Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_12133 Corylus avellana HOM05D006250 ORTHO05D007107 3.0e-167 592.8 617 100.0
CiPaw.05G146100 Carya illinoinensis HOM05D006250 ORTHO05D007107 1.1e-113 414.8 624 87.2
QL03p066863 Quercus lobata HOM05D006250 ORTHO05D007107 4.7e-112 409.5 620 87.3
COL.COLO4_19523 Corchorus olitorius HOM05D006250 ORTHO05D007107 5.1e-98 362.8 616 82.6
Thecc.02G242000 Theobroma cacao HOM05D006250 ORTHO05D007107 2.9e-93 347.1 620 81.1
GSVIVG01020179001 Vitis vinifera HOM05D006250 ORTHO05D007107 3.8e-93 346.7 630 79.4
Dinv31115 Davidia involucrata HOM05D006250 ORTHO05D007107 3.2e-92 343.6 625 81.0
Ciclev10031015m.g Citrus clementina HOM05D006250 ORTHO05D007107 4.6e-91 339.7 619 80.0
TWI18G0037 Tripterygium wilfordii HOM05D006250 ORTHO05D007107 3.0e-90 337.0 623 79.8
arahy.Tifrunner.gnm1.ann1.ST0DQ2 Arachis hypogaea HOM05D006250 ORTHO05D007107 3.3e-89 333.6 625 76.2
arahy.Tifrunner.gnm1.ann1.11GRU6 Arachis hypogaea HOM05D006250 ORTHO05D007107 1.6e-88 331.3 621 76.5
Manes.05G091350 Manihot esculenta HOM05D006250 ORTHO05D007107 4.0e-87 326.6 621 79.1
FAN22G2376 Fragaria x ananassa HOM05D006250 ORTHO05D007107 1.5e-86 324.7 620 79.0
Gorai.009G344900 Gossypium raimondii HOM05D006250 ORTHO05D007107 7.6e-86 322.4 619 80.0
Hma1.2p1_1049F.1_g251780 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 7.6e-86 322.4 619 79.0
Hma1.2p1_2649F.1_g326135 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 7.6e-86 322.4 619 79.0
Potri.008G193700 Populus trichocarpa HOM05D006250 ORTHO05D007107 1.7e-85 321.2 630 78.6
Gohir.D05G321400 Gossypium hirsutum HOM05D006250 ORTHO05D007107 2.2e-85 320.9 619 79.8
Cc11_g14200 Coffea canephora HOM05D006250 ORTHO05D007107 2.9e-85 320.5 624 78.8
Migut.L01451 Erythranthe guttata HOM05D006250 ORTHO05D007107 3.8e-85 320.1 627 78.0
Lalb_Chr09g0326521 Lupinus albus HOM05D006250 ORTHO05D007107 1.4e-84 318.2 620 77.4
Duzib251G0023 Durio zibethinus HOM05D006250 ORTHO05D007107 3.2e-84 317.0 619 78.7
FAN17G0914 Fragaria x ananassa HOM05D006250 ORTHO05D007107 5.4e-84 316.2 631 77.7
Eucgr.B03367 Eucalyptus grandis HOM05D006250 ORTHO05D007107 1.7e-82 311.2 625 77.6
MD13G1086400 Malus domestica HOM05D006250 ORTHO05D007107 1.7e-82 311.2 623 78.3
Glyma.02G029800 Glycine max HOM05D006250 ORTHO05D007107 5.1e-82 309.7 621 77.6
Gohir.A05G319200 Gossypium hirsutum HOM05D006250 ORTHO05D007107 1.1e-81 308.5 620 78.4
FvH4_4g35070 Fragaria vesca HOM05D006250 ORTHO05D007107 5.6e-81 306.2 620 78.4
Glyma.01G036200 Glycine max HOM05D006250 ORTHO05D007107 7.4e-81 305.8 621 75.5
RcHm_v2.0_Chr4g0444691 Rosa chinensis HOM05D006250 ORTHO05D007107 3.6e-80 303.5 619 78.2
Sopen05g002190 Solanum pennellii HOM05D000912 ORTHO05D001232 1.4e-79 301.6 623 76.4
