Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa009371 Carpinus fangiana HOM05D006087 ORTHO05D007479 4.3e-44 181.0 98 100.0
Haze_12421 Corylus avellana HOM05D006087 ORTHO05D007479 4.3e-44 181.0 98 100.0
CiPaw.06G102800 Carya illinoinensis HOM05D006087 ORTHO05D007479 1.1e-42 176.4 98 95.9
Lalb_Chr12g0206161 Lupinus albus HOM05D006087 ORTHO05D007479 8.5e-40 166.8 98 82.7
TWI75G0102 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 8.5e-40 166.8 97 84.5
TAR374G1631 Trochodendron aralioides HOM05D006087 ORTHO05D007479 1.4e-39 166.0 98 82.7
Prupe.1G225600 Prunus persica HOM05D006087 ORTHO05D007479 5.5e-39 164.1 97 88.7
Atru.chr11.2326 Acer truncatum HOM05D006087 ORTHO05D007479 9.4e-39 163.3 98 80.6
Eucgr.B03495 Eucalyptus grandis HOM05D006087 ORTHO05D007479 9.4e-39 163.3 96 85.4
Ciclev10033174m.g Citrus clementina HOM05D006087 ORTHO05D007479 1.2e-38 162.9 98 83.7
THA.LOC104812595 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 1.6e-38 162.5 98 78.6
Ca_16458_v3 Cicer arietinum L. HOM05D006087 ORTHO05D007479 2.1e-38 162.2 98 88.8
TWI18G0911 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 3.6e-38 161.4 97 81.4
AT5G43260 Arabidopsis thaliana HOM05D006087 ORTHO05D007479 1.0e-37 159.8 96 78.1
CiPaw.05G109600 Carya illinoinensis HOM05D006087 ORTHO05D007479 1.0e-37 159.8 98 79.6
AL8G17230 Arabidopsis lyrata HOM05D006087 ORTHO05D007479 1.4e-37 159.5 96 77.1
Psat5g096360 Pisum sativum HOM05D006087 ORTHO05D007479 1.4e-37 159.5 98 87.8
Sp2g08050 Schrenkiella parvula HOM05D006087 ORTHO05D007479 1.4e-37 159.5 97 78.4
TPR.G17782 Trifolium pratense HOM05D006087 ORTHO05D007479 1.8e-37 159.1 98 86.7
Manes.12G011100 Manihot esculenta HOM05D006087 ORTHO05D007479 3.0e-37 158.3 98 81.6
TAR622G0081 Trochodendron aralioides HOM05D006087 ORTHO05D007479 3.0e-37 158.3 100 80.0
Phvul.001G262000 Phaseolus vulgaris HOM05D006087 ORTHO05D007479 5.1e-37 157.5 98 76.5
Glyma.18G006400 Glycine max HOM05D006087 ORTHO05D007479 6.7e-37 157.1 96 78.1
MD13G1119200 Malus domestica HOM05D006087 ORTHO05D007479 6.7e-37 157.1 97 79.4
Medtr3g085300 Medicago truncatula HOM05D006087 ORTHO05D007479 1.1e-36 156.4 99 84.8
Glyma.11G250700 Glycine max HOM05D006087 ORTHO05D007479 1.5e-36 156.0 96 77.1
A06p47950 Brassica napus HOM05D006087 ORTHO05D007479 2.0e-36 155.6 97 76.3
C07p25860 Brassica napus HOM05D006087 ORTHO05D007479 2.0e-36 155.6 97 76.3
BolC7t43103H Brassica oleracea HOM05D006087 ORTHO05D007479 2.0e-36 155.6 97 76.3
BraA06t27665Z Brassica rapa HOM05D006087 ORTHO05D007479 2.0e-36 155.6 97 76.3
Carub.0008s0544 Capsella rubella HOM05D006087 ORTHO05D007479 2.5e-36 155.2 97 77.3
BcaC04g21941 Brassica carinata HOM05D006087 ORTHO05D007479 5.7e-36 154.1 97 75.3
C09p25630 Brassica napus HOM05D006087 ORTHO05D007479 5.7e-36 154.1 97 75.3
