Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_11993 Corylus avellana HOM05D001860 ORTHO05D004239 5.5e-95 350.9 170 100.0
Duzib268G0034 Durio zibethinus HOM05D001860 ORTHO05D004239 5.5e-63 244.6 134 84.3
arahy.Tifrunner.gnm1.ann1.RS14VD Arachis hypogaea HOM05D001860 ORTHO05D004239 4.0e-61 238.4 140 78.6
arahy.Tifrunner.gnm1.ann1.A2Z21V Arachis hypogaea HOM05D001860 ORTHO05D004239 3.7e-59 231.9 132 81.1
Gorai.013G087000 Gossypium raimondii HOM05D001860 ORTHO05D004922 5.4e-58 228.0 134 79.1
Ca_04821_v3 Cicer arietinum L. HOM05D001860 ORTHO05D004239 2.9e-56 222.2 141 73.0
Medtr5g041750 Medicago truncatula HOM05D001860 ORTHO05D004239 1.1e-55 220.3 137 75.9
Eucgr.B03212 Eucalyptus grandis HOM05D001860 ORTHO05D004239 5.6e-55 218.0 133 78.9
ClCG05G024140 Citrullus lanatus HOM05D001860 ORTHO05D004239 7.3e-55 217.6 145 71.7
CsaV3_5G032880 Cucumis sativus L. HOM05D001860 ORTHO05D004239 9.5e-55 217.2 129 79.1
Migut.L01274 Erythranthe guttata HOM05D001860 ORTHO05D004239 4.0e-53 211.8 133 73.7
ECA233G2043 Erigeron canadensis HOM05D001860 ORTHO05D004239 1.2e-52 210.3 133 72.2
Rhsim12G0064500 Rhododendron simsii HOM05D001860 ORTHO05D004239 1.2e-52 210.3 136 71.3
QL03p068530 Quercus lobata HOM05D001860 ORTHO05D004239 7.5e-52 207.6 108 89.8
Psat2g116800 Pisum sativum HOM05D001860 ORTHO05D004239 9.8e-52 207.2 139 74.1
Hma1.2p1_1079F.1_g254980 Hydrangea macrophylla HOM05D001860 ORTHO05D004239 1.3e-51 206.8 132 74.2
vmacro01266 Vaccinium macrocarpon HOM05D001860 ORTHO05D004239 1.7e-51 206.5 132 71.2
Sed0006733 Sechium edule HOM05D001860 ORTHO05D004239 8.3e-51 204.1 128 77.3
TWI79G1540 Tripterygium wilfordii HOM05D001860 ORTHO05D004239 8.3e-51 204.1 140 72.9
Prupe.1G276800 Prunus persica HOM05D001860 ORTHO05D004239 5.9e-49 198.0 120 78.3
SGA_v2.0_scaffold172G38958 Striga asiatica HOM05D001860 ORTHO05D004239 1.0e-48 197.2 151 65.6
Nitab4.5_0004623g0030 Nicotiana tabacum HOM05D001860 ORTHO05D004239 1.3e-48 196.8 139 69.8
FAN22G1600 Fragaria x ananassa HOM05D001860 ORTHO05D004922 1.7e-48 196.4 140 67.1
Lsat_1_v5_gn_3_52080 Lactuca sativa HOM05D001860 ORTHO05D004239 1.7e-48 196.4 134 70.1
FAN12G1253 Fragaria x ananassa HOM05D001860 ORTHO05D004922 2.3e-48 196.1 140 68.6
Lsat_1_v5_gn_3_52060 Lactuca sativa HOM05D001860 ORTHO05D004239 3.0e-48 195.7 125 72.8
FAN07G2810 Fragaria x ananassa HOM05D001860 ORTHO05D004922 1.1e-47 193.7 131 71.0
Actinidia33208 Actinidia chinensis HOM05D001860 ORTHO05D004239 5.6e-47 191.4 128 69.5
Lj2g0002980 Lotus japonicus HOM05D001860 ORTHO05D004239 7.3e-47 191.0 109 81.7
Ciclev10031680m.g Citrus clementina HOM05D001860 ORTHO05D004239 8.0e-46 187.6 107 81.3
PGR119G0060 Punica granatum HOM05D001860 ORTHO05D004239 1.4e-45 186.8 138 66.7
Glyma.01G050400 Glycine max HOM05D001860 ORTHO05D004239 1.8e-45 186.4 107 80.4
