Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_11970 Corylus avellana HOM05D006399 ORTHO05D007988 4.6e-280 967.2 486 100.0
Cfa008944 Carpinus fangiana HOM05D006399 ORTHO05D007988 1.2e-259 899.4 490 92.4
CiPaw.05G130700 Carya illinoinensis HOM05D006399 ORTHO05D007988 5.0e-218 761.1 489 78.7
Dinv34129 Davidia involucrata HOM05D006399 ORTHO05D007988 3.2e-188 662.1 498 66.5
CSS0033869 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 2.3e-186 656.0 474 67.7
Prupe.1G278300 Prunus persica HOM05D006399 ORTHO05D007988 3.9e-186 655.2 500 67.6
TAR622G1196 Trochodendron aralioides HOM05D006399 ORTHO05D007988 6.9e-183 644.4 494 67.2
Cpa.g.sc1.57 Carica papaya HOM05D006399 ORTHO05D007988 2.9e-181 639.0 488 67.0
Oeu005762.1 Olea europaea HOM05D006399 ORTHO05D007988 7.1e-180 634.4 492 64.2
Thecc.02G341500 Theobroma cacao HOM05D006399 ORTHO05D007988 1.2e-179 633.6 480 65.2
Potri.008G089800 Populus trichocarpa HOM05D006399 ORTHO05D007988 1.6e-179 633.3 492 66.5
Duzib248G1019 Durio zibethinus HOM05D006399 ORTHO05D007988 3.9e-178 628.6 493 65.3
Gorai.013G088500 Gossypium raimondii HOM05D006399 ORTHO05D007988 1.5e-177 626.7 489 63.4
Sabra08G0067200 Salix brachista HOM05D006399 ORTHO05D007988 3.3e-177 625.5 491 67.2
Manes.05G105200 Manihot esculenta HOM05D006399 ORTHO05D007988 9.6e-177 624.0 475 65.9
Atru.chr11.1740 Acer truncatum HOM05D006399 ORTHO05D007988 1.3e-176 623.6 493 65.5
Gohir.D13G077400 Gossypium hirsutum HOM05D006399 ORTHO05D007988 9.0e-175 617.5 481 62.4
RcHm_v2.0_Chr4g0439341 Rosa chinensis HOM05D006399 ORTHO05D007988 2.9e-173 612.5 486 65.6
Actinidia17748 Actinidia chinensis HOM05D006399 ORTHO05D007988 4.9e-173 611.7 498 62.0
FAN07G1460 Fragaria x ananassa HOM05D006399 ORTHO05D007988 4.2e-172 608.6 483 65.6
DCAR_007171 Daucus carota HOM05D006399 ORTHO05D007988 5.5e-172 608.2 481 65.3
CANSAT64G0537 Cannabis sativa HOM05D006399 ORTHO05D007988 1.2e-171 607.1 490 65.1
Rhsim12G0079500 Rhododendron simsii HOM05D006399 ORTHO05D007988 7.9e-171 604.4 495 63.0
MD16G1068900 Malus domestica HOM05D006399 ORTHO05D007988 1.8e-170 603.2 490 63.3
FAN12G0639 Fragaria x ananassa HOM05D006399 ORTHO05D007988 8.7e-170 600.9 486 65.0
FvH4_4g30980 Fragaria vesca HOM05D006399 ORTHO05D007988 5.6e-169 598.2 482 64.3
Lalb_Chr04g0255911 Lupinus albus HOM05D006399 ORTHO05D007988 2.8e-168 595.9 505 63.0
Glyma.02G110300 Glycine max HOM05D006399 ORTHO05D007988 3.4e-166 589.0 499 61.5
Nn3g17286 Nelumbo nucifera HOM05D006399 ORTHO05D007988 2.9e-165 585.9 499 60.5
Nn3g17302 Nelumbo nucifera HOM05D006399 ORTHO05D007988 2.9e-165 585.9 499 60.5