BolC9t55466H Brassica oleracea HOM05D006087 ORTHO05D007479 5.7e-36 154.1 97 75.3
BraA09t37633Z Brassica rapa HOM05D006087 ORTHO05D007479 7.4e-36 153.7 97 75.3
QL03p052667 Quercus lobata HOM05D006087 ORTHO05D007479 7.4e-36 153.7 97 80.4
TWI36G1569 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 7.4e-36 153.7 95 77.9
A09p20220 Brassica napus HOM05D006087 ORTHO05D007479 1.3e-35 152.9 97 75.3
Thecc.02G208200 Theobroma cacao HOM05D006087 ORTHO05D007479 1.3e-35 152.9 99 80.8
Sc04g0010140 Simmondsia chinensis HOM05D006087 ORTHO05D007479 1.7e-35 152.5 98 78.6
Ah.03g136140 Amaranthus hybridus HOM05D006087 ORTHO05D007479 2.8e-35 151.8 97 73.2
COL.COLO4_20404 Corchorus olitorius HOM05D006087 ORTHO05D007479 2.8e-35 151.8 99 79.8
MELO3C011864.2 Cucumis melo HOM05D006087 ORTHO05D007479 2.8e-35 151.8 97 76.3
BcaB07g31021 Brassica carinata HOM05D006087 ORTHO05D007479 6.3e-35 150.6 97 73.2
Gohir.D12G152800 Gossypium hirsutum HOM05D006087 ORTHO05D007479 8.2e-35 150.2 97 74.2
Gorai.008G165300 Gossypium raimondii HOM05D006087 ORTHO05D007479 8.2e-35 150.2 97 74.2
Oeu036868.1 Olea europaea HOM05D006087 ORTHO05D007479 8.2e-35 150.2 100 76.0
CARHR180610 Cardamine hirsuta HOM05D006087 ORTHO05D007479 1.1e-34 149.8 96 76.0
MD16G1119600 Malus domestica HOM05D006087 ORTHO05D007479 1.1e-34 149.8 97 73.2
Aa31LG9G13330 Aethionema arabicum HOM05D006087 ORTHO05D007479 2.4e-34 148.7 96 77.1
Lj4g0011842 Lotus japonicus HOM05D006087 ORTHO05D007479 2.4e-34 148.7 97 77.3
Solyc05g015470.1 Solanum lycopersicum HOM05D006087 ORTHO05D007479 5.3e-34 147.5 97 79.4
Sopen05g010780 Solanum pennellii HOM05D006087 ORTHO05D007479 5.3e-34 147.5 97 79.4
Cc11_g16920 Coffea canephora HOM05D006087 ORTHO05D007479 6.9e-34 147.1 100 75.0
Duzib251G0251 Durio zibethinus HOM05D006087 ORTHO05D007479 6.9e-34 147.1 97 76.3
CsaV3_5G030260 Cucumis sativus L. HOM05D006087 ORTHO05D007479 9.1e-34 146.7 97 73.2
EL10Ac6g13503 Beta vulgaris HOM05D006087 ORTHO05D007479 1.2e-33 146.4 93 75.3
FAN17G2012 Fragaria x ananassa HOM05D006087 ORTHO05D007479 1.2e-33 146.4 95 74.7
Duzib248G0070 Durio zibethinus HOM05D006087 ORTHO05D007479 1.5e-33 146.0 99 74.7
FAN07G1634 Fragaria x ananassa HOM05D006087 ORTHO05D007479 2.6e-33 145.2 95 73.7
FAN22G0702 Fragaria x ananassa HOM05D006087 ORTHO05D007479 2.6e-33 145.2 95 73.7
PGSC0003DMG400014051 Solanum tuberosum HOM05D006087 ORTHO05D007479 2.6e-33 145.2 97 78.4
FAN12G1341 Fragaria x ananassa HOM05D006087 ORTHO05D007479 3.4e-33 144.8 95 73.7
FAN12G1854 Fragaria x ananassa HOM05D006087 ORTHO05D007479 3.4e-33 144.8 95 73.7
Gohir.D04G182800 Gossypium hirsutum HOM05D006087 ORTHO05D007479 4.5e-33 144.4 99 74.7
Gorai.012G175800 Gossypium raimondii HOM05D006087 ORTHO05D007479 4.5e-33 144.4 99 74.7
