Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_12354 Corylus avellana HOM05D009398 ORTHO05D011511 2.5e-197 691.8 328 100.0
Haze_12398 Corylus avellana HOM05D009398 ORTHO05D011511 2.5e-112 409.5 276 76.1
Cfa009350 Carpinus fangiana HOM05D009398 ORTHO05D011511 1.7e-92 343.6 307 60.3
Haze_12406 Corylus avellana HOM05D009398 ORTHO05D011511 6.0e-74 282.0 317 50.8
Haze_12403 Corylus avellana HOM05D009398 ORTHO05D011511 2.3e-49 200.3 304 41.1
Haze_12327 Corylus avellana HOM05D009398 ORTHO05D011511 1.7e-47 194.1 294 40.1
Cfa009357 Carpinus fangiana HOM05D009398 ORTHO05D011511 2.5e-43 180.3 117 75.2
Cfa005300 Carpinus fangiana HOM05D009398 ORTHO05D011511 1.4e-41 174.5 255 42.4
Cfa009419 Carpinus fangiana HOM05D009398 ORTHO05D011511 1.5e-40 171.0 244 45.1
Cfa008760 Carpinus fangiana HOM05D009398 ORTHO05D011511 1.1e-38 164.9 195 46.7
Cfa009360 Carpinus fangiana HOM05D009398 ORTHO05D011511 1.2e-37 161.4 261 40.2
Cfa009056 Carpinus fangiana HOM05D009398 ORTHO05D011511 2.9e-36 156.8 303 38.9
Haze_12078 Corylus avellana HOM05D009398 ORTHO05D011511 1.4e-33 147.9 323 37.5
Haze_12353 Corylus avellana HOM05D009398 ORTHO05D011511 5.7e-32 142.5 269 36.8
Cfa009423 Carpinus fangiana HOM05D009398 ORTHO05D011511 1.7e-31 141.0 274 34.7
Cfa009296 Carpinus fangiana HOM05D009398 ORTHO05D011511 5.5e-27 125.9 213 38.5
QL03p065997 Quercus lobata HOM05D009398 ORTHO05D011511 7.5e-24 115.5 191 36.1
QL03p066121 Quercus lobata HOM05D009398 ORTHO05D011511 7.5e-24 115.5 191 36.1
QL03p066111 Quercus lobata HOM05D009398 ORTHO05D011511 1.6e-21 107.8 263 33.8
FvH4_4g28520 Fragaria vesca HOM05D009792 ORTHO05D009073 4.3e-19 99.8 271 32.1
QL03p068339 Quercus lobata HOM05D009398 ORTHO05D011511 4.3e-19 99.8 237 32.9
QL03p062572 Quercus lobata HOM05D009398 ORTHO05D011511 7.3e-19 99.0 260 32.7
Haze_11821 Corylus avellana HOM05D009398 ORTHO05D011511 9.5e-19 98.6 275 30.5
FAN12G2506 Fragaria x ananassa HOM05D009792 ORTHO05D009073 9.5e-19 98.6 271 31.7
RcHm_v2.0_Chr4g0436521 Rosa chinensis HOM05D009792 ORTHO05D009073 9.5e-19 98.6 261 28.7
Cfa008807 Carpinus fangiana HOM05D009398 ORTHO05D011511 2.1e-18 97.4 271 30.6
QL03p068470 Quercus lobata HOM05D009398 ORTHO05D011511 3.6e-18 96.7 255 30.6
Cfa009305 Carpinus fangiana HOM05D009398 ORTHO05D011511 4.0e-17 93.2 134 46.3
FAN16G0179 Fragaria x ananassa HOM05D000007 ORTHO05D009073 1.5e-16 91.3 264 28.8
QL03p062618 Quercus lobata HOM05D009398 ORTHO05D009073 2.6e-16 90.5 264 30.3
Dinv16557 Davidia involucrata HOM05D000007 ORTHO05D009073 4.4e-16 89.7 260 30.8
Cfa009048 Carpinus fangiana HOM05D009398 ORTHO05D011511 7.5e-16 89.0 203 36.9
MD11G1124200 Malus domestica HOM05D000007 ORTHO05D009073 7.5e-16 89.0 221 30.8
MD03G1110700 Malus domestica HOM05D000007 ORTHO05D009073 1.7e-15 87.8 221 30.3
Prupe.1G333100 Prunus persica HOM05D000007 ORTHO05D009073 2.9e-15 87.0 250 28.0
Eucgr.G02384 Eucalyptus grandis HOM05D000171 ORTHO05D000101 1.1e-14 85.1 211 29.9
Prupe.6G093100 Prunus persica HOM05D000007 ORTHO05D009073 1.8e-14 84.3 216 31.5
Actinidia30171 Actinidia chinensis HOM05D000007 ORTHO05D009073 5.4e-14 82.8 234 28.2
Rhsim04G0086800 Rhododendron simsii HOM05D000171 ORTHO05D000101 7.8e-13 79.0 214 31.8
RcHm_v2.0_Chr4g0399251 Rosa chinensis HOM05D000007 ORTHO05D009073 2.3e-12 77.4 272 29.8
Duzib205G1409 Durio zibethinus HOM05D000171 ORTHO05D000101 1.5e-11 74.7 160 31.9
Sabra08G0109000 Salix brachista HOM05D000171 ORTHO05D000101 1.9e-11 74.3 233 30.0
RhsimUnG0048800 Rhododendron simsii HOM05D000171 ORTHO05D000101 4.3e-11 73.2 215 31.2
