Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_12382 Corylus avellana HOM05D007857 ORTHO05D009355 3.0e-115 418.7 237 100.0
Cfa009341 Carpinus fangiana HOM05D007857 ORTHO05D009355 1.4e-91 340.1 237 85.7
QL03p054319 Quercus lobata HOM05D007857 ORTHO05D009355 3.0e-51 206.1 306 46.1
TAR374G0584 Trochodendron aralioides HOM05D007857 ORTHO05D009355 4.9e-41 172.2 289 39.4
Dinv10979 Davidia involucrata HOM05D007857 ORTHO05D009355 1.1e-40 171.0 291 40.5
CiPaw.06G100500 Carya illinoinensis HOM05D007857 ORTHO05D009355 2.3e-38 163.3 256 45.3
Dinv14814 Davidia involucrata HOM05D007857 ORTHO05D009355 3.0e-38 162.9 257 40.5
Actinidia20693 Actinidia chinensis HOM05D007857 ORTHO05D009355 8.0e-36 154.8 184 46.2
Sed0017756 Sechium edule HOM05D007857 ORTHO05D009355 8.0e-36 154.8 288 36.8
TWI75G0924 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 2.3e-35 153.3 267 39.3
CANSAT01G1499 Cannabis sativa HOM05D007857 ORTHO05D009355 4.0e-35 152.5 155 50.3
Thecc.02G276200 Theobroma cacao HOM05D007857 ORTHO05D009355 6.8e-35 151.8 295 36.6
Ca_18058_v3 Cicer arietinum L. HOM05D007857 ORTHO05D009355 1.2e-34 151.0 274 37.6
COL.COLO4_20347 Corchorus olitorius HOM05D007857 ORTHO05D009355 3.4e-34 149.4 259 35.9
Atru.chr11.2290 Acer truncatum HOM05D007857 ORTHO05D009355 4.4e-34 149.1 283 37.8
CSS0005757 Camellia sinensis var. sinensis HOM05D007857 ORTHO05D009355 5.8e-34 148.7 279 35.5
Hma1.2p1_1239F.1_g269420 Hydrangea macrophylla HOM05D007857 ORTHO05D009355 7.5e-34 148.3 153 49.7
Ciclev10033758m.g Citrus clementina HOM05D007857 ORTHO05D009355 1.3e-33 147.5 298 35.6
ClCG08G017230 Citrullus lanatus HOM05D007857 ORTHO05D009355 8.3e-33 144.8 154 48.7
CsaV3_2G025390 Cucumis sativus L. HOM05D007857 ORTHO05D009355 2.4e-32 143.3 155 49.0
Potri.010G057800 Populus trichocarpa HOM05D007857 ORTHO05D009355 3.2e-32 142.9 158 50.6
TWI36G0032 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 4.1e-32 142.5 213 45.1
TWI36G1497 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 4.1e-32 142.5 213 45.1
Sc04g0010010 Simmondsia chinensis HOM05D007857 ORTHO05D009355 5.4e-32 142.1 154 49.4
Solyc04g045390.1 Solanum lycopersicum HOM05D007857 ORTHO05D009355 9.2e-32 141.4 153 47.7
Rhsim12G0103100 Rhododendron simsii HOM05D007857 ORTHO05D009355 2.1e-31 140.2 155 47.1
MELO3C010736.2 Cucumis melo HOM05D007857 ORTHO05D009355 2.7e-31 139.8 154 47.4
Sabra10G0047600 Salix brachista HOM05D007857 ORTHO05D009355 3.5e-31 139.4 158 50.0
Lj4g0021592 Lotus japonicus HOM05D007857 ORTHO05D009355 1.3e-30 137.5 301 32.9
Potri.008G177300 Populus trichocarpa HOM05D007857 ORTHO05D009355 1.7e-30 137.1 158 47.5
Glyma.19G186500 Glycine max HOM05D007857 ORTHO05D009355 2.3e-30 136.7 159 47.8
Psat7g078480 Pisum sativum HOM05D007857 ORTHO05D009355 2.3e-30 136.7 276 37.3
Glyma.03G186400 Glycine max HOM05D007857 ORTHO05D009355 3.9e-30 136.0 159 47.2