Gohir.A12G148826 Gossypium hirsutum HOM05D006087 ORTHO05D007479 5.9e-33 144.1 97 72.2
PSO017G6027 Papaver somniferum HOM05D006087 ORTHO05D007479 5.9e-33 144.1 96 74.0
PSO478G2574 Papaver somniferum HOM05D006087 ORTHO05D007479 5.9e-33 144.1 96 74.0
RcHm_v2.0_Chr4g0430231 Rosa chinensis HOM05D006087 ORTHO05D007479 7.7e-33 143.7 95 73.7
unitig_749.g13305 Utricularia gibba HOM05D006087 ORTHO05D007479 1.0e-32 143.3 98 72.4
CANSAT01G2640 Cannabis sativa HOM05D006087 ORTHO05D007479 1.3e-32 142.9 100 78.0
Potri.001G056601 Populus trichocarpa HOM05D006087 ORTHO05D007479 1.7e-32 142.5 98 74.5
Hma1.2p1_0065F.1_g035460 Hydrangea macrophylla HOM05D006087 ORTHO05D007479 2.2e-32 142.1 100 75.0
CAN.G163.9 Capsicum annuum HOM05D006087 ORTHO05D007479 6.5e-32 140.6 102 71.6
Cpa.g.sc43.59 Carica papaya HOM05D006087 ORTHO05D007479 6.5e-32 140.6 98 76.5
Ah.02g130900 Amaranthus hybridus HOM05D006087 ORTHO05D007479 8.5e-32 140.2 93 68.8
Gohir.A04G139600 Gossypium hirsutum HOM05D006087 ORTHO05D007479 8.5e-32 140.2 99 72.7
Oeu004448.1 Olea europaea HOM05D006087 ORTHO05D007479 1.1e-31 139.8 100 74.0
THA.LOC104820522 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 3.2e-31 138.3 98 73.5
SGA_v2.0_scaffold9G04680 Striga asiatica HOM05D006087 ORTHO05D007479 5.5e-31 137.5 102 67.6
THA.LOC104825505 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 5.5e-31 137.5 103 77.7
Actinidia20712 Actinidia chinensis HOM05D006087 ORTHO05D007479 1.2e-30 136.3 98 69.4
Potri.003G171800 Populus trichocarpa HOM05D006087 ORTHO05D007479 1.2e-30 136.3 96 75.0
Duzib268G0474 Durio zibethinus HOM05D006087 ORTHO05D007479 2.1e-30 135.6 97 71.1
Lsat_1_v5_gn_4_3481 Lactuca sativa HOM05D006087 ORTHO05D007479 6.1e-30 134.0 102 66.7
THA.LOC104807129 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 2.3e-29 132.1 103 74.8
Nitab4.5_0001808g0020 Nicotiana tabacum HOM05D006087 ORTHO05D007479 3.9e-29 131.3 97 72.2
CDE02G3899 Ceratophyllum demersum HOM05D006087 ORTHO05D007479 6.7e-29 130.6 96 64.6
Lalb_Chr23g0278081 Lupinus albus HOM05D006087 ORTHO05D007479 8.8e-29 130.2 98 70.4
ATR0561G204 Amborella trichopoda HOM05D006087 ORTHO05D007479 2.0e-28 129.0 96 69.8
Nitab4.5_0000039g0180 Nicotiana tabacum HOM05D006087 ORTHO05D007479 2.0e-28 129.0 97 71.1
AUR62005621 Chenopodium quinoa HOM05D006087 ORTHO05D007479 7.4e-28 127.1 98 67.3
Rhsim12G0025700 Rhododendron simsii HOM05D006087 ORTHO05D007479 7.4e-28 127.1 101 70.3
Migut.K00735 Erythranthe guttata HOM05D006087 ORTHO05D007479 1.3e-27 126.3 100 67.0
AUR62028927 Chenopodium quinoa HOM05D006087 ORTHO05D007479 1.7e-27 125.9 98 68.4
PGR102G3303 Punica granatum HOM05D006087 ORTHO05D007479 1.7e-27 125.9 96 70.8
Aqoxy5G03370 Aquilegia oxysepala HOM05D006087 ORTHO05D007479 8.2e-27 123.6 94 70.2
