Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_12044 Corylus avellana HOM05D004279 ORTHO05D004979 5.3e-66 254.2 130 100.0
Haze_01531 Corylus avellana HOM05D004279 ORTHO05D004979 2.7e-49 198.7 113 90.3
Haze_09505 Corylus avellana HOM05D004279 ORTHO05D004979 1.1e-47 193.4 113 89.4
Cfa020528 Carpinus fangiana HOM05D004279 ORTHO05D004979 2.5e-47 192.2 113 88.5
Haze_10444 Corylus avellana HOM05D004279 ORTHO05D004979 1.9e-42 176.0 99 93.9
QL08p019074 Quercus lobata HOM05D004279 ORTHO05D004979 2.8e-38 162.2 113 71.7
CiPaw.12G122100 Carya illinoinensis HOM05D004279 ORTHO05D004979 1.3e-35 153.3 112 72.3
CiPaw.11G174600 Carya illinoinensis HOM05D004279 ORTHO05D004979 4.1e-34 148.3 113 71.7
CANSAT11G2237 Cannabis sativa HOM05D004279 ORTHO05D004979 5.6e-31 137.9 110 63.6
Glyma.06G249400 Glycine max HOM05D004279 ORTHO05D004979 9.5e-31 137.1 128 56.2
Gohir.D01G054400 Gossypium hirsutum HOM05D004279 ORTHO05D004979 6.2e-30 134.4 109 65.1
Gorai.002G074300 Gossypium raimondii HOM05D004279 ORTHO05D004979 6.2e-30 134.4 109 65.1
Cpa.g.sc80.101 Carica papaya HOM05D004279 ORTHO05D004979 1.8e-29 132.9 109 66.1
Thecc.07G074500 Theobroma cacao HOM05D004279 ORTHO05D004979 3.1e-29 132.1 109 63.3
MELO3C018223.2 Cucumis melo HOM05D004279 ORTHO05D004979 4.0e-29 131.7 111 64.0
COL.COLO4_09461 Corchorus olitorius HOM05D004279 ORTHO05D004979 5.2e-29 131.3 109 63.3
Duzib213G0014 Durio zibethinus HOM05D004279 ORTHO05D004979 5.2e-29 131.3 109 62.4
CsaV3_3G044480 Cucumis sativus L. HOM05D004279 ORTHO05D004979 8.9e-29 130.6 111 63.1
Gohir.A01G067200 Gossypium hirsutum HOM05D004279 ORTHO05D004979 8.9e-29 130.6 109 64.2
PGR031G2155 Punica granatum HOM05D004279 ORTHO05D004979 1.5e-28 129.8 110 65.5
THA.LOC104810491 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 1.5e-28 129.8 109 65.1
TWI38G1973 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 1.5e-28 129.8 113 60.2
Glyma.12G220600 Glycine max HOM05D004279 ORTHO05D004979 2.6e-28 129.0 113 62.8
Glyma.13G280900 Glycine max HOM05D004279 ORTHO05D004979 2.6e-28 129.0 113 63.7
ClCG11G018340 Citrullus lanatus HOM05D004279 ORTHO05D004979 4.4e-28 128.3 111 62.2
A01p38550 Brassica napus HOM05D004279 ORTHO05D004979 5.8e-28 127.9 112 63.4
BraA01t03905Z Brassica rapa HOM05D004279 ORTHO05D004979 5.8e-28 127.9 112 63.4
Glyma.12G148500 Glycine max HOM05D004279 ORTHO05D004979 5.8e-28 127.9 128 56.2
Actinidia35269 Actinidia chinensis HOM05D004279 ORTHO05D004979 7.5e-28 127.5 112 61.6
Dinv08329 Davidia involucrata HOM05D004279 ORTHO05D004979 7.5e-28 127.5 112 62.5
TWI39G0076 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 7.5e-28 127.5 112 59.8
BcaC09g48518 Brassica carinata HOM05D004279 ORTHO05D004979 9.9e-28 127.1 112 61.6