Phvul.003G046500 Phaseolus vulgaris HOM05D006399 ORTHO05D007988 1.9e-164 583.2 494 60.7
Cc00_g16610 Coffea canephora HOM05D006399 ORTHO05D007988 3.2e-164 582.4 496 60.9
Cfa008945 Carpinus fangiana HOM05D006399 ORTHO05D007988 1.2e-163 580.5 479 61.4
Lj2g0004295 Lotus japonicus HOM05D006399 ORTHO05D007988 1.0e-162 577.4 507 60.0
Actinidia31971 Actinidia chinensis HOM05D006399 ORTHO05D007988 3.0e-162 575.9 486 60.5
Eucgr.B03205 Eucalyptus grandis HOM05D006399 ORTHO05D007988 3.0e-162 575.9 471 60.9
Haze_11971 Corylus avellana HOM05D006399 ORTHO05D007988 3.9e-162 575.5 502 59.6
VMungo1215G0113 Vigna mungo HOM05D006399 ORTHO05D007988 1.1e-161 573.9 497 60.6
Glyma.01G052300 Glycine max HOM05D006399 ORTHO05D007988 4.8e-160 568.5 506 58.7
Nitab4.5_0000145g0020 Nicotiana tabacum HOM05D006399 ORTHO05D007988 2.6e-158 562.8 469 62.5
Aqoxy3G00634 Aquilegia oxysepala HOM05D006399 ORTHO05D007988 1.4e-156 557.0 483 59.2
Ca_04827_v3 Cicer arietinum L. HOM05D006399 ORTHO05D007988 3.6e-155 552.4 481 60.7
QL03p069077 Quercus lobata HOM05D006399 ORTHO05D007988 3.6e-155 552.4 504 58.5
TPR.G34705 Trifolium pratense HOM05D006399 ORTHO05D007988 4.6e-155 552.0 498 59.6
QL93p1999_0143 Quercus lobata HOM05D006399 ORTHO05D007988 1.3e-154 550.4 504 58.1
Medtr5g042100 Medicago truncatula HOM05D006399 ORTHO05D007988 9.7e-153 544.3 494 59.5
THA.LOC104808694 Tarenaya hassleriana HOM05D006399 ORTHO05D007988 2.2e-152 543.1 500 60.6
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 2.8e-152 542.7 364 71.7
PSO210G1214 Papaver somniferum HOM05D006399 ORTHO05D007988 8.2e-152 541.2 498 57.8
Nitab4.5_0004661g0030 Nicotiana tabacum HOM05D006399 ORTHO05D007988 1.1e-151 540.8 399 68.2
CiPaw.06G087600 Carya illinoinensis HOM05D006399 ORTHO05D007988 5.3e-151 538.5 498 57.6
Psat2g116280 Pisum sativum HOM05D006399 ORTHO05D007988 5.3e-151 538.5 498 58.6
GSVIVG01005154001 Vitis vinifera HOM05D006399 ORTHO05D007988 5.9e-150 535.0 502 56.4
QL12p039367 Quercus lobata HOM05D006399 ORTHO05D007988 2.2e-149 533.1 473 59.2
Eucgr.G02484 Eucalyptus grandis HOM05D006399 ORTHO05D007988 9.4e-148 527.7 509 56.0
PGR102G0590 Punica granatum HOM05D006399 ORTHO05D007988 2.7e-147 526.2 500 56.4
Lsat_1_v5_gn_3_51980 Lactuca sativa HOM05D006399 ORTHO05D007988 1.0e-146 524.2 468 58.5
HanXRQChr15g0476901 Helianthus annuus HOM05D006399 ORTHO05D007988 3.0e-146 522.7 493 56.6
CSS0044828 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 4.4e-145 518.8 467 57.2
unitig_699.g19915 Utricularia gibba HOM05D006399 ORTHO05D007988 5.7e-145 518.5 463 57.7
CAN.G1335.8 Capsicum annuum HOM05D006399 ORTHO05D007988 8.2e-144 514.6 489 55.8