MELO3C010741.2 Cucumis melo HOM05D006087 ORTHO05D007479 8.2e-27 123.6 96 65.6
HanXRQChr10g0310621 Helianthus annuus HOM05D006087 ORTHO05D007479 1.4e-26 122.9 98 63.3
arahy.Tifrunner.gnm1.ann1.1Z01XL Arachis hypogaea HOM05D006087 ORTHO05D007479 2.0e-25 119.0 102 65.7
ECA234G0111 Erigeron canadensis HOM05D006087 ORTHO05D007479 2.6e-25 118.6 86 67.4
CSS0016505 Camellia sinensis var. sinensis HOM05D006087 ORTHO05D007479 4.5e-25 117.9 85 74.1
CSS0027394 Camellia sinensis var. sinensis HOM05D006087 ORTHO05D007479 4.5e-25 117.9 85 74.1
MD05G1114700 Malus domestica HOM05D006087 ORTHO05D007479 1.0e-24 116.7 79 69.6
Sed0007875 Sechium edule HOM05D006087 ORTHO05D007479 6.5e-24 114.0 96 59.4
ClCG08G017160 Citrullus lanatus HOM05D006087 ORTHO05D007479 1.5e-23 112.8 96 62.5
ECA233G2512 Erigeron canadensis HOM05D006443 ORTHO05D007797 1.5e-23 112.8 82 65.9
MSTRG.8005 Avicennia marina HOM05D006087 ORTHO05D007479 4.2e-23 111.3 97 61.9
MBI11_g05327_MAGBIO Magnolia biondii HOM05D006087 ORTHO05D007479 7.2e-23 110.5 69 79.7
MBI11_g44422_MAGBIO Magnolia biondii HOM05D006087 ORTHO05D007479 7.2e-23 110.5 98 66.3
CsaV3_2G025430 Cucumis sativus L. HOM05D006087 ORTHO05D007479 6.1e-22 107.5 68 75.0
Migut.E00016 Erythranthe guttata HOM05D006087 ORTHO05D007479 1.0e-21 106.7 100 56.0
Mapoly0062s0032 Marchantia polymorpha HOM05D006087 ORTHO05D007479 1.0e-21 106.7 88 56.8
Pp3c14_11460 Physcomitrium patens HOM05D006087 ORTHO05D007479 1.1e-20 103.2 101 58.4
Pp3c22_5660 Physcomitrium patens HOM05D006087 ORTHO05D007479 7.0e-18 94.0 91 50.5
HPP92_024307 Vanilla planifolia HOM05D006087 ORTHO05D007479 7.0e-18 94.0 94 57.4
HPP92_024290 Vanilla planifolia HOM05D006087 ORTHO05D007479 1.2e-17 93.2 95 57.9
Pp3c18_21810 Physcomitrium patens HOM05D006087 ORTHO05D007479 1.6e-17 92.8 102 50.0
Pp3c21_520 Physcomitrium patens HOM05D006087 ORTHO05D007479 5.9e-17 90.9 92 48.9
Pp3c17_7480 Physcomitrium patens HOM05D006087 ORTHO05D007479 1.3e-16 89.7 99 51.5
Hma1.2p1_0349F.1_g132260 Hydrangea macrophylla HOM05D006087 ORTHO05D007479 2.1e-14 82.4 98 53.1
MD16G1189100 Malus domestica HOM05D006087 ORTHO05D007479 4.4e-12 74.7 40 80.0
Os02g0506600 Oryza sativa ssp. japonica HOM05D006087 ORTHO05D007479 5.7e-12 74.3 100 44.0
Zm00001eb241730 Zea mays HOM05D006087 ORTHO05D007479 2.4e-10 68.9 95 41.1
Zm00001eb180950 Zea mays HOM05D006087 ORTHO05D007479 1.6e-09 66.2 100 41.0
CDE05G3495 Ceratophyllum demersum HOM05D006087 ORTHO05D007479 2.7e-09 65.5 56 58.9
Zm00001eb421040 Zea mays HOM05D006087 ORTHO05D007479 3.5e-09 65.1 101 48.5
Oeu016235.1 Olea europaea HOM05D006087 ORTHO05D007479 5.5e-07 57.8 44 72.7
Cre10.g432100 Chlamydomonas reinhardtii HOM05D006087 ORTHO05D007479 3.6e-06 55.1 85 36.5


User provided reference genes

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