Phvul.002G175100 Phaseolus vulgaris HOM05D007857 ORTHO05D009355 5.1e-30 135.6 264 36.0
Glyma.05G146200 Glycine max HOM05D007857 ORTHO05D009355 1.1e-29 134.4 157 46.5
MD13G1115600 Malus domestica HOM05D007857 ORTHO05D009355 3.3e-29 132.9 264 33.7
Nn4g22377 Nelumbo nucifera HOM05D007857 ORTHO05D009355 4.3e-29 132.5 180 41.1
RcHm_v2.0_Chr4g0430861 Rosa chinensis HOM05D007857 ORTHO05D009355 5.6e-29 132.1 158 46.8
TAR622G0135 Trochodendron aralioides HOM05D007857 ORTHO05D009355 7.3e-29 131.7 151 47.0
Eucgr.H04657 Eucalyptus grandis HOM05D007857 ORTHO05D009355 2.8e-28 129.8 260 38.8
Lalb_Chr07g0187361 Lupinus albus HOM05D007857 ORTHO05D009355 3.6e-28 129.4 291 36.4
FvH4_4g24090 Fragaria vesca HOM05D007857 ORTHO05D009355 4.7e-28 129.0 159 44.0
PSO782G1056 Papaver somniferum HOM05D007857 ORTHO05D009355 4.7e-28 129.0 172 37.8
TPR.G17074 Trifolium pratense HOM05D007857 ORTHO05D009355 4.7e-28 129.0 119 57.1
Medtr8g080270 Medicago truncatula HOM05D007857 ORTHO05D009355 1.1e-27 127.9 292 42.1
Sed0006532 Sechium edule HOM05D007857 ORTHO05D009355 1.1e-27 127.9 155 47.1
FAN12G2990 Fragaria x ananassa HOM05D007857 ORTHO05D009355 1.4e-27 127.5 159 44.0
VMungo0251G2942 Vigna mungo HOM05D007857 ORTHO05D009355 2.3e-27 126.7 133 48.1
MD16G1115600 Malus domestica HOM05D007857 ORTHO05D009355 3.1e-27 126.3 158 45.6
FAN07G0728 Fragaria x ananassa HOM05D007857 ORTHO05D009355 4.0e-27 125.9 156 43.6
PSO063G0898 Papaver somniferum HOM05D007857 ORTHO05D009355 4.0e-27 125.9 172 37.8
Prupe.1G231500 Prunus persica HOM05D007857 ORTHO05D009355 1.2e-26 124.4 274 33.9
Manes.13G017400 Manihot esculenta HOM05D007857 ORTHO05D009355 4.4e-26 122.5 166 41.6
Gohir.D02G151200 Gossypium hirsutum HOM05D007857 ORTHO05D009355 7.6e-26 121.7 171 40.4
Gohir.A03G127600 Gossypium hirsutum HOM05D007857 ORTHO05D009355 9.9e-26 121.3 171 39.8
Gorai.005G169600 Gossypium raimondii HOM05D007857 ORTHO05D009355 9.9e-26 121.3 171 40.4
Oeu020304.1 Olea europaea HOM05D001334 ORTHO05D001119 1.3e-25 120.9 171 40.4
DCAR_031188 Daucus carota HOM05D007857 ORTHO05D009355 2.2e-25 120.2 262 32.1
MBI11_g31349_MAGBIO Magnolia biondii HOM05D007857 ORTHO05D009355 4.9e-25 119.0 168 41.1
Aqoxy3G01489 Aquilegia oxysepala HOM05D007857 ORTHO05D009355 2.7e-23 113.2 230 32.6
Aqoxy5G03443 Aquilegia oxysepala HOM05D007857 ORTHO05D009355 2.7e-23 113.2 166 39.8
arahy.Tifrunner.gnm1.ann1.AFM6H1 Arachis hypogaea HOM05D007857 ORTHO05D009355 3.5e-23 112.8 119 49.6
arahy.Tifrunner.gnm1.ann1.32T9N9 Arachis hypogaea HOM05D007857 ORTHO05D009355 7.8e-23 111.7 119 49.6
arahy.Tifrunner.gnm1.ann1.ZB6N55 Arachis hypogaea HOM05D007857 ORTHO05D009355 7.8e-23 111.7 119 49.6
PSO357G0688 Papaver somniferum HOM05D007857 ORTHO05D009355 7.8e-23 111.7 177 36.2
PGSC0003DMG400017971 Solanum tuberosum HOM05D007857 ORTHO05D009355 4.0e-19 99.4 102 46.1
Cpa.g.sc43.26 Carica papaya HOM05D007857 ORTHO05D009355 8.9e-19 98.2 250 34.0