A05p33880 Brassica napus HOM05D004279 ORTHO05D004979 9.9e-28 127.1 112 60.7
C01p48920 Brassica napus HOM05D004279 ORTHO05D004979 9.9e-28 127.1 112 61.6
BolC1t04855H Brassica oleracea HOM05D004279 ORTHO05D004979 9.9e-28 127.1 112 61.6
AL3G28110 Arabidopsis lyrata HOM05D004279 ORTHO05D004979 1.7e-27 126.3 112 61.6
CARHR090590 Cardamine hirsuta HOM05D004279 ORTHO05D004979 1.7e-27 126.3 112 61.6
Thhalv10021257m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 1.7e-27 126.3 112 61.6
Actinidia18754 Actinidia chinensis HOM05D002936 ORTHO05D004979 2.2e-27 125.9 112 62.5
Lj3g0025503 Lotus japonicus HOM05D004279 ORTHO05D004979 2.9e-27 125.6 115 59.1
Lalb_Chr25g0286631 Lupinus albus HOM05D004279 ORTHO05D004979 2.9e-27 125.6 115 61.7
BcaC05g28964 Brassica carinata HOM05D004279 ORTHO05D004979 3.7e-27 125.2 112 59.8
C05p51590 Brassica napus HOM05D004279 ORTHO05D004979 3.7e-27 125.2 112 59.8
BolC5t33846H Brassica oleracea HOM05D004279 ORTHO05D004979 3.7e-27 125.2 112 59.8
Carub.0003s1526 Capsella rubella HOM05D004279 ORTHO05D004979 3.7e-27 125.2 112 60.7
Nn1g06689 Nelumbo nucifera HOM05D004279 ORTHO05D004979 3.7e-27 125.2 109 61.5
BraA05t22210Z Brassica rapa HOM05D004279 ORTHO05D004979 4.9e-27 124.8 112 59.8
Haze_13283 Corylus avellana HOM05D004279 ORTHO05D004979 4.9e-27 124.8 89 79.8
Duzib268G0928 Durio zibethinus HOM05D004279 ORTHO05D004979 4.9e-27 124.8 109 60.6
BcaB06g29588 Brassica carinata HOM05D004279 ORTHO05D004979 6.4e-27 124.4 110 61.8
Eucgr.F01088 Eucalyptus grandis HOM05D004279 ORTHO05D004979 6.4e-27 124.4 110 60.9
Phvul.011G148200 Phaseolus vulgaris HOM05D004279 ORTHO05D004979 6.4e-27 124.4 128 55.5
Sp3g13790 Schrenkiella parvula HOM05D004279 ORTHO05D004979 8.3e-27 124.0 112 59.8
AT3G15530 Arabidopsis thaliana HOM05D004279 ORTHO05D004979 1.1e-26 123.6 112 59.8
Ca_01814_v3 Cicer arietinum L. HOM05D004279 ORTHO05D004979 1.1e-26 123.6 113 61.1
Ca_30536_v3 Cicer arietinum L. HOM05D004279 ORTHO05D004979 1.1e-26 123.6 113 61.1
Manes.03G114800 Manihot esculenta HOM05D004279 ORTHO05D004979 1.1e-26 123.6 115 57.4
Aqoxy4G01310 Aquilegia oxysepala HOM05D004279 ORTHO05D004979 1.4e-26 123.2 109 64.2
Gorai.009G432300 Gossypium raimondii HOM05D004279 ORTHO05D004979 1.4e-26 123.2 109 58.7
Phvul.005G085300 Phaseolus vulgaris HOM05D004279 ORTHO05D004979 1.4e-26 123.2 113 61.9
BcaB04g20920 Brassica carinata HOM05D004279 ORTHO05D004979 1.9e-26 122.9 109 60.6
Dinv22371 Davidia involucrata HOM05D004279 ORTHO05D004979 1.9e-26 122.9 112 62.5
Gohir.A04G027700 Gossypium hirsutum HOM05D004279 ORTHO05D004979 1.9e-26 122.9 109 56.9
Gohir.D05G360400 Gossypium hirsutum HOM05D004279 ORTHO05D004979 1.9e-26 122.9 109 57.8
