Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_11954 Corylus avellana HOM05D006937 ORTHO05D008747 1.7e-82 309.3 161 100.0
CiPaw.06G089000 Carya illinoinensis HOM05D006937 ORTHO05D008747 2.2e-61 239.2 161 76.4
QL03p069840 Quercus lobata HOM05D006937 ORTHO05D008747 3.8e-61 238.4 160 76.9
Gorai.009G325600 Gossypium raimondii HOM05D006937 ORTHO05D008747 1.1e-60 236.9 161 76.4
Gohir.D05G305600 Gossypium hirsutum HOM05D006937 ORTHO05D008747 1.9e-60 236.1 161 76.4
Sed0007221 Sechium edule HOM05D006937 ORTHO05D008747 1.9e-60 236.1 161 75.8
MELO3C024261.2 Cucumis melo HOM05D006937 ORTHO05D008747 2.4e-60 235.7 160 76.2
Gohir.A05G305601 Gossypium hirsutum HOM05D006937 ORTHO05D008747 4.2e-60 235.0 161 76.4
CsaV3_7G033500 Cucumis sativus L. HOM05D006937 ORTHO05D008747 1.0e-58 230.3 160 74.4
Ciclev10032989m.g Citrus clementina HOM05D006937 ORTHO05D008747 1.3e-58 229.9 161 75.8
Thecc.02G339100 Theobroma cacao HOM05D006937 ORTHO05D008747 1.3e-58 229.9 161 74.5
Sed0004013 Sechium edule HOM05D006937 ORTHO05D008747 3.0e-58 228.8 161 73.3
Atru.chr11.1713 Acer truncatum HOM05D006937 ORTHO05D008747 5.1e-58 228.0 161 75.8
Manes.01G032100 Manihot esculenta HOM05D006937 ORTHO05D008747 5.1e-58 228.0 161 72.7
CSS0011527 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 1.1e-57 226.9 154 77.9
Eucgr.G02475 Eucalyptus grandis HOM05D006937 ORTHO05D008747 1.1e-57 226.9 161 73.9
COL.COLO4_27967 Corchorus olitorius HOM05D006937 ORTHO05D008747 1.5e-57 226.5 161 72.7
Glyma.01G053200 Glycine max HOM05D006937 ORTHO05D008747 1.5e-57 226.5 161 73.3
Phvul.001G169600 Phaseolus vulgaris HOM05D006937 ORTHO05D008747 7.3e-57 224.2 161 73.3
Glyma.02G111700 Glycine max HOM05D006937 ORTHO05D008747 1.3e-56 223.4 161 72.7
Potri.008G091400 Populus trichocarpa HOM05D006937 ORTHO05D008747 1.6e-56 223.0 161 72.0
Sopen05g007730 Solanum pennellii HOM05D006937 ORTHO05D008747 2.8e-56 222.2 154 73.4
VMungo1215G2773 Vigna mungo HOM05D006937 ORTHO05D008747 2.8e-56 222.2 160 72.5
Duzib268G1027 Durio zibethinus HOM05D006937 ORTHO05D008747 6.2e-56 221.1 161 70.8
Dinv34099 Davidia involucrata HOM05D003669 ORTHO05D005046 1.4e-55 219.9 152 76.3
GSVIVG01025409001 Vitis vinifera HOM05D006937 ORTHO05D008747 1.8e-55 219.5 153 75.2
Prupe.1G280000 Prunus persica HOM05D006937 ORTHO05D008747 4.0e-55 218.4 161 70.8
PGSC0003DMG401028340 Solanum tuberosum HOM05D006937 ORTHO05D008747 4.0e-55 218.4 154 72.7
TAR629G2875 Trochodendron aralioides HOM05D006937 ORTHO05D008747 4.0e-55 218.4 154 72.7
TWI60G0457 Tripterygium wilfordii HOM05D006937 ORTHO05D008747 5.3e-55 218.0 157 73.9
CAN.G1642.3 Capsicum annuum HOM05D006937 ORTHO05D008747 1.5e-54 216.5 152 74.3
