261 ORTHO05D009163 6.6e-78 295.4 408 44.6
Thecc.01G239300 Theobroma cacao HOM05D007261 ORTHO05D009163 8.7e-78 295.0 409 44.3
FAN12G3746 Fragaria x ananassa HOM05D007261 ORTHO05D009163 1.1e-77 294.7 384 44.3
MD16G1145000 Malus domestica HOM05D007261 ORTHO05D009163 1.5e-77 294.3 395 44.6
MD13G1134400 Malus domestica HOM05D007261 ORTHO05D009163 1.9e-77 293.9 395 44.3
TAR629G2200 Trochodendron aralioides HOM05D007261 ORTHO05D009163 4.3e-77 292.7 394 45.2
CSS0010700 Camellia sinensis var. sinensis HOM05D007261 ORTHO05D009163 7.4e-77 292.0 390 45.1
AUR62003485 Chenopodium quinoa HOM05D007261 ORTHO05D009163 9.6e-77 291.6 407 44.0
FAN17G2458 Fragaria x ananassa HOM05D007261 ORTHO05D009163 1.3e-76 291.2 398 43.7
Duzib264G0686 Durio zibethinus HOM05D007261 ORTHO05D009163 1.6e-76 290.8 407 43.2
FAN07G0598 Fragaria x ananassa HOM05D007261 ORTHO05D009163 2.8e-76 290.0 397 43.3
CSS0041929 Camellia sinensis var. sinensis HOM05D007261 ORTHO05D009163 3.6e-76 289.7 390 44.9
Cc11_g14850 Coffea canephora HOM05D007261 ORTHO05D009163 6.2e-76 288.9 414 44.7
SalBow2G2703 Salvia bowleyana HOM05D007261 ORTHO05D009163 1.1e-75 288.1 370 48.6
AUR62017794 Chenopodium quinoa HOM05D007261 ORTHO05D009163 5.3e-75 285.8 408 43.9
Oeu021934.1 Olea europaea HOM05D007261 ORTHO05D009163 2.0e-74 283.9 399 44.4
Aa31LG7G10040 Aethionema arabicum HOM05D007261 ORTHO05D009163 2.2e-73 280.4 378 43.4
Glyma.18G298600 Glycine max HOM05D007261 ORTHO05D009163 4.9e-73 279.3 380 42.9
TWI18G1332 Tripterygium wilfordii HOM05D007261 ORTHO05D009163 6.4e-73 278.9 404 42.6
TWI36G0866 Tripterygium wilfordii HOM05D007261 ORTHO05D009163 8.4e-73 278.5 398 43.5
Phvul.008G004000 Phaseolus vulgaris HOM05D007261 ORTHO05D009163 1.4e-72 277.7 379 42.7
CiPaw.05G097700 Carya illinoinensis HOM05D007261 ORTHO05D009163 2.4e-72 276.9 405 44.0
Glyma.08G363400 Glycine max HOM05D007261 ORTHO05D009163 2.4e-72 276.9 380 42.9
Nitab4.5_0005286g0010 Nicotiana tabacum HOM05D007261 ORTHO05D009163 4.2e-72 276.2 401 43.1
arahy.Tifrunner.gnm1.ann1.EWZS38 Arachis hypogaea HOM05D007261 ORTHO05D009163 5.5e-72 275.8 375 43.2
arahy.Tifrunner.gnm1.ann1.X3R9N8 Arachis hypogaea HOM05D007261 ORTHO05D009163 5.5e-72 275.8 375 43.2
CANSAT01G0240 Cannabis sativa HOM05D007261 ORTHO05D009163 5.5e-72 275.8 371 43.7
PGSC0003DMG400002189 Solanum tuberosum HOM05D007261 ORTHO05D009163 9.3e-72 275.0 383 43.6
Peaxi162Scf01167g00120 Petunia axillaris HOM05D007261 ORTHO05D009163 2.7e-71 273.5 382 43.7