GSVIVG01005153001 Vitis vinifera HOM05D006399 ORTHO05D007988 1.1e-143 514.2 494 57.1
Migut.L01261 Erythranthe guttata HOM05D006399 ORTHO05D007988 1.8e-143 513.5 461 57.7
RcHm_v2.0_Chr4g0439361 Rosa chinensis HOM05D006399 ORTHO05D007988 4.5e-142 508.8 491 57.6
Dinv07949 Davidia involucrata HOM05D006399 ORTHO05D007988 5.9e-142 508.4 499 56.1
QL12p039232 Quercus lobata HOM05D006399 ORTHO05D007988 5.9e-142 508.4 484 56.6
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 1.0e-141 507.7 370 64.9
Dinv34130 Davidia involucrata HOM05D006399 ORTHO05D007988 3.8e-141 505.8 499 55.7
Thhalv10007591m.g Eutrema salsugineum HOM05D006399 ORTHO05D007988 3.8e-141 505.8 438 59.1
Atru.chr11.1742 Acer truncatum HOM05D006399 ORTHO05D007988 5.0e-141 505.4 512 56.2
EL10Ac6g13248 Beta vulgaris HOM05D006399 ORTHO05D007988 6.5e-141 505.0 459 59.9
AL1G38940 Arabidopsis lyrata HOM05D006399 ORTHO05D007988 2.5e-140 503.1 438 59.1
Sp1g22040 Schrenkiella parvula HOM05D006399 ORTHO05D007988 5.5e-140 501.9 458 57.2
AT1G26761 Arabidopsis thaliana HOM05D006399 ORTHO05D007988 3.6e-139 499.2 383 64.0
FAN22G0994 Fragaria x ananassa HOM05D006399 ORTHO05D007988 3.6e-139 499.2 484 55.4
PGR102G2002 Punica granatum HOM05D006399 ORTHO05D007988 6.1e-139 498.4 447 58.8
FAN07G2088 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.4e-138 497.3 484 55.8
FvH4_4g30990 Fragaria vesca HOM05D006399 ORTHO05D007988 5.2e-138 495.4 488 56.6
Peaxi162Scf00222g00816 Petunia axillaris HOM05D006399 ORTHO05D007988 5.2e-138 495.4 477 54.1
BraA09t39516Z Brassica rapa HOM05D006399 ORTHO05D007988 6.7e-138 495.0 465 57.0
PGSC0003DMG400018440 Solanum tuberosum HOM05D006399 ORTHO05D007988 3.3e-137 492.7 485 54.2
FAN12G2051 Fragaria x ananassa HOM05D006399 ORTHO05D007988 5.7e-137 491.9 488 56.4
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 9.7e-137 491.1 488 54.9
A09p40180 Brassica napus HOM05D006399 ORTHO05D007988 2.2e-136 490.0 454 57.0
BcaC05g26389 Brassica carinata HOM05D006399 ORTHO05D007988 8.2e-136 488.0 452 57.1
C05p24200 Brassica napus HOM05D006399 ORTHO05D007988 8.2e-136 488.0 452 57.1
BolC5t31156H Brassica oleracea HOM05D006399 ORTHO05D007988 8.2e-136 488.0 452 57.1
Sopen05g003560 Solanum pennellii HOM05D006399 ORTHO05D007988 1.1e-135 487.6 490 55.3
Ah.02g129470 Amaranthus hybridus HOM05D006399 ORTHO05D007988 1.4e-135 487.3 439 57.4
Carub.0001s2425 Capsella rubella HOM05D006399 ORTHO05D007988 1.4e-135 487.3 438 57.8
Solyc05g007680.1 Solanum lycopersicum HOM05D006399 ORTHO05D007988 3.1e-135 486.1 490 55.5
Aa31LG7G8360 Aethionema arabicum HOM05D006399 ORTHO05D007988 1.0e-133 481.1 437 57.0
