Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_11723 Corylus avellana HOM05D006938 ORTHO05D008600 3.4e-101 371.7 192 100.0
Cfa008713 Carpinus fangiana HOM05D006938 ORTHO05D008600 6.9e-86 320.9 174 96.6
QL03p043666 Quercus lobata HOM05D006938 ORTHO05D008600 1.2e-66 256.9 180 75.0
CiPaw.09G164200 Carya illinoinensis HOM05D006938 ORTHO05D008600 5.9e-61 238.0 157 80.3
RcHm_v2.0_Chr4g0446461 Rosa chinensis HOM05D006938 ORTHO05D008600 3.6e-58 228.8 185 68.6
TAR629G2816 Trochodendron aralioides HOM05D006938 ORTHO05D008600 4.6e-58 228.4 182 67.0
FAN17G2681 Fragaria x ananassa HOM05D006938 ORTHO05D008600 8.2e-55 217.6 184 66.3
FvH4_4g36740 Fragaria vesca HOM05D006938 ORTHO05D008600 1.4e-54 216.9 186 65.1
FAN12G4276 Fragaria x ananassa HOM05D006938 ORTHO05D008600 1.4e-54 216.9 186 65.6
Dinv17599 Davidia involucrata HOM05D006938 ORTHO05D008600 2.0e-53 213.0 180 66.1
Medtr1g097270 Medicago truncatula HOM05D006938 ORTHO05D008600 2.6e-53 212.6 183 60.7
Psat6g189200 Pisum sativum HOM05D006938 ORTHO05D008600 2.6e-53 212.6 183 61.7
Ca_10639_v3 Cicer arietinum L. HOM05D006938 ORTHO05D008600 6.5e-52 208.0 180 60.6
Hma1.2p1_0232F.1_g097690 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 8.5e-52 207.6 190 62.1
arahy.Tifrunner.gnm1.ann1.ZPRB1V Arachis hypogaea HOM05D006938 ORTHO05D008600 1.4e-51 206.8 184 63.6
Glyma.10G219400 Glycine max HOM05D006938 ORTHO05D008600 1.9e-51 206.5 176 65.3
Potri.005G199000 Populus trichocarpa HOM05D006938 ORTHO05D008600 3.2e-51 205.7 184 61.4
TPR.G23154 Trifolium pratense HOM05D006938 ORTHO05D008600 1.2e-50 203.8 183 57.9
Eucgr.G00991 Eucalyptus grandis HOM05D006938 ORTHO05D008600 7.9e-50 201.1 174 64.4
Phvul.007G086000 Phaseolus vulgaris HOM05D006938 ORTHO05D008600 1.0e-49 200.7 177 62.7
Potri.002G062100 Populus trichocarpa HOM05D006938 ORTHO05D008600 1.0e-49 200.7 189 60.8
Prupe.1G345500 Prunus persica HOM05D006938 ORTHO05D008600 1.0e-49 200.7 184 60.3
Sabra02G0050200 Salix brachista HOM05D006938 ORTHO05D008600 3.9e-49 198.7 189 59.3
Lj5g0002504 Lotus japonicus HOM05D006938 ORTHO05D008600 6.7e-49 198.0 177 60.5
PGR142G2203 Punica granatum HOM05D006938 ORTHO05D008600 8.8e-49 197.6 173 64.7
Glyma.20G172300 Glycine max HOM05D006938 ORTHO05D008600 1.1e-48 197.2 176 63.1
MD13G1007500 Malus domestica HOM05D006938 ORTHO05D008600 1.1e-48 197.2 181 59.7
vmacro22268 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 2.6e-48 196.1 185 61.1
Duzib084G0622 Durio zibethinus HOM05D006938 ORTHO05D008600 4.4e-48 195.3 187 57.8
CANSAT64G2234 Cannabis sativa HOM05D006938 ORTHO05D008600 3.7e-47 192.2 148 67.6
CSS0018133 Camellia sinensis var. sinensis HOM05D006938 ORTHO05D008600 8.2e-47 191.0 117 84.6