TPR.G39239 Trifolium pratense HOM05D001860 ORTHO05D004239 2.6e-44 182.6 140 66.4
MD13G1070100 Malus domestica HOM05D001860 ORTHO05D004239 9.8e-44 180.6 111 77.5
Glyma.02G109200 Glycine max HOM05D001860 ORTHO05D004239 1.3e-43 180.3 107 77.6
MD16G1070500 Malus domestica HOM05D001860 ORTHO05D004239 1.3e-43 180.3 111 77.5
Gohir.A13G076600 Gossypium hirsutum HOM05D001860 ORTHO05D004239 2.2e-43 179.5 107 76.6
Phvul.002G083400 Phaseolus vulgaris HOM05D001860 ORTHO05D004239 3.7e-43 178.7 107 74.8
Gohir.D13G076300 Gossypium hirsutum HOM05D001860 ORTHO05D004239 4.9e-43 178.3 107 76.6
Lj6A786T63 Lonicera japonica HOM05D001860 ORTHO05D004239 6.4e-43 177.9 107 77.6
Dinv34137 Davidia involucrata HOM05D001860 ORTHO05D004239 1.1e-42 177.2 107 76.6
FAN17G3114 Fragaria x ananassa HOM05D001860 ORTHO05D004922 1.1e-42 177.2 108 80.6
Oeu028274.1 Olea europaea HOM05D001860 ORTHO05D004239 3.5e-41 172.2 131 67.2
CANSAT64G2374 Cannabis sativa HOM05D001860 ORTHO05D004239 6.0e-41 171.4 107 74.8
VMungo1215G3190 Vigna mungo HOM05D001860 ORTHO05D004239 1.0e-40 170.6 102 76.5
ECA246G2415 Erigeron canadensis HOM05D001860 ORTHO05D004239 8.6e-40 167.5 107 71.0
MSTRG.714 Avicennia marina HOM05D001860 ORTHO05D004239 1.1e-39 167.2 106 72.6
Actinidia31905 Actinidia chinensis HOM05D001860 ORTHO05D004922 1.5e-39 166.8 122 63.9
HanXRQChr17g0545271 Helianthus annuus HOM05D001860 ORTHO05D004239 3.3e-39 165.6 107 71.0
Actinidia19882 Actinidia chinensis HOM05D001860 ORTHO05D004239 2.1e-38 162.9 119 61.3
Cfa008963 Carpinus fangiana HOM05D001860 ORTHO05D004922 4.7e-38 161.8 78 100.0
Peaxi162Scf00222g00063 Petunia axillaris HOM05D001860 ORTHO05D004239 4.7e-38 161.8 106 69.8
Sopen05g003680 Solanum pennellii HOM05D001860 ORTHO05D004239 4.7e-38 161.8 106 69.8
PGSC0003DMG400018432 Solanum tuberosum HOM05D001860 ORTHO05D004239 4.7e-38 161.8 106 69.8
HanXRQChr08g0210801 Helianthus annuus HOM05D001860 ORTHO05D004239 6.2e-38 161.4 107 67.3
Nitab4.5_0000040g0150 Nicotiana tabacum HOM05D001860 ORTHO05D004239 1.8e-37 159.8 107 71.0
TWI75G1461 Tripterygium wilfordii HOM05D001860 ORTHO05D004239 1.8e-37 159.8 107 72.9
CAN.G1596.4 Capsicum annuum HOM05D001860 ORTHO05D004239 4.0e-37 158.7 106 68.9
AUR62032809 Chenopodium quinoa HOM05D001860 ORTHO05D004239 8.3e-35 151.0 107 66.4
TWI31G0976 Tripterygium wilfordii HOM05D001860 ORTHO05D004239 1.1e-34 150.6 107 69.2
Cpa.g.sc350.3 Carica papaya HOM05D001860 ORTHO05D004239 1.9e-34 149.8 108 69.4
TAR374G0160 Trochodendron aralioides HOM05D000974 ORTHO05D004239 3.2e-34 149.1 114 66.7
AUR62005815 Chenopodium quinoa HOM05D001860 ORTHO05D004239 5.4e-34 148.3 108 64.8
EL10Ac6g13235 Beta vulgaris HOM05D001860 ORTHO05D004239 1.2e-33 147.1 107 65.4
THA.LOC104805168 Tarenaya hassleriana HOM05D001860 ORTHO05D004239 2.7e-33 146.0 137 54.7
TAR622G0370 Trochodendron aralioides HOM05D001860 ORTHO05D004239 4.6e-33 145.2 108 67.6