Manes.01G033900 Manihot esculenta HOM05D006399 ORTHO05D007988 2.2e-133 479.9 475 54.9
CDE06G2322 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 3.5e-126 456.1 470 52.8
ATR0564G327 Amborella trichopoda HOM05D006399 ORTHO05D007988 1.0e-125 454.5 456 54.4
CARHR025180 Cardamine hirsuta HOM05D006399 ORTHO05D007988 9.4e-124 448.0 446 54.9
SEGI_38638 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 5.2e-122 442.2 434 50.9
CiPaw.05G130800 Carya illinoinensis HOM05D006399 ORTHO05D007988 9.8e-121 438.0 497 48.9
FAN22G2397 Fragaria x ananassa HOM05D006399 ORTHO05D007988 4.5e-110 402.5 475 49.9
Pp3c5_14870 Physcomitrium patens HOM05D006399 ORTHO05D007988 1.5e-105 387.5 424 45.0
MSTRG.719 Avicennia marina HOM05D006399 ORTHO05D007988 1.2e-102 377.9 330 59.7
Ciclev10032022m.g Citrus clementina HOM05D006399 ORTHO05D007988 1.3e-85 321.2 490 41.6
AUR62032821 Chenopodium quinoa HOM05D006399 ORTHO05D007988 1.2e-81 308.1 286 56.3
SalBow2G2517 Salvia bowleyana HOM05D006399 ORTHO05D007988 7.6e-81 305.4 210 65.7
Os08g0433300 Oryza sativa ssp. japonica HOM05D006399 ORTHO05D007988 2.7e-78 297.0 359 45.7
MBI05_g36409_MAGBIO Magnolia biondii HOM05D006399 ORTHO05D007988 3.3e-76 290.0 331 51.1
Zm00001eb041520 Zea mays HOM05D006399 ORTHO05D007988 4.7e-75 286.2 355 44.8
Cre06.g273050 Chlamydomonas reinhardtii HOM05D006399 ORTHO05D007988 1.3e-69 268.1 393 40.7
Lj7C251T2 Lonicera japonica HOM05D006399 ORTHO05D007988 1.6e-59 234.6 311 44.1
PRCOL_00004009 Prasinoderma coloniale HOM05D006399 ORTHO05D007988 1.3e-56 224.9 392 37.5
COL.COLO4_27992 Corchorus olitorius HOM05D006399 ORTHO05D007988 1.4e-55 221.5 224 56.2
TWI75G1459 Tripterygium wilfordii HOM05D006399 ORTHO05D007988 7.7e-33 146.0 180 47.8
Lj7P254T18 Lonicera japonica HOM05D006399 ORTHO05D007988 1.9e-31 141.4 113 62.8
Pp3c9_20180 Physcomitrium patens HOM05D006399 ORTHO05D007988 9.4e-31 139.0 421 30.6
AagrBONN_evm.TU.Sc2ySwM_362.1792 Anthoceros agrestis HOM05D006399 ORTHO05D007988 6.1e-30 136.3 392 31.4
CDE02G1760 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 2.3e-29 134.4 129 53.5
Pp3c11_9510 Physcomitrium patens HOM05D006399 ORTHO05D007988 5.3e-26 123.2 415 28.9
SEGI_31378 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 1.2e-25 122.1 387 29.5
SEGI_07124 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 7.2e-23 112.8 331 32.6
Hma1.2p1_0235F.1_g098770 Hydrangea macrophylla HOM05D006399 ORTHO05D007988 2.0e-20 104.8 57 78.9
SGA_v2.0_scaffold109G31082 Striga asiatica HOM05D006399 ORTHO05D007988 1.1e-07 62.4 40 65.0


User provided reference genes

Program Settings