MD16G1000600 Malus domestica HOM05D006938 ORTHO05D008600 8.2e-47 191.0 181 58.0
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 1.1e-46 190.7 172 61.0
TWI53G1636 Tripterygium wilfordii HOM05D006938 ORTHO05D008600 1.1e-46 190.7 171 60.8
Lalb_Chr03g0035761 Lupinus albus HOM05D006938 ORTHO05D008600 1.4e-46 190.3 182 59.9
Lj6P721T41 Lonicera japonica HOM05D006938 ORTHO05D008600 1.8e-46 189.9 174 60.3
Actinidia11174 Actinidia chinensis HOM05D006938 ORTHO05D008600 2.4e-46 189.5 142 71.8
Aqoxy3G04277 Aquilegia oxysepala HOM05D006938 ORTHO05D008600 2.4e-46 189.5 184 56.5
Cpa.g.sc51.44 Carica papaya HOM05D006938 ORTHO05D008600 4.1e-46 188.7 189 59.3
Peaxi162Scf00363g00087 Petunia axillaris HOM05D006938 ORTHO05D008600 5.3e-46 188.3 180 60.0
Manes.10G035800 Manihot esculenta HOM05D006938 ORTHO05D008600 1.2e-45 187.2 178 61.2
MBI06_g36504_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 1.5e-45 186.8 182 59.3
Cc07_g19080 Coffea canephora HOM05D006938 ORTHO05D008600 2.6e-45 186.0 154 64.9
Thecc.03G060300 Theobroma cacao HOM05D006938 ORTHO05D008600 2.6e-45 186.0 186 57.0
PSO017G4971 Papaver somniferum HOM05D006938 ORTHO05D008600 4.5e-45 185.3 188 56.9
Nitab4.5_0002392g0050 Nicotiana tabacum HOM05D006938 ORTHO05D008600 5.9e-45 184.9 180 58.9
PSO478G3769 Papaver somniferum HOM05D006938 ORTHO05D008600 5.9e-45 184.9 123 74.0
Hund24283 Selenicereus undatus HOM05D006938 ORTHO05D008600 5.9e-45 184.9 178 59.6
SGA_v2.0_scaffold25G10864 Striga asiatica HOM05D006938 ORTHO05D008600 5.9e-45 184.9 171 61.4
ClCG09G005720 Citrullus lanatus HOM05D006938 ORTHO05D008600 1.0e-44 184.1 175 59.4
HanXRQChr17g0540771 Helianthus annuus HOM05D006938 ORTHO05D008600 1.0e-44 184.1 175 60.6
Atru.chr11.1233 Acer truncatum HOM05D006938 ORTHO05D008600 1.3e-44 183.7 184 56.0
Atru.chr11.1321 Acer truncatum HOM05D006938 ORTHO05D008600 1.3e-44 183.7 184 56.0
Nitab4.5_0000139g0080 Nicotiana tabacum HOM05D006938 ORTHO05D008600 1.3e-44 183.7 180 58.9
PGSC0003DMG400019837 Solanum tuberosum HOM05D006938 ORTHO05D008600 1.3e-44 183.7 138 69.6
vmacro22787 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 1.3e-44 183.7 128 77.3
CAN.G157.8 Capsicum annuum HOM05D006938 ORTHO05D008600 1.7e-44 183.3 178 57.3
ATR0618G369 Amborella trichopoda HOM05D006938 ORTHO05D008600 2.9e-44 182.6 103 86.4
Oeu024662.1 Olea europaea HOM05D006938 ORTHO05D008600 3.8e-44 182.2 167 61.7
MELO3C015984.2 Cucumis melo HOM05D006938 ORTHO05D008600 1.1e-43 180.6 178 60.1
ECA246G5327 Erigeron canadensis HOM05D006938 ORTHO05D008600 1.1e-43 180.6 152 65.1
Hma1.2p1_0499F.1_g166850 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 1.9e-43 179.9 122 76.2