Manes.15G084500 Manihot esculenta HOM05D004279 ORTHO05D004979 1.9e-26 122.9 115 56.5
Eucgr.F03342 Eucalyptus grandis HOM05D004279 ORTHO05D004979 2.4e-26 122.5 122 55.7
VMungo1127G1925 Vigna mungo HOM05D004279 ORTHO05D004979 2.4e-26 122.5 128 54.7
TPR.G38955 Trifolium pratense HOM05D004279 ORTHO05D004979 3.2e-26 122.1 113 60.2
VMungo1080G0833 Vigna mungo HOM05D004279 ORTHO05D004979 3.2e-26 122.1 113 61.9
Psat4g016400 Pisum sativum HOM05D004279 ORTHO05D004979 5.4e-26 121.3 113 60.2
CSS0001500 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 7.1e-26 120.9 112 59.8
CSS0022309 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 7.1e-26 120.9 112 59.8
Haze_06332 Corylus avellana HOM05D004279 ORTHO05D004979 2.1e-25 119.4 134 59.0
Lalb_Chr01g0016991 Lupinus albus HOM05D004279 ORTHO05D004979 2.1e-25 119.4 115 57.4
Aa31LG8G2770 Aethionema arabicum HOM05D004279 ORTHO05D004979 3.5e-25 118.6 112 58.0
Lj1A851T62 Lonicera japonica HOM05D004279 ORTHO05D004979 3.5e-25 118.6 109 59.6
Atru.chr2.2813 Acer truncatum HOM05D004279 ORTHO05D004979 4.6e-25 118.2 104 58.7
Hma1.2p1_1143F.1_g261130 Hydrangea macrophylla HOM05D004279 ORTHO05D004979 6.0e-25 117.9 112 58.9
BolC2t07801H Brassica oleracea HOM05D004279 ORTHO05D004979 7.8e-25 117.5 109 60.6
TAR626G0357 Trochodendron aralioides HOM05D004279 ORTHO05D004979 7.8e-25 117.5 109 58.7
A02p10310 Brassica napus HOM05D004279 ORTHO05D004979 1.0e-24 117.1 109 60.6
GSVIVG01014410001 Vitis vinifera HOM05D004279 ORTHO05D004979 1.0e-24 117.1 112 58.9
C02p17040 Brassica napus HOM05D004279 ORTHO05D004979 1.3e-24 116.7 109 60.6
BraA02t06098Z Brassica rapa HOM05D004279 ORTHO05D004979 1.7e-24 116.3 109 59.6
Ciclev10009067m.g Citrus clementina HOM05D004279 ORTHO05D004979 1.7e-24 116.3 104 57.7
Nn1g03957 Nelumbo nucifera HOM05D004279 ORTHO05D004979 1.7e-24 116.3 109 56.9
Ah.06g183670 Amaranthus hybridus HOM05D004279 ORTHO05D004979 3.0e-24 115.5 112 58.9
Medtr2g080130 Medicago truncatula HOM05D004279 ORTHO05D004979 3.0e-24 115.5 113 59.3
Hma1.2p1_1274F.1_g271930 Hydrangea macrophylla HOM05D004279 ORTHO05D004979 3.9e-24 115.2 115 54.8
Oeu055672.1 Olea europaea HOM05D004279 ORTHO05D004979 3.9e-24 115.2 109 57.8
Prupe.4G187700 Prunus persica HOM05D004279 ORTHO05D004979 3.9e-24 115.2 108 54.6
Aa31LG3G10340 Aethionema arabicum HOM05D004279 ORTHO05D004979 5.1e-24 114.8 109 58.7
AT5G54400 Arabidopsis thaliana HOM05D004279 ORTHO05D004979 5.1e-24 114.8 110 57.3
MSTRG.12925 Avicennia marina HOM05D004279 ORTHO05D004979 5.1e-24 114.8 113 58.4
DCAR_009977 Daucus carota HOM05D004279 ORTHO05D004979 5.1e-24 114.8 112 58.0
Thhalv10014468m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 6.6e-24 114.4 109 58.7
