Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 5.6e-107 391.0 199 100.0
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 1.1e-97 360.1 189 96.8
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 2.2e-71 272.7 191 77.0
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 4.5e-64 248.4 193 71.0
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 5.3e-57 224.9 182 71.4
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.2e-56 223.8 197 64.5
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 2.0e-56 223.0 191 66.5
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 2.6e-56 222.6 197 64.5
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 4.5e-56 221.9 191 66.0
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 7.7e-56 221.1 191 66.5
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 7.7e-56 221.1 191 67.0
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 6.5e-55 218.0 191 64.9
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 1.6e-53 213.4 192 65.1
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 1.4e-49 200.3 194 64.9
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 9.1e-49 197.6 190 62.1
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 1.3e-47 193.7 198 60.1
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 2.9e-47 192.6 162 67.3
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 5.0e-47 191.8 200 59.0
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 4.2e-46 188.7 185 59.5
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 5.5e-46 188.3 193 59.6
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 7.2e-46 188.0 194 57.7
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 7.2e-46 188.0 190 60.5
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 1.6e-45 186.8 195 59.5
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 3.6e-45 185.7 192 58.9
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 4.7e-45 185.3 193 58.5
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 1.0e-44 184.1 195 55.9
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 1.8e-44 183.3 197 59.9
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 2.3e-44 183.0 197 55.3
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 2.3e-44 183.0 195 55.4
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 2.3e-44 183.0 194 58.8
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 4.0e-44 182.2 179 60.3
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 5.2e-44 181.8 142 68.3
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 6.7e-44 181.4 196 58.2
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 1.5e-43 180.3 194 58.8
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 2.6e-43 179.5 193 58.5
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 3.3e-43 179.1 184 58.7
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 3.3e-43 179.1 184 58.7
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 5.7e-43 178.3 104 86.5
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 5.7e-43 178.3 138 68.8
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 5.7e-43 178.3 189 57.1
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 7.5e-43 177.9 162 67.3
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 9.7e-43 177.6 121 76.0
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 4.8e-42 175.3 196 54.1
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 4.8e-42 175.3 190 55.8
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 1.4e-41 173.7 181 56.4
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 3.1e-41 172.6 188 56.9
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 3.1e-41 172.6 104 82.7
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 2.0e-40 169.9 188 55.9
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 2.7e-40 169.5 163 60.7
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 1.3e-39 167.2 161 61.5
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 1.7e-39 166.8 180 55.0
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 2.9e-39 166.0 185 55.1
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 2.9e-39 166.0 150 61.3
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 5.0e-39 165.2 181 55.8
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 5.0e-39 165.2 190 53.2
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 6.5e-39 164.9 188 55.9
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 6.5e-39 164.9 194 54.1
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 5.5e-38 161.8 124 69.4
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 7.2e-38 161.4 116 72.4
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 9.4e-38 161.0 128 66.4
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 2.1e-37 159.8 185 52.4
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 2.7e-37 159.5 131 63.4
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 2.7e-37 159.5 140 62.1
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 4.7e-37 158.7 103 77.7
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 6.1e-37 158.3 105 75.2
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 1.4e-36 157.1 185 54.6
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 2.3e-36 156.4 167 55.7
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 2.3e-36 156.4 137 61.3
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 5.2e-36 155.2 112 75.0
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 5.2e-36 155.2 95 78.9
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 6.8e-36 154.8 146 63.7
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 6.8e-36 154.8 105 74.3
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 6.8e-36 154.8 112 75.0
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 8.8e-36 154.5 185 51.4
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 1.5e-35 153.7 132 62.1
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 2.0e-35 153.3 125 64.0
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 2.6e-35 152.9 154 54.5
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 3.4e-35 152.5 129 64.3
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 3.4e-35 152.5 122 65.6
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 4.4e-35 152.1 147 61.9
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 4.4e-35 152.1 129 64.3
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 7.5e-35 151.4 101 75.2
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 9.8e-35 151.0 96 77.1
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 9.8e-35 151.0 226 49.1
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 1.7e-34 150.2 155 56.1
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 1.7e-34 150.2 158 55.7
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 2.8e-34 149.4 181 49.7
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 2.8e-34 149.4 137 59.9
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 4.8e-34 148.7 95 76.8
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 4.8e-34 148.7 101 72.3
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 6.3e-34 148.3 192 48.4
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 5.4e-33 145.2 157 57.3
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 2.2e-31 139.8 109 69.7
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 6.5e-31 138.3 134 55.2
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 7.2e-30 134.8 81 84.0
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 2.1e-29 133.3 156 54.5
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 3.6e-29 132.5 100 65.0
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 4.7e-29 132.1 103 66.0
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 8.0e-29 131.3 134 58.2
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 2.3e-28 129.8 100 66.0
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 1.2e-27 127.5 99 65.7
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 2.6e-27 126.3 94 64.9
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 7.5e-27 124.8 95 67.4
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 2.2e-26 123.2 86 72.1
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 9.2e-25 117.9 160 46.2
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 3.5e-24 115.9 63 88.9
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 2.5e-22 109.8 64 82.8
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 2.1e-21 106.7 64 81.2
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 8.9e-20 101.3 129 41.9
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 1.5e-19 100.5 129 41.1
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 1.3e-18 97.4 80 63.8
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 1.3e-15 87.4 171 40.4
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 1.2e-13 80.9 90 52.2
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 2.8e-13 79.7 85 44.7
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 4.7e-13 79.0 90 46.7
Eucgr.G02394 Eucalyptus grandis HOM05D006650 ORTHO05D008401 1.1e-09 67.8 102 47.1
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 6.6e-07 58.5 80 38.8
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 1.1e-06 57.8 103 44.7


User provided reference genes

Program Settings