CsaV3_7G029440 Cucumis sativus L. HOM05D006938 ORTHO05D008600 2.5e-43 179.5 176 57.4
Rhsim06G0126000 Rhododendron simsii HOM05D006938 ORTHO05D008600 4.2e-43 178.7 116 77.6
GSVIVG01010180001 Vitis vinifera HOM05D006938 ORTHO05D008600 4.2e-43 178.7 100 86.0
Nn4g24932 Nelumbo nucifera HOM05D006938 ORTHO05D008600 7.2e-43 177.9 184 58.7
Ciclev10032755m.g Citrus clementina HOM05D006938 ORTHO05D008600 1.6e-42 176.8 184 52.7
Gohir.A11G002500 Gossypium hirsutum HOM05D006938 ORTHO05D008600 1.6e-42 176.8 184 56.5
RcHm_v2.0_Chr3g0449681 Rosa chinensis HOM05D006938 ORTHO05D008600 2.7e-42 176.0 104 81.7
Sed0026401 Sechium edule HOM05D006938 ORTHO05D008600 2.7e-42 176.0 187 55.1
Gorai.007G003100 Gossypium raimondii HOM05D006938 ORTHO05D008600 4.7e-42 175.3 154 61.7
Sc20g0002200 Simmondsia chinensis HOM05D006938 ORTHO05D008600 4.7e-42 175.3 107 79.4
THA.LOC104805738 Tarenaya hassleriana HOM05D006938 ORTHO05D008600 6.1e-42 174.9 154 62.3
Gohir.D11G002100 Gossypium hirsutum HOM05D006938 ORTHO05D008600 1.0e-41 174.1 154 61.0
Sopen02g005300 Solanum pennellii HOM05D006938 ORTHO05D008600 1.0e-41 174.1 133 69.9
AUR62017669 Chenopodium quinoa HOM05D006938 ORTHO05D008600 1.4e-41 173.7 181 50.8
SGA_v2.0_scaffold467G52037 Striga asiatica HOM05D006938 ORTHO05D008600 1.8e-41 173.3 104 82.7
Solyc02g021000.3 Solanum lycopersicum HOM05D006938 ORTHO05D008600 2.3e-41 172.9 133 67.7
Ah.01g012920 Amaranthus hybridus HOM05D006938 ORTHO05D008600 5.2e-41 171.8 122 72.1
AL7G45100 Arabidopsis lyrata HOM05D006938 ORTHO05D008600 6.7e-41 171.4 148 62.8
BraA05t20549Z Brassica rapa HOM05D006938 ORTHO05D008600 1.1e-40 170.6 144 61.1
Lsat_1_v5_gn_3_33800 Lactuca sativa HOM05D006938 ORTHO05D008600 1.1e-40 170.6 108 81.5
AUR62015206 Chenopodium quinoa HOM05D006938 ORTHO05D008600 2.6e-40 169.5 112 72.3
BcaC08g44319 Brassica carinata HOM05D006938 ORTHO05D008600 3.3e-40 169.1 144 61.1
C06p17420 Brassica napus HOM05D006938 ORTHO05D008600 3.3e-40 169.1 144 61.1
BolC6t36937H Brassica oleracea HOM05D006938 ORTHO05D008600 3.3e-40 169.1 144 61.1
Thhalv10005006m.g Eutrema salsugineum HOM05D006938 ORTHO05D008600 4.4e-40 168.7 151 60.9
Oeu022179.1 Olea europaea HOM05D006938 ORTHO05D008600 5.7e-40 168.3 100 84.0
Migut.I00065 Erythranthe guttata HOM05D006938 ORTHO05D008600 9.7e-40 167.5 103 79.6
Manes.07G111600 Manihot esculenta HOM05D006938 ORTHO05D008600 9.7e-40 167.5 184 54.9
Carub.0007s3179 Capsella rubella HOM05D006938 ORTHO05D008600 1.7e-39 166.8 114 69.3
A05p16420 Brassica napus HOM05D006938 ORTHO05D008600 2.8e-39 166.0 144 61.1
BcaB02g08043 Brassica carinata HOM05D006938 ORTHO05D008600 3.7e-39 165.6 144 61.8
Sc10g0007070 Simmondsia chinensis HOM05D006938 ORTHO05D008600 