CAN.G964.22 Capsicum annuum HOM05D006937 ORTHO05D008747 2.0e-54 216.1 152 74.3
DCAR_018308 Daucus carota HOM05D006937 ORTHO05D008747 2.0e-54 216.1 152 73.7
MD16G1066900 Malus domestica HOM05D006937 ORTHO05D008747 3.4e-54 215.3 153 71.9
MD13G1068100 Malus domestica HOM05D006937 ORTHO05D008747 4.5e-54 214.9 152 73.0
Nn3g17337 Nelumbo nucifera HOM05D006937 ORTHO05D008747 7.6e-54 214.2 154 73.4
MSTRG.2329 Avicennia marina HOM05D006937 ORTHO05D008747 1.3e-53 213.4 150 74.7
Lj1g0016193 Lotus japonicus HOM05D006937 ORTHO05D008747 1.3e-53 213.4 161 68.9
FvH4_4g30700 Fragaria vesca HOM05D006937 ORTHO05D008747 2.9e-53 212.2 155 70.3
SGA_v2.0_scaffold287G47146 Striga asiatica HOM05D006937 ORTHO05D008747 4.9e-53 211.5 150 73.3
CANSAT64G0520 Cannabis sativa HOM05D006937 ORTHO05D008747 8.4e-53 210.7 153 69.3
FAN17G2174 Fragaria x ananassa HOM05D006937 ORTHO05D008747 1.1e-52 210.3 153 70.6
RcHm_v2.0_Chr4g0439101 Rosa chinensis HOM05D006937 ORTHO05D008747 1.1e-52 210.3 155 69.7
Eucgr.D01709 Eucalyptus grandis HOM05D006937 ORTHO05D008747 1.9e-52 209.5 161 70.2
Lalb_Chr10g0098481 Lupinus albus HOM05D006937 ORTHO05D008747 1.9e-52 209.5 161 68.3
Medtr5g042620 Medicago truncatula HOM05D006937 ORTHO05D008747 1.9e-52 209.5 153 68.6
Lj6g0000786 Lotus japonicus HOM05D006937 ORTHO05D008747 3.2e-52 208.8 161 67.1
Cc11_g12540 Coffea canephora HOM05D006937 ORTHO05D008747 4.2e-52 208.4 149 75.2
FAN07G0310 Fragaria x ananassa HOM05D006937 ORTHO05D008747 4.2e-52 208.4 155 69.0
Migut.E00068 Erythranthe guttata HOM05D006937 ORTHO05D008747 5.4e-52 208.0 145 73.1
Hund25447 Selenicereus undatus HOM05D006937 ORTHO05D008747 7.1e-52 207.6 152 69.1
Nitab4.5_0000391g0170 Nicotiana tabacum HOM05D006937 ORTHO05D008747 9.3e-52 207.2 152 72.4
ATR0730G163 Amborella trichopoda HOM05D006937 ORTHO05D008747 1.2e-51 206.8 150 72.0
EL10Ac6g13467 Beta vulgaris HOM05D006937 ORTHO05D008747 2.7e-51 205.7 152 69.1
unitig_744.g24284 Utricularia gibba HOM05D006937 ORTHO05D008747 3.5e-51 205.3 154 69.5
AUR62024142 Chenopodium quinoa HOM05D006937 ORTHO05D008747 4.6e-51 204.9 152 68.4
SGA_v2.0_scaffold114G32026 Striga asiatica HOM05D006937 ORTHO05D008747 4.6e-51 204.9 160 69.4
arahy.Tifrunner.gnm1.ann1.TRF8LB Arachis hypogaea HOM05D006937 ORTHO05D008747 1.0e-50 203.8 155 69.7
Zm00001eb326530 Zea mays HOM05D006937 ORTHO05D008747 1.3e-50 203.4 151 68.2
Os07g0595800 Oryza sativa ssp. japonica HOM05D006937 ORTHO05D008747 5.1e-50 201.4 148 68.9
arahy.Tifrunner.gnm1.ann1.A48TS2 Arachis hypogaea HOM05D006937 ORTHO05D008747 1.1e-49 200.3 162 67.9