Actinidia12295 Actinidia chinensis HOM05D001860 ORTHO05D004239 5.1e-32 141.7 106 65.1
Sc11g0002050 Simmondsia chinensis HOM05D001860 ORTHO05D004239 1.1e-31 140.6 107 65.4
Hund25223 Selenicereus undatus HOM05D001860 ORTHO05D004239 3.6e-30 135.6 105 61.0
TAR315G0003 Trochodendron aralioides HOM05D001860 ORTHO05D004239 6.2e-30 134.8 108 63.9
Thecc.02G343600 Theobroma cacao HOM05D001860 ORTHO05D004239 1.8e-29 133.3 111 59.5
MBI05_g10767_MAGBIO Magnolia biondii HOM05D001860 ORTHO05D004239 1.2e-28 130.6 118 60.2
Manes.05G104000 Manihot esculenta HOM05D001860 ORTHO05D004239 2.4e-26 122.9 111 61.3
Duzib251G0636 Durio zibethinus HOM05D001860 ORTHO05D004239 3.2e-26 122.5 115 57.4
Aqoxy3G03435 Aquilegia oxysepala HOM05D001860 ORTHO05D004239 4.6e-25 118.6 108 58.3
ATR0564G267 Amborella trichopoda HOM05D001860 ORTHO05D004239 1.3e-24 117.1 102 61.8
Zm00001eb223270 Zea mays HOM05D001860 ORTHO05D004239 5.1e-24 115.2 132 50.8
Os10g0406200 Oryza sativa ssp. japonica HOM05D001860 ORTHO05D004239 6.6e-24 114.8 133 50.4
Dinv14593 Davidia involucrata HOM05D001860 ORTHO05D004239 3.3e-23 112.5 121 54.5
PSO339G1927 Papaver somniferum HOM05D001860 ORTHO05D004239 1.2e-22 110.5 121 53.7
Ah.03g134870 Amaranthus hybridus HOM05D001860 ORTHO05D004239 1.4e-21 107.1 74 68.9
TAR623G1369 Trochodendron aralioides HOM05D001860 ORTHO05D004239 4.0e-21 105.5 116 50.0
Atru.chr11.1761 Acer truncatum HOM05D001860 ORTHO05D004239 5.2e-21 105.1 78 66.7
Oeu055107.1 Olea europaea HOM05D001860 ORTHO05D004239 2.0e-20 103.2 151 44.4
TAR369G0797 Trochodendron aralioides HOM05D001860 ORTHO05D004239 7.6e-20 101.3 96 57.3
SEGI_36747 Sequoiadendron giganteum HOM05D001860 ORTHO05D004239 3.8e-19 99.0 127 48.8
HPP92_001714 Vanilla planifolia HOM05D005841 ORTHO05D007132 8.4e-19 97.8 126 46.8
Cpa.g.sc51.86 Carica papaya HOM05D001860 ORTHO05D004239 3.2e-18 95.9 121 46.3
Thhalv10008532m.g Eutrema salsugineum HOM05D001860 ORTHO05D004239 4.2e-18 95.5 128 46.1
CARHR014580 Cardamine hirsuta HOM05D001860 ORTHO05D004239 5.4e-18 95.1 128 46.1
Duzib128G1505 Durio zibethinus HOM05D001860 ORTHO05D004239 5.4e-18 95.1 92 55.4
AL1G26050 Arabidopsis lyrata HOM05D001860 ORTHO05D004239 9.3e-18 94.4 132 43.9
Sp1g12520 Schrenkiella parvula HOM05D001860 ORTHO05D004239 2.1e-17 93.2 128 44.5
BcaB08g34374 Brassica carinata HOM05D001860 ORTHO05D004239 2.7e-17 92.8 127 44.9
A09p62390 Brassica napus HOM05D001860 ORTHO05D004239 4.6e-17 92.0 131 42.7
MBI19_g24078_MAGBIO Magnolia biondii HOM05D001860 ORTHO05D004239 4.6e-17 92.0 110 48.2
C08p45960 Brassica napus HOM05D001860 ORTHO05D004239 6.0e-17 91.7 131 42.7
BolC8t52147H Brassica oleracea HOM05D001860 ORTHO05D004239 6.0e-17 91.7 131 42.7
Lj2A356T44 Lonicera japonica HOM05D001860 ORTHO05D004239 6.0e-17 91.7 136 44.9
BcaC07g41595 Brassica carinata HOM05D001860 ORTHO05D004239 1.3e-16 90.5 131 42.0