Gorai.007G068700 Gossypium raimondii HOM05D007261 ORTHO05D009163 3.5e-71 273.1 373 44.0
Ah.03g147240 Amaranthus hybridus HOM05D007261 ORTHO05D009163 4.6e-71 272.7 408 42.4
Gohir.D11G063500 Gossypium hirsutum HOM05D007261 ORTHO05D009163 6.0e-71 272.3 373 43.7
Gohir.A11G059400 Gossypium hirsutum HOM05D007261 ORTHO05D009163 1.0e-70 271.6 373 43.7
Hund12712 Selenicereus undatus HOM05D007261 ORTHO05D009163 1.8e-70 270.8 390 44.9
AT1G44960 Arabidopsis thaliana HOM05D007261 ORTHO05D009163 2.3e-70 270.4 406 41.4
Solyc11g040130.2 Solanum lycopersicum HOM05D007261 ORTHO05D009163 2.3e-70 270.4 379 43.3
Sopen11g017340 Solanum pennellii HOM05D007261 ORTHO05D009163 3.0e-70 270.0 383 42.8
THA.LOC104801410 Tarenaya hassleriana HOM05D007261 ORTHO05D009163 3.9e-70 269.6 388 43.0
Lj1g0023925 Lotus japonicus HOM05D007261 ORTHO05D009163 1.5e-69 267.7 370 42.4
Lalb_Chr04g0257321 Lupinus albus HOM05D007261 ORTHO05D009163 1.5e-69 267.7 372 42.5
AL1G52610 Arabidopsis lyrata HOM05D007261 ORTHO05D009163 1.9e-69 267.3 406 40.9
Aqoxy5G04229 Aquilegia oxysepala HOM05D007261 ORTHO05D009163 4.3e-69 266.2 403 41.4
EL10Ac6g15388 Beta vulgaris HOM05D007261 ORTHO05D009163 5.6e-69 265.8 408 41.4
Carub.0001s3543 Capsella rubella HOM05D007261 ORTHO05D009163 5.6e-69 265.8 398 41.2
CARHR036160 Cardamine hirsuta HOM05D007261 ORTHO05D009163 9.6e-69 265.0 408 40.2
CAN.G624.13 Capsicum annuum HOM05D007261 ORTHO05D009163 2.8e-68 263.5 400 42.5
Thhalv10011722m.g Eutrema salsugineum HOM05D007261 ORTHO05D009163 4.8e-68 262.7 405 40.2
Lj3A1078G18 Lonicera japonica HOM05D007261 ORTHO05D009163 4.8e-68 262.7 369 43.6
PSO017G6922 Papaver somniferum HOM05D007261 ORTHO05D009163 1.4e-67 261.2 363 44.4
PSO478G2703 Papaver somniferum HOM05D007261 ORTHO05D009163 2.6e-66 256.9 363 44.1
BraA10t42964Z Brassica rapa HOM05D007261 ORTHO05D009163 3.4e-66 256.5 394 40.4
BolC6t35245H Brassica oleracea HOM05D007261 ORTHO05D009163 4.5e-66 256.1 379 40.6
VMungo1383G1401 Vigna mungo HOM05D007261 ORTHO05D009163 4.5e-66 256.1 358 43.0
C06p01120 Brassica napus HOM05D007261 ORTHO05D009163 1.3e-65 254.6 377 41.1
Psat3g206640 Pisum sativum HOM05D007261 ORTHO05D009163 1.3e-65 254.6 380 41.3
BcaB07g33898 Brassica carinata HOM05D007261 ORTHO05D009163 1.7e-65 254.2 398 39.7
A10p07140 Brassica napus HOM05D007261 ORTHO05D009163 2.2e-65 253.8 394 39.8
Lsat_1_v5_gn_3_33201 Lactuca sativa HOM05D007261 ORTHO05D009163 2.2e-65 253.8 384 43.0
Migut.K01136 Erythranthe guttata HOM05D007261 ORTHO05D009163 3.8e-65 253.1 393 42.0