PSO675G6138 Papaver somniferum HOM05D006937 ORTHO05D008747 1.9e-49 199.5 151 70.2
ECA246G2190 Erigeron canadensis HOM05D006937 ORTHO05D008747 7.4e-49 197.6 150 68.0
AUR62005588 Chenopodium quinoa HOM05D006937 ORTHO05D008747 9.6e-49 197.2 149 67.1
Lsat_1_v5_gn_3_20221 Lactuca sativa HOM05D006937 ORTHO05D008747 9.6e-49 197.2 151 68.2
HanXRQChr17g0537301 Helianthus annuus HOM05D006937 ORTHO05D008747 1.6e-48 196.4 148 68.2
arahy.Tifrunner.gnm1.ann1.8BL9U8 Arachis hypogaea HOM05D006937 ORTHO05D008747 2.1e-48 196.1 155 68.4
Aqoxy3G03499 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 3.7e-48 195.3 150 68.7
Aqoxy5G02063 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 3.7e-48 195.3 150 68.7
Lj3A1033G46 Lonicera japonica HOM05D006937 ORTHO05D008747 4.8e-48 194.9 143 74.1
PSO541G5056 Papaver somniferum HOM05D006937 ORTHO05D008747 1.1e-47 193.7 151 67.5
Nitab4.5_0008978g0010 Nicotiana tabacum HOM05D006937 ORTHO05D008747 1.8e-47 193.0 190 60.0
Oeu016239.1 Olea europaea HOM05D006937 ORTHO05D008747 4.0e-47 191.8 138 74.6
TPR.G19944 Trifolium pratense HOM05D006937 ORTHO05D008747 4.0e-47 191.8 161 59.6
Aqoxy5G02982 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 2.6e-46 189.1 149 65.1
PGR119G1353 Punica granatum HOM05D006937 ORTHO05D008747 6.4e-45 184.5 161 60.2
SEGI_41088 Sequoiadendron giganteum HOM05D006937 ORTHO05D008747 2.1e-43 179.5 146 63.0
Psat2g127680 Pisum sativum HOM05D006937 ORTHO05D008747 3.5e-43 178.7 139 65.5
PGR142G2813 Punica granatum HOM05D006937 ORTHO05D008747 1.8e-42 176.4 161 58.4
Actinidia31958 Actinidia chinensis HOM05D003669 ORTHO05D005046 1.1e-41 173.7 157 62.4
FAN12G3635 Fragaria x ananassa HOM05D006937 ORTHO05D008747 1.5e-41 173.3 109 78.9
CDE11G0882 Ceratophyllum demersum HOM05D006937 ORTHO05D008747 3.3e-41 172.2 156 60.3
Rhsim12G0077900 Rhododendron simsii HOM05D006937 ORTHO05D008747 9.6e-41 170.6 120 74.2
HPP92_013408 Vanilla planifolia HOM05D006937 ORTHO05D008747 1.1e-39 167.2 135 63.7
Sc11g0000570 Simmondsia chinensis HOM05D006937 ORTHO05D008747 5.3e-39 164.9 120 70.8
SHI35111 Sapria himalayana HOM05D006937 ORTHO05D008747 1.5e-38 163.3 159 56.6
Peaxi162Scf00222g00024 Petunia axillaris HOM05D006937 ORTHO05D008747 2.2e-37 159.5 125 66.4
THA.LOC104808654 Tarenaya hassleriana HOM05D006937 ORTHO05D008747 3.2e-36 155.6 161 52.8
AagrBONN_evm.TU.Sc2ySwM_228.447 Anthoceros agrestis HOM05D006937 ORTHO05D008747 4.2e-36 155.2 146 56.8
Mapoly0006s0094 Marchantia polymorpha HOM05D006937 ORTHO05D008747 7.1e-36 154.5 147 55.8
CBR_g48697 Chara braunii HOM05D006937 ORTHO05D008747 4.6e-35 151.8 155 51.0
Ca_04880_v3 Cicer arietinum L. HOM05D006937 ORTHO05D008747 4.6e-35 151.8 118 65.3