FvH4_3g20760 Fragaria vesca HOM05D004279 ORTHO05D004979 6.6e-24 114.4 112 55.4
FAN11G1457 Fragaria x ananassa HOM05D004279 ORTHO05D004979 6.6e-24 114.4 112 55.4
FAN16G2997 Fragaria x ananassa HOM05D004279 ORTHO05D004979 6.6e-24 114.4 112 55.4
PSO210G3340 Papaver somniferum HOM05D004279 ORTHO05D004979 6.6e-24 114.4 109 56.9
Sed0000911 Sechium edule HOM05D004279 ORTHO05D004979 6.6e-24 114.4 111 55.0
PSO832G3402 Papaver somniferum HOM05D004279 ORTHO05D004979 8.6e-24 114.0 109 56.9
AL8G29740 Arabidopsis lyrata HOM05D004279 ORTHO05D004979 1.9e-23 112.8 110 56.4
CARHR267680 Cardamine hirsuta HOM05D004279 ORTHO05D004979 1.9e-23 112.8 109 56.9
Sabra16G0266200 Salix brachista HOM05D004279 ORTHO05D004979 1.9e-23 112.8 112 57.1
Rhsim04G0018800 Rhododendron simsii HOM05D004279 ORTHO05D004979 2.5e-23 112.5 112 59.8
Sp6g16410 Schrenkiella parvula HOM05D004279 ORTHO05D004979 2.5e-23 112.5 109 58.7
Lsat_1_v5_gn_5_7280 Lactuca sativa HOM05D004279 ORTHO05D004979 3.3e-23 112.1 109 58.7
Nitab4.5_0000815g0050 Nicotiana tabacum HOM05D004279 ORTHO05D004979 3.3e-23 112.1 109 57.8
RcHm_v2.0_Chr5g0034991 Rosa chinensis HOM05D004279 ORTHO05D004979 3.3e-23 112.1 112 52.7
FAN21G3274 Fragaria x ananassa HOM05D004279 ORTHO05D004979 4.3e-23 111.7 112 54.5
FAN25G2565 Fragaria x ananassa HOM05D004279 ORTHO05D004979 4.3e-23 111.7 112 54.5
BcaB05g22132 Brassica carinata HOM05D004279 ORTHO05D004979 5.6e-23 111.3 109 57.8
Potri.001G405200 Populus trichocarpa HOM05D004279 ORTHO05D004979 5.6e-23 111.3 112 56.2
THA.LOC104818054 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 5.6e-23 111.3 109 58.7
MSTRG.14375 Avicennia marina HOM05D004279 ORTHO05D004979 2.1e-22 109.4 112 55.4
Carub.0008s1473 Capsella rubella HOM05D004279 ORTHO05D004979 2.1e-22 109.4 110 56.4
CSS0025917 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 3.6e-22 108.6 112 55.4
CSS0045555 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 3.6e-22 108.6 112 55.4
Peaxi162Scf01111g00012 Petunia axillaris HOM05D004279 ORTHO05D004979 4.7e-22 108.2 110 55.5
Potri.011G128300 Populus trichocarpa HOM05D004279 ORTHO05D004979 4.7e-22 108.2 112 52.7
MD11G1239200 Malus domestica HOM05D004279 ORTHO05D004979 6.2e-22 107.8 111 50.5
Nitab4.5_0009177g0010 Nicotiana tabacum HOM05D004279 ORTHO05D004979 6.2e-22 107.8 110 56.4
Oeu008023.1 Olea europaea HOM05D004279 ORTHO05D004979 6.2e-22 107.8 113 54.9
SGA_v2.0_scaffold9G04950 Striga asiatica HOM05D004279 ORTHO05D004979 6.2e-22 107.8 113 57.5
AUR62029338 Chenopodium quinoa HOM05D004279 ORTHO05D004979 8.1e-22 107.5 112 57.1
Solyc07g063460.3 Solanum lycopersicum HOM05D004279 ORTHO05D004979 8.1e-22 107.5 110 55.5
Sopen07g031640 Solanum pennellii HOM05D004279 ORTHO05D004979 8.1e-22 107.5 110 55.5