Sabra08G0135300 Salix brachista HOM05D007857 ORTHO05D009355 8.9e-19 98.2 142 40.1
SalBow2G3021 Salvia bowleyana HOM05D007857 ORTHO05D009355 5.8e-18 95.5 155 36.1
PGR119G0189 Punica granatum HOM05D007857 ORTHO05D009355 7.6e-18 95.1 282 30.9
Aa31sc48G30 Aethionema arabicum HOM05D010720 ORTHO05D009355 1.1e-16 91.3 252 27.0
Cc11_g16750 Coffea canephora HOM05D007857 ORTHO05D009355 1.4e-16 90.9 102 49.0
AL2G26210 Arabidopsis lyrata HOM05D010720 ORTHO05D009355 4.2e-16 89.4 257 28.4
Migut.K00709 Erythranthe guttata HOM05D007857 ORTHO05D009355 1.2e-15 87.8 142 37.3
Thhalv10019017m.g Eutrema salsugineum HOM05D010720 ORTHO05D009355 2.7e-15 86.7 256 27.7
BolC2t08453H Brassica oleracea HOM05D010720 ORTHO05D009355 6.0e-15 85.5 254 27.6
AT1G67540 Arabidopsis thaliana HOM05D010720 ORTHO05D009355 7.8e-15 85.1 258 27.5
SGA_v2.0_scaffold9G04766 Striga asiatica HOM05D007857 ORTHO05D009355 1.3e-14 84.3 109 44.0
THA.LOC104807888 Tarenaya hassleriana HOM05D010720 ORTHO05D009355 1.7e-14 84.0 254 28.0
CARHR060110 Cardamine hirsuta HOM05D010720 ORTHO05D009355 3.0e-14 83.2 252 31.7
BcaB05g24293 Brassica carinata HOM05D010720 ORTHO05D009355 3.9e-14 82.8 256 27.3
BcaC03g14845 Brassica carinata HOM05D010720 ORTHO05D009355 3.9e-14 82.8 254 26.8
C02p23110 Brassica napus HOM05D010720 ORTHO05D009355 1.5e-13 80.9 254 26.8
Carub.0002s1388 Capsella rubella HOM05D010720 ORTHO05D009355 1.9e-13 80.5 208 29.3
A02p14300 Brassica napus HOM05D010720 ORTHO05D009355 1.6e-12 77.4 254 25.6
BraA02t06491Z Brassica rapa HOM05D010720 ORTHO05D009355 1.6e-12 77.4 254 25.6
Nitab4.5_0004967g0040 Nicotiana tabacum HOM05D007857 ORTHO05D009355 2.1e-12 77.0 84 42.9
BcaNung05070 Brassica carinata HOM05D010720 ORTHO05D009355 3.6e-12 76.3 265 27.9
ATR0686G174 Amborella trichopoda HOM05D007857 ORTHO05D009355 1.8e-11 73.9 244 26.6
Sopen04g010360 Solanum pennellii HOM05D007857 ORTHO05D009355 3.1e-11 73.2 81 43.2
Sp5g22550 Schrenkiella parvula HOM05D010720 ORTHO05D009355 4.0e-11 72.8 210 26.2
BcaB03g15187 Brassica carinata HOM05D010720 ORTHO05D009355 1.5e-10 70.9 250 30.4
A07p34090 Brassica napus HOM05D010720 ORTHO05D009355 2.0e-10 70.5 250 27.6
BraA07t31035Z Brassica rapa HOM05D010720 ORTHO05D009355 2.0e-10 70.5 250 29.2
C06p42700 Brassica napus HOM05D010720 ORTHO05D009355 4.4e-10 69.3 254 29.5
BolC6t39169H Brassica oleracea HOM05D010720 ORTHO05D009355 4.4e-10 69.3 254 29.5
Os04g0504700 Oryza sativa ssp. japonica HOM05D007857 ORTHO05D009355 4.4e-10 69.3 104 34.6
Lsat_1_v5_gn_8_149921 Lactuca sativa HOM05D007857 ORTHO05D009355 1.7e-09 67.4 182 29.1
ECA233G3449 Erigeron canadensis HOM05D007857 ORTHO05D009355 4.2e-08 62.8 195 27.7
SHI17949 Sapria himalayana HOM05D007857 ORTHO05D009355 5.4e-08 62.4 123 33.3
Nitab4.5_0000146g0080 Nicotiana tabacum HOM05D007857 ORTHO05D009355 1.3e-06 57.8 69 40.6


User provided reference genes

Program Settings