Haze_06690 Corylus avellana HOM05D001139 ORTHO05D000936 7.3e-11 72.4 48 64.6
Sabra15G0099300 Salix brachista HOM05D000171 ORTHO05D000101 9.5e-11 72.0 233 30.0
FAN22G0536 Fragaria x ananassa HOM05D009792 ORTHO05D009073 1.2e-10 71.6 250 27.6
Rhsim08G0197100 Rhododendron simsii HOM05D000171 ORTHO05D000101 1.6e-10 71.2 182 29.7
MD11G1124500 Malus domestica HOM05D009792 ORTHO05D009073 4.7e-10 69.7 204 30.4
Rhsim08G0210600 Rhododendron simsii HOM05D000171 ORTHO05D000101 6.2e-10 69.3 178 28.1
CARHR155810 Cardamine hirsuta HOM05D000171 ORTHO05D000101 8.0e-10 68.9 217 24.4
TAR371G0093 Trochodendron aralioides HOM05D000007 ORTHO05D007252 6.8e-09 65.9 244 25.4
BcaB08g34488 Brassica carinata HOM05D000171 ORTHO05D000101 1.2e-08 65.1 251 23.5
Rhsim12G0109800 Rhododendron simsii HOM05D009398 ORTHO05D011511 1.5e-08 64.7 174 29.9
Lj2g0026007 Lotus japonicus HOM05D000007 ORTHO05D000017 4.4e-08 63.2 221 26.7
Prupe.1G300900 Prunus persica HOM05D015152 ORTHO05D009073 5.8e-08 62.8 243 24.7
HanXRQChr05g0146481 Helianthus annuus HOM05D000171 ORTHO05D009073 7.5e-08 62.4 268 22.4
PSO447G0256 Papaver somniferum HOM05D000007 ORTHO05D000017 9.8e-08 62.0 266 21.8
DCAR_011586 Daucus carota HOM05D000007 ORTHO05D009073 1.3e-07 61.6 281 22.4
Lj2g0023053 Lotus japonicus HOM05D000007 ORTHO05D000017 1.3e-07 61.6 203 24.6
Carub.0007s2124 Capsella rubella HOM05D000171 ORTHO05D000101 1.7e-07 61.2 266 22.6
Dinv16551 Davidia involucrata HOM05D000171 ORTHO05D000101 1.7e-07 61.2 151 31.8
AL1G44470 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.2e-07 60.8 160 27.5
BolC7t40961H Brassica oleracea HOM05D000171 ORTHO05D000101 2.2e-07 60.8 259 24.7
HanXRQChr02g0047271 Helianthus annuus HOM05D000171 ORTHO05D009073 2.2e-07 60.8 222 26.1
Potri.001G458400 Populus trichocarpa HOM05D000007 ORTHO05D000101 2.2e-07 60.8 239 24.7
Prupe.1G285300 Prunus persica HOM05D000007 ORTHO05D009073 2.2e-07 60.8 227 29.1
Duzib150G0415 Durio zibethinus HOM05D009398 ORTHO05D009073 4.9e-07 59.7 217 29.0
Oeu063628.1 Olea europaea HOM05D000007 ORTHO05D000521 4.9e-07 59.7 285 23.5
HanXRQChr05g0137821 Helianthus annuus HOM05D000171 ORTHO05D009073 6.4e-07 59.3 220 25.5
HanXRQChr05g0146451 Helianthus annuus HOM05D000007 ORTHO05D009073 6.4e-07 59.3 258 24.0
BcaB08g34490 Brassica carinata HOM05D000171 ORTHO05D000101 1.1e-06 58.5 246 25.2
Lj2g0027921 Lotus japonicus HOM05D000007 ORTHO05D000017 1.1e-06 58.5 202 25.7
FAN07G0854 Fragaria x ananassa HOM05D009792 ORTHO05D035474 1.4e-06 58.2 136 30.9
BcaC06g36300 Brassica carinata HOM05D000088 ORTHO05D000933 1.9e-06 57.8 240 23.8
Thhalv10027566m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.4e-06 57.4 156 25.0
HanXRQChr02g0048011 Helianthus annuus HOM05D000171 ORTHO05D009073 2.4e-06 57.4 274 21.9
FAN17G1885 Fragaria x ananassa HOM05D006060 ORTHO05D007268 4.1e-06 56.6 163 29.4
C07p05620 Brassica napus HOM05D000171 ORTHO05D000101 5.4e-06 56.2 240 23.3
Carub.0001s2863 Capsella rubella HOM05D000171 ORTHO05D000101 5.4e-06 56.2 149 28.2
FAN22G1852 Fragaria x ananassa HOM05D021789 ORTHO05D025345 5.4e-06 56.2 135 31.1
HanXRQChr04g0095821 Helianthus annuus HOM05D000171 ORTHO05D009073 5.4e-06 56.2 166 27.1
PSO063G5070 Papaver somniferum HOM05D000007 ORTHO05D000676 5.4e-06 56.2 135 28.1
HanXRQChr04g0095931 Helianthus annuus HOM05D000171 ORTHO05D009073 7.0e-06 55.8 166 26.5
PSO700G0281 Papaver somniferum HOM05D007979 ORTHO05D008897 7.0e-06 55.8 171 25.7
AL1G44400 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 9.2e-06 55.5 156 25.6


User provided reference genes

Program Settings