BraA09t41604Z Brassica rapa HOM05D001860 ORTHO05D004239 1.3e-16 90.5 131 42.0
DCAR_013696 Daucus carota HOM05D001860 ORTHO05D004239 3.0e-16 89.4 133 43.6
AT1G14180 Arabidopsis thaliana HOM05D001860 ORTHO05D004239 3.9e-16 89.0 132 42.4
BcaC07g41592 Brassica carinata HOM05D001860 ORTHO05D004239 3.9e-16 89.0 128 42.2
Carub.0001s1385 Capsella rubella HOM05D001860 ORTHO05D004239 6.6e-16 88.2 128 43.0
Nn2g15907 Nelumbo nucifera HOM05D001860 ORTHO05D004239 1.5e-15 87.0 106 50.0
Nn7g35793 Nelumbo nucifera HOM05D001860 ORTHO05D004239 1.5e-15 87.0 91 53.8
COL.COLO4_08624 Corchorus olitorius HOM05D001860 ORTHO05D004239 2.5e-15 86.3 92 52.2
AagrBONN_evm.TU.Sc2ySwM_344.4323 Anthoceros agrestis HOM05D001860 ORTHO05D004239 4.3e-15 85.5 121 44.6
Duzib106G1690 Durio zibethinus HOM05D001860 ORTHO05D004239 4.3e-15 85.5 101 47.5
Gohir.A11G239600 Gossypium hirsutum HOM05D001860 ORTHO05D004239 1.6e-14 83.6 92 51.1
Gorai.007G267000 Gossypium raimondii HOM05D001860 ORTHO05D004239 1.6e-14 83.6 92 51.1
Os03g0326300 Oryza sativa ssp. japonica HOM05D001860 ORTHO05D004239 8.1e-14 81.3 104 45.2
Gohir.D11G249300 Gossypium hirsutum HOM05D001860 ORTHO05D004239 1.8e-13 80.1 92 50.0
Thecc.05G258500 Theobroma cacao HOM05D001860 ORTHO05D004239 2.4e-13 79.7 101 47.5
CDE04G0155 Ceratophyllum demersum HOM05D001860 ORTHO05D004239 3.1e-13 79.3 102 46.1
TWI32G0146 Tripterygium wilfordii HOM05D001860 ORTHO05D004239 4.0e-13 79.0 111 42.3
A06p10170 Brassica napus HOM05D001860 ORTHO05D004239 9.0e-13 77.8 71 62.0
CDE07G1998 Ceratophyllum demersum HOM05D001860 ORTHO05D004239 9.0e-13 77.8 102 45.1
Zm00001eb395410 Zea mays HOM05D001860 ORTHO05D004239 1.5e-12 77.0 107 41.1
BraA06t24201Z Brassica rapa HOM05D001860 ORTHO05D004239 7.6e-12 74.7 71 60.6
BcaC05g25315 Brassica carinata HOM05D001860 ORTHO05D004239 6.4e-11 71.6 71 53.5
C05p11970 Brassica napus HOM05D001860 ORTHO05D004239 6.4e-11 71.6 71 53.5
BolC5t29953H Brassica oleracea HOM05D001860 ORTHO05D004239 6.4e-11 71.6 71 53.5
Sabra13G0053800 Salix brachista HOM05D001860 ORTHO05D004239 1.2e-09 67.4 89 42.7
Pp3c19_13250 Physcomitrium patens HOM05D001507 ORTHO05D004239 4.6e-09 65.5 129 37.2
Potri.019G032300 Populus trichocarpa HOM05D001860 ORTHO05D004239 1.0e-08 64.3 71 46.5
Sabra19G0040800 Salix brachista HOM05D001860 ORTHO05D004239 2.3e-08 63.2 71 46.5
Nn3g17282 Nelumbo nucifera HOM05D001860 ORTHO05D004239 3.0e-08 62.8 55 56.4
Potri.013G060900 Populus trichocarpa HOM05D001860 ORTHO05D004239 6.7e-08 61.6 89 40.4
Manes.08G148300 Manihot esculenta HOM05D001860 ORTHO05D004239 3.3e-07 59.3 89 40.4
Pp3c18_6410 Physcomitrium patens HOM05D001507 ORTHO05D004239 5.6e-07 58.5 113 38.1
unitig_747.g21181 Utricularia gibba HOM05D001860 ORTHO05D004239 1.6e-06 57.0 46 60.9


User provided reference genes

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