AL1G39070 Arabidopsis lyrata HOM05D006937 ORTHO05D008747 2.3e-34 149.4 152 53.3
arahy.Tifrunner.gnm1.ann1.J4SELD Arachis hypogaea HOM05D006937 ORTHO05D008747 3.0e-34 149.1 106 71.7
A07p13030 Brassica napus HOM05D001252 ORTHO05D005295 6.7e-34 147.9 161 50.9
Sabra08G0068400 Salix brachista HOM05D006937 ORTHO05D008747 8.7e-34 147.5 125 62.4
BcaC06g35132 Brassica carinata HOM05D006937 ORTHO05D008747 1.5e-33 146.7 152 52.0
BraA07t29074Z Brassica rapa HOM05D001252 ORTHO05D005295 1.5e-33 146.7 161 50.3
BcaB03g14081 Brassica carinata HOM05D006937 ORTHO05D008747 1.9e-33 146.4 154 50.6
BcaB05g21932 Brassica carinata HOM05D006937 ORTHO05D008747 2.5e-33 146.0 154 50.0
Aa31LG7G8430 Aethionema arabicum HOM05D006937 ORTHO05D008747 4.3e-33 145.2 154 50.0
Carub.0001s2437 Capsella rubella HOM05D006937 ORTHO05D008747 9.7e-33 144.1 152 52.0
Sp6g00050 Schrenkiella parvula HOM05D006937 ORTHO05D008747 9.7e-33 144.1 152 50.7
C07p19480 Brassica napus HOM05D001252 ORTHO05D005295 1.6e-32 143.3 161 49.7
BolC7t42467H Brassica oleracea HOM05D001252 ORTHO05D001661 1.6e-32 143.3 161 49.7
Pp3c21_19110 Physcomitrium patens HOM05D006937 ORTHO05D008747 2.2e-32 142.9 142 52.1
AT1G26660 Arabidopsis thaliana HOM05D006937 ORTHO05D008747 2.8e-32 142.5 152 50.7
Thhalv10008997m.g Eutrema salsugineum HOM05D006937 ORTHO05D008747 2.8e-32 142.5 152 50.7
CSS0016362 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 6.9e-31 137.9 158 55.1
ClCG09G001850 Citrullus lanatus HOM05D006937 ORTHO05D008747 3.8e-29 132.1 77 83.1
Ah.02g130690 Amaranthus hybridus HOM05D006937 ORTHO05D008747 4.2e-28 128.6 152 47.4
SalBow8G3842 Salvia bowleyana HOM05D006937 ORTHO05D008747 3.0e-26 122.5 141 49.6
PSO357G0488 Papaver somniferum HOM05D006937 ORTHO05D008747 1.5e-22 110.2 69 76.8
arahy.Tifrunner.gnm1.ann1.K4YSPN Arachis hypogaea HOM05D006937 ORTHO05D008747 1.0e-21 107.5 65 76.9
BcaC05g26400 Brassica carinata HOM05D004525 ORTHO05D005295 6.9e-15 84.7 101 48.5
Sabra10G0124400 Salix brachista HOM05D006937 ORTHO05D008747 1.6e-11 73.6 162 32.7
A09p40080 Brassica napus HOM05D004525 ORTHO05D005295 2.7e-11 72.8 84 50.0
Cpa.g.sc1.69 Carica papaya HOM05D006937 ORTHO05D008747 1.5e-09 67.0 45 75.6
Potri.010G163600 Populus trichocarpa HOM05D006937 ORTHO05D008747 6.3e-08 61.6 164 34.1
Cc00_g19610 Coffea canephora HOM05D000421 ORTHO05D013979 3.1e-07 59.3 43 67.4
Cc08_g04320 Coffea canephora HOM05D006937 ORTHO05D013979 3.1e-07 59.3 43 67.4
PRCOL_00006274 Prasinoderma coloniale HOM05D006937 ORTHO05D008747 3.1e-07 59.3 146 33.6


User provided reference genes

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