Cc05_g12550 Coffea canephora HOM05D004279 ORTHO05D004979 1.4e-21 106.7 109 56.0
Sed0021920 Sechium edule HOM05D004279 ORTHO05D004979 1.4e-21 106.7 112 52.7
HanXRQChr05g0156561 Helianthus annuus HOM05D004279 ORTHO05D004979 1.8e-21 106.3 112 53.6
MBI02_g29384_MAGBIO Magnolia biondii HOM05D004279 ORTHO05D004979 1.8e-21 106.3 111 53.2
SHI28037 Sapria himalayana HOM05D004279 ORTHO05D004979 2.4e-21 105.9 107 51.4
CAN.G162.92 Capsicum annuum HOM05D004279 ORTHO05D004979 3.1e-21 105.5 110 52.7
Migut.H01911 Erythranthe guttata HOM05D004279 ORTHO05D004979 3.1e-21 105.5 112 54.5
HanXRQChr08g0235651 Helianthus annuus HOM05D004279 ORTHO05D004979 3.1e-21 105.5 112 54.5
PGSC0003DMG400019253 Solanum tuberosum HOM05D004279 ORTHO05D004979 3.1e-21 105.5 110 53.6
EL10Ac4g08091 Beta vulgaris HOM05D004279 ORTHO05D004979 4.0e-21 105.1 106 55.7
AUR62015623 Chenopodium quinoa HOM05D004279 ORTHO05D004979 4.0e-21 105.1 112 56.2
DCAR_022481 Daucus carota HOM05D004279 ORTHO05D004979 6.8e-21 104.4 109 54.1
unitig_0.g2258 Utricularia gibba HOM05D004279 ORTHO05D004979 8.9e-21 104.0 113 53.1
SalBow7G1458 Salvia bowleyana HOM05D004279 ORTHO05D004979 1.5e-20 103.2 113 56.6
Lsat_1_v5_gn_7_105700 Lactuca sativa HOM05D004279 ORTHO05D004979 2.0e-20 102.8 112 53.6
ECA246G0789 Erigeron canadensis HOM05D004279 ORTHO05D004979 3.4e-20 102.1 109 55.0
MD03G1221800 Malus domestica HOM05D004279 ORTHO05D004979 4.4e-20 101.7 108 50.9
SGA_v2.0_scaffold73G24305 Striga asiatica HOM05D004279 ORTHO05D004979 5.8e-20 101.3 116 50.0
Sc16g0006820 Simmondsia chinensis HOM05D004279 ORTHO05D004979 9.9e-20 100.5 113 50.4
ECA236G3281 Erigeron canadensis HOM05D004279 ORTHO05D004979 1.3e-19 100.1 109 52.3
HPP92_016704 Vanilla planifolia HOM05D004279 ORTHO05D004979 4.2e-18 95.1 120 47.5
BcaC03g14314 Brassica carinata HOM05D004279 ORTHO05D004979 7.1e-18 94.4 97 57.7
SHI18877 Sapria himalayana HOM05D004279 ORTHO05D004979 1.2e-17 93.6 100 46.0
THA.LOC104799915 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 2.1e-17 92.8 111 51.4
SHI27994 Sapria himalayana HOM05D004279 ORTHO05D004979 1.0e-16 90.5 102 44.1
HanXRQChr13g0386401 Helianthus annuus HOM05D004279 ORTHO05D004979 1.7e-16 89.7 105 48.6
TAR624G0257 Trochodendron aralioides HOM05D004279 ORTHO05D004979 9.6e-15 84.0 91 51.6
QL06p019554 Quercus lobata HOM05D004279 ORTHO05D004979 1.3e-14 83.6 63 68.3
SHI27902 Sapria himalayana HOM05D004279 ORTHO05D004979 5.8e-12 74.7 98 41.8
ATR0693G409 Amborella trichopoda HOM05D004279 ORTHO05D004979 2.8e-06 55.8 112 33.9
Mapoly0019s0089 Marchantia polymorpha HOM05D004279 ORTHO05D004979 3.6e-06 55.5 114 37.7


User provided reference genes

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