HanXRQChr06g0175371 Helianthus annuus HOM05D007261 ORTHO05D009163 4.9e-65 252.7 365 43.3
TPR.G9720 Trifolium pratense HOM05D007261 ORTHO05D009163 4.9e-65 252.7 384 41.1
Sp1g33800 Schrenkiella parvula HOM05D007261 ORTHO05D009163 2.5e-64 250.4 406 38.7
Medtr7g006790 Medicago truncatula HOM05D007261 ORTHO05D009163 4.2e-64 249.6 392 40.1
Medtr7g006800 Medicago truncatula HOM05D007261 ORTHO05D009163 4.2e-64 249.6 392 40.1
Ca_04086_v3 Cicer arietinum L. HOM05D007261 ORTHO05D009163 1.2e-63 248.1 393 39.4
ECA246G1741 Erigeron canadensis HOM05D007261 ORTHO05D009163 2.1e-63 247.3 375 42.1
Sc17g0001500 Simmondsia chinensis HOM05D007261 ORTHO05D009163 3.5e-63 246.5 339 43.4
HPP92_020118 Vanilla planifolia HOM05D007261 ORTHO05D009163 5.7e-61 239.2 365 40.5
CDE05G0176 Ceratophyllum demersum HOM05D007261 ORTHO05D009163 6.3e-60 235.7 373 39.7
Os11g0537300 Oryza sativa ssp. japonica HOM05D007261 ORTHO05D009163 1.5e-58 231.1 384 39.1
ATR0582G128 Amborella trichopoda HOM05D007261 ORTHO05D009163 1.0e-57 228.4 398 37.2
Zm00001eb197910 Zea mays HOM05D007261 ORTHO05D009163 1.3e-57 228.0 409 37.9
unitig_26.g10437 Utricularia gibba HOM05D000361 ORTHO05D007482 5.0e-57 226.1 402 37.6
Nitab4.5_0002113g0010 Nicotiana tabacum HOM05D000361 ORTHO05D007482 5.7e-53 212.6 143 76.2
SEGI_21849 Sequoiadendron giganteum HOM05D007261 ORTHO05D009163 2.0e-45 187.6 335 35.8
HPP92_020128 Vanilla planifolia HOM05D007261 ORTHO05D009163 4.1e-43 179.9 130 67.7
SMO351G0136 Selaginella moellendorffii HOM05D007261 ORTHO05D009163 3.6e-39 166.8 344 33.7
Pp3c19_21680 Physcomitrium patens HOM05D007261 ORTHO05D009163 7.9e-39 165.6 391 30.9
AagrBONN_evm.TU.Sc2ySwM_228.5286 Anthoceros agrestis HOM05D007261 ORTHO05D009163 1.4e-38 164.9 363 32.2
Mapoly0073s0041 Marchantia polymorpha HOM05D007261 ORTHO05D009163 2.4e-35 154.1 350 30.6
BcaC08g42890 Brassica carinata HOM05D007261 ORTHO05D009163 1.8e-27 127.9 279 31.5
Hma1.2p1_0738F.1_g211000 Hydrangea macrophylla HOM05D007261 ORTHO05D009163 4.1e-27 126.7 97 69.1
CBR_g44525 Chara braunii HOM05D007261 ORTHO05D009163 2.5e-24 117.5 374 27.8
CDE05G1764 Ceratophyllum demersum HOM05D007261 ORTHO05D009163 2.6e-21 107.5 95 55.8
Potri.003G159901 Populus trichocarpa HOM05D007261 ORTHO05D009163 2.0e-18 97.8 240 31.7
Actinidia30573 Actinidia chinensis HOM05D007261 ORTHO05D009163 1.5e-16 91.7 243 29.6
PRCOL_00004129 Prasinoderma coloniale HOM05D007261 ORTHO05D009163 1.3e-12 78.6 151 37.7


User provided reference genes

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