Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_12403 Corylus avellana HOM05D009398 ORTHO05D011511 7.6e-277 956.4 453 100.0
Cfa009360 Carpinus fangiana HOM05D009398 ORTHO05D011511 7.7e-128 461.5 287 79.4
Cfa009350 Carpinus fangiana HOM05D009398 ORTHO05D011511 6.4e-66 255.8 450 42.7
Haze_12398 Corylus avellana HOM05D009398 ORTHO05D011511 2.4e-65 253.8 388 44.6
Haze_12327 Corylus avellana HOM05D009398 ORTHO05D011511 2.9e-58 230.3 399 40.9
Haze_12354 Corylus avellana HOM05D009398 ORTHO05D011511 5.4e-49 199.5 304 41.1
Haze_12353 Corylus avellana HOM05D009398 ORTHO05D011511 9.3e-49 198.7 408 36.8
Cfa008760 Carpinus fangiana HOM05D009398 ORTHO05D011511 2.8e-45 187.2 399 38.1
Cfa009419 Carpinus fangiana HOM05D009398 ORTHO05D011511 4.8e-45 186.4 355 40.8
Cfa009056 Carpinus fangiana HOM05D009398 ORTHO05D011511 1.4e-44 184.9 396 37.6
Cfa005300 Carpinus fangiana HOM05D009398 ORTHO05D011511 5.8e-43 179.5 319 37.9
Cfa009423 Carpinus fangiana HOM05D009398 ORTHO05D011511 3.3e-38 163.7 394 34.5
Cfa009305 Carpinus fangiana HOM05D009398 ORTHO05D011511 1.6e-37 161.4 398 34.2
Cfa009296 Carpinus fangiana HOM05D009398 ORTHO05D011511 1.0e-34 152.1 322 37.0
Haze_12078 Corylus avellana HOM05D009398 ORTHO05D011511 1.7e-34 151.4 288 40.3
Cfa009357 Carpinus fangiana HOM05D009398 ORTHO05D011511 7.1e-33 146.0 208 47.1
Cfa009048 Carpinus fangiana HOM05D009398 ORTHO05D011511 1.3e-31 141.7 309 38.5
QL03p062579 Quercus lobata HOM05D037156 ORTHO05D011511 1.7e-18 98.2 278 32.4
QL03p065997 Quercus lobata HOM05D009398 ORTHO05D011511 2.2e-18 97.8 381 28.3
QL03p066121 Quercus lobata HOM05D009398 ORTHO05D011511 2.2e-18 97.8 381 28.3
Haze_12406 Corylus avellana HOM05D009398 ORTHO05D011511 2.5e-17 94.4 93 46.2
QL03p068339 Quercus lobata HOM05D009398 ORTHO05D011511 3.2e-17 94.0 249 30.1
Cfa008807 Carpinus fangiana HOM05D009398 ORTHO05D011511 2.1e-16 91.3 387 24.8
MD11G1124200 Malus domestica HOM05D000007 ORTHO05D009073 1.4e-15 88.6 399 24.3
FAN12G2506 Fragaria x ananassa HOM05D009792 ORTHO05D009073 2.3e-15 87.8 391 27.6
Haze_11821 Corylus avellana HOM05D009398 ORTHO05D011511 3.0e-15 87.4 384 24.5
FvH4_4g28520 Fragaria vesca HOM05D009792 ORTHO05D009073 6.7e-15 86.3 391 27.4
QL03p066111 Quercus lobata HOM05D009398 ORTHO05D011511 4.4e-14 83.6 292 27.4
Haze_06690 Corylus avellana HOM05D001139 ORTHO05D000936 2.2e-13 81.3 51 66.7
MD03G1110700 Malus domestica HOM05D000007 ORTHO05D009073 1.1e-12 79.0 391 25.1
Dinv16557 Davidia involucrata HOM05D000007 ORTHO05D009073 4.1e-12 77.0 397 27.0
RhsimUnG0048800 Rhododendron simsii HOM05D000171 ORTHO05D000101 2.6e-11 74.3 281 27.8
Prupe.6G093100 Prunus persica HOM05D000007 ORTHO05D009073 3.5e-11 73.9 398 25.9
RcHm_v2.0_Chr4g0436521 Rosa chinensis HOM05D009792 ORTHO05D009073 1.3e-10 72.0 386 25.1
AT2G40920 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.7e-10 71.6 314 25.2
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 1.7e-10 71.6 340 28.2
Thecc.01G185500 Theobroma cacao HOM05D000007 ORTHO05D000521 1.7e-10 71.6 291 23.7
Thhalv10005397m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 8.5e-10 69.3 306 24.2
A03p23050 Brassica napus HOM05D000171 ORTHO05D000101 1.1e-09 68.9 327 24.2
BraA03t11528Z Brassica rapa HOM05D000171 ORTHO05D000101 1.1e-09 68.9 327 24.2
Prupe.1G333100 Prunus persica HOM05D000007 ORTHO05D009073 1.5e-09 68.6 244 27.0
Rhsim04G0086800 Rhododendron simsii HOM05D000171 ORTHO05D000101 2.5e-09 67.8 279 27.2
Rhsim06G0172500 Rhododendron simsii HOM05D000007 ORTHO05D000521 3.2e-09 67.4 283 26.9
Duzib138G1457 Durio zibethinus HOM05D000007 ORTHO05D000521 6.1e-08 63.2 292 23.3
Gorai.001G219500 Gossypium raimondii HOM05D000007 ORTHO05D000521 1.0e-07 62.4 255 25.1
ClCG01G007450 Citrullus lanatus HOM05D000171 ORTHO05D009073 1.4e-07 62.0 151 31.1
DCAR_024299 Daucus carota HOM05D000007 ORTHO05D003666 1.8e-07 61.6 284 26.1
Gohir.D07G196000 Gossypium hirsutum HOM05D000007 ORTHO05D000521 3.9e-07 60.5 255 24.7
HanXRQChr07g0189371 Helianthus annuus HOM05D000171 ORTHO05D009073 6.7e-07 59.7 235 24.7
Cpa.g.sc136.4 Carica papaya HOM05D000007 ORTHO05D000521 1.1e-06 58.9 304 22.0
Rhsim12G0109800 Rhododendron simsii HOM05D009398 ORTHO05D011511 1.1e-06 58.9 140 30.0
EL10Ac8g20564 Beta vulgaris HOM05D000007 ORTHO05D000017 1.5e-06 58.5 195 25.6
FvH4_4g07100 Fragaria vesca HOM05D000007 ORTHO05D009073 3.3e-06 57.4 327 22.9
MD11G1124500 Malus domestica HOM05D009792 ORTHO05D009073 5.7e-06 56.6 413 22.0
Carub.0007s1445 Capsella rubella HOM05D000171 ORTHO05D000101 9.7e-06 55.8 171 28.1
PGR119G0108 Punica granatum HOM05D000171 ORTHO05D000101 9.7e-06 55.8 274 23.4


User provided reference genes

Program Settings