PGSC0003DMG400015603 Solanum tuberosum HOM05D006250 ORTHO05D007107 1.4e-79 301.6 623 76.4
MSTRG.625 Avicennia marina HOM05D006250 ORTHO05D007107 2.4e-79 300.8 625 75.5
CAN.G1160.10 Capsicum annuum HOM05D006250 ORTHO05D007107 2.4e-79 300.8 620 76.5
Solyc05g006170.4 Solanum lycopersicum HOM05D006250 ORTHO05D007107 4.0e-79 300.1 623 76.4
FAN12G0989 Fragaria x ananassa HOM05D006250 ORTHO05D007107 2.6e-78 297.4 622 73.3
MD16G1085800 Malus domestica HOM05D006250 ORTHO05D007107 9.9e-78 295.4 619 77.2
Sabra08G0147200 Salix brachista HOM05D006250 ORTHO05D007107 2.9e-77 293.9 659 67.2
Aa31LG2G10230 Aethionema arabicum HOM05D006250 ORTHO05D007107 2.4e-76 290.8 627 58.9
Aqoxy3G03090 Aquilegia oxysepala HOM05D006250 ORTHO05D007107 9.3e-76 288.9 629 75.7
Prupe.1G260300 Prunus persica HOM05D006250 ORTHO05D007107 2.7e-75 287.3 627 76.7
Phvul.002G075400 Phaseolus vulgaris HOM05D006250 ORTHO05D007107 4.6e-75 286.6 644 71.0
TPR.G13515 Trifolium pratense HOM05D006250 ORTHO05D007107 1.8e-74 284.6 558 82.3
Nn3g16985 Nelumbo nucifera HOM05D006250 ORTHO05D007107 3.9e-74 283.5 624 68.6
TAR371G0500 Trochodendron aralioides HOM05D006250 ORTHO05D007107 1.1e-73 282.0 624 65.2
VMungo0720G1586 Vigna mungo HOM05D006250 ORTHO05D007107 1.9e-73 281.2 621 75.8
CANSAT01G1928 Cannabis sativa HOM05D006250 ORTHO05D007107 4.8e-72 276.6 620 76.0
VMungo1215G1343 Vigna mungo HOM05D006250 ORTHO05D007107 1.3e-69 268.5 560 80.4
TAR629G0559 Trochodendron aralioides HOM05D006250 ORTHO05D007107 2.9e-69 267.3 601 77.2
MBI18_g16987_MAGBIO Magnolia biondii HOM05D006250 ORTHO05D007107 6.5e-69 266.2 608 75.8
Atru.chr11.1955 Acer truncatum HOM05D006250 ORTHO05D007107 1.4e-68 265.0 604 64.2
SalBow2G3220 Salvia bowleyana HOM05D006250 ORTHO05D007107 1.4e-68 265.0 621 73.3
CDE04G2141 Ceratophyllum demersum HOM05D006250 ORTHO05D007107 2.5e-68 264.2 565 79.6
AUR62039411 Chenopodium quinoa HOM05D006250 ORTHO05D007107 5.5e-68 263.1 583 77.5
AUR62026573 Chenopodium quinoa HOM05D006250 ORTHO05D007107 9.3e-68 262.3 583 77.4
Lj2g0015976 Lotus japonicus HOM05D006250 ORTHO05D007107 2.7e-67 260.8 619 75.1
CSS0049978 Camellia sinensis var. sinensis HOM05D006250 ORTHO05D007107 3.5e-67 260.4 619 74.6
CARHR010650 Cardamine hirsuta HOM05D006250 ORTHO05D007107 1.0e-66 258.8 619 75.6
Lsat_1_v5_gn_3_49600 Lactuca sativa HOM05D006250 ORTHO05D007107 1.3e-66 258.5 620 74.8
PSO832G4030 Papaver somniferum HOM05D006250 ORTHO05D007107 2.3e-66 257.7 631 73.1
BolC8t49010H Brassica oleracea HOM05D006250 ORTHO05D007107 3.0e-66 257.3 586 78.0
PSO063G2741 Papaver somniferum HOM05D006250 ORTHO05D007107 3.0e-66 257.3 631 73.2
BcaC07g38569 Brassica carinata HOM05D006250 ORTHO05D007107 1.5e-65 255.0 624 74.8
BraA08t35306Z Brassica rapa HOM05D006250 ORTHO05D007107 2.5e-65 254.2 619 75.6
THA.LOC104816735 Tarenaya hassleriana HOM05D006250 ORTHO05D007107 1.2e-62 245.4 617 74.7
Lj6A800T42 Lonicera japonica HOM05D006250 ORTHO05D007107 1.5e-62 245.0 636 71.9
Actinidia15003 Actinidia chinensis HOM05D006250 ORTHO05D007107 7.6e-62 242.7 658 69.8
EL10Ac6g13760 Beta vulgaris HOM05D006250 ORTHO05D007107 7.6e-62 242.7 551 80.0
FAN07G1033 Fragaria x ananassa HOM05D006250 ORTHO05D007107 3.8e-61 240.4 265 56.2
Medtr5g035590 Medicago truncatula HOM05D006250 ORTHO05D007107 5.0e-61 240.0 619 73.2
Carub.0001s0994 Capsella rubella HOM05D006250 ORTHO05D007107 6.5e-61 239.6 621 73.6
Sp1g09140 Schrenkiella parvula HOM05D006250 ORTHO05D007107 1.4e-60 238.4 621 74.6
SGA_v2.0_scaffold8G04258 Striga asiatica HOM05D006250 ORTHO05D007107 1.4e-60 238.4 669 68.9
Thhalv10007114m.g Eutrema salsugineum HOM05D006250 ORTHO05D007107 2.5e-60 237.7 623 74.5
Psat4g140960 Pisum sativum HOM05D006250 ORTHO05D007107 2.1e-59 234.6 249 55.4
BcaC07g38607 Brassica carinata HOM05D006250 ORTHO05D007107 2.7e-59 234.2 623 73.7
Ca_18091_v3 Cicer arietinum L. HOM05D006250 ORTHO05D007107 1.8e-58 231.5 623 72.9
BcaC05g24872 Brassica carinata HOM05D006250 ORTHO05D007107 5.1e-58 229.9 617 73.6
C05p08800 Brassica napus HOM05D006250 ORTHO05D007107 1.1e-57 228.8 617 73.4
BolC5t29626H Brassica oleracea HOM05D006250 ORTHO05D007107 1.1e-57 228.8 617 73.4
A06p07280 Brassica napus HOM05D006250 ORTHO05D007107 5.7e-57 226.5 617 73.3
BraA06t23934Z Brassica rapa HOM05D006250 ORTHO05D007107 5.7e-57 226.5 617 73.3
ClCG09G022110 Citrullus lanatus HOM05D006250 ORTHO05D007107 1.3e-56 225.3 268 52.2
unitig_749.g13267 Utricularia gibba HOM05D006250 ORTHO05D007107 4.8e-56 223.4 543 67.4
AL1G21310 Arabidopsis lyrata HOM05D006250 ORTHO05D007107 6.3e-56 223.0 620 72.6
HanXRQChr10g0288221 Helianthus annuus HOM05D006250 ORTHO05D007107 6.3e-56 223.0 244 53.7
C08p13750 Brassica napus HOM05D006250 ORTHO05D007107 2.4e-55 221.1 597 75.4
A08p33910 Brassica napus HOM05D006250 ORTHO05D007107 4.1e-55 220.3 620 73.5
AT1G10510 Arabidopsis thaliana HOM05D006250 ORTHO05D007107 1.2e-54 218.8 552 78.3
Ah.03g132320 Amaranthus hybridus HOM05D006250 ORTHO05D007107 4.5e-54 216.9 593 61.9
Hund05952 Selenicereus undatus HOM05D006250 ORTHO05D007107 5.9e-54 216.5 618 71.0
Dinv24907 Davidia involucrata HOM05D006250 ORTHO05D007107 7.7e-54 216.1 471 89.2
BcaC05g24932 Brassica carinata HOM05D006250 ORTHO05D007107 2.2e-53 214.5 540 79.4
PGR102G1255 Punica granatum HOM05D006250 ORTHO05D007107 1.1e-52 212.2 489 85.3
ECA246G3811 Erigeron canadensis HOM05D006250 ORTHO05D007107 2.5e-52 211.1 238 51.7
Os06g0237502 Oryza sativa ssp. japonica HOM05D006250 ORTHO05D007107 2.5e-52 211.1 550 74.7
Nitab4.5_0005722g0060 Nicotiana tabacum HOM05D006250 ORTHO05D007107 2.1e-51 208.0 244 50.4
Sed0020226 Sechium edule HOM05D006250 ORTHO05D007107 2.1e-51 208.0 226 54.0
MELO3C002989.2 Cucumis melo HOM05D006250 ORTHO05D007107 1.4e-50 205.3 224 53.1
ATR0829G105 Amborella trichopoda HOM05D006250 ORTHO05D007107 2.3e-50 204.5 501 81.0
CsaV3_5G025030 Cucumis sativus L. HOM05D006250 ORTHO05D007107 3.9e-50 203.8 224 53.1
DCAR_026556 Daucus carota HOM05D006250 ORTHO05D007107 2.6e-46 191.0 164 62.8
HPP92_017346 Vanilla planifolia HOM05D006250 ORTHO05D007107 3.8e-45 187.2 573 72.4
Zm00001eb371900 Zea mays HOM05D006250 ORTHO05D007107 1.2e-43 182.2 565 70.8
Hma1.2p1_1049F.1_g251790 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 1.0e-42 179.1 192 54.7
Hma1.2p1_2649F.1_g326133 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 1.0e-42 179.1 192 54.7
Sc11g0001380 Simmondsia chinensis HOM05D006250 ORTHO05D007107 9.7e-41 172.6 221 48.0
Peaxi162Scf00421g00828 Petunia axillaris HOM05D006250 ORTHO05D007107 1.3e-40 172.2 549 73.8
Lsat_1_v5_gn_4_95161 Lactuca sativa HOM05D006250 ORTHO05D007107 1.4e-39 168.7 140 62.1
vmacro16283 Vaccinium macrocarpon HOM05D006250 ORTHO05D007107 3.8e-37 160.6 121 66.1
Rhsim12G0124700 Rhododendron simsii HOM05D006250 ORTHO05D007107 3.7e-32 144.1 182 48.4
Nitab4.5_0000257g0160 Nicotiana tabacum HOM05D006250 ORTHO05D007107 2.9e-29 134.4 250 38.4
SEGI_23986 Sequoiadendron giganteum HOM05D006250 ORTHO05D007107 5.0e-29 133.7 616 64.8
Hma1.2p1_2649F.1_g326137 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 5.5e-28 130.2 243 89.3
TAR629G0016 Trochodendron aralioides HOM05D006250 ORTHO05D007107 7.0e-23 113.2 407 67.6
vmacro16284 Vaccinium macrocarpon HOM05D006250 ORTHO05D007107 2.2e-21 108.2 182 41.2
AagrBONN_evm.TU.Sc2ySwM_344.3920 Anthoceros agrestis HOM05D006250 ORTHO05D007107 7.5e-17 93.2 356 62.4
DCAR_026558 Daucus carota HOM05D006250 ORTHO05D007107 2.2e-16 91.7 221 34.4
SEGI_34898 Sequoiadendron giganteum HOM05D006250 ORTHO05D007107 4.9e-16 90.5 234 82.5
Lsat_1_v5_gn_4_84060 Lactuca sativa HOM05D006250 ORTHO05D007107 6.3e-16 90.1 64 67.2
Pp3c14_24560 Physcomitrium patens HOM05D006250 ORTHO05D007107 1.7e-13 82.0 514 68.7
Pp3c14_24566 Physcomitrium patens HOM05D006250 ORTHO05D007107 1.7e-13 82.0 514 68.7
SMO116G0024 Selaginella moellendorffii HOM05D006250 ORTHO05D007107 6.6e-13 80.1 467 76.7
Mapoly0090s0039 Marchantia polymorpha HOM05D006250 ORTHO05D007107 1.8e-10 72.0 564 65.2
CBR_g61650 Chara braunii HOM05D006250 ORTHO05D007107 2.0e-09 68.6 243 75.3
Cpa.g.sc367.5 Carica papaya HOM05D006250 ORTHO05D007107 8.3e-08 63.2 123 40.7


User provided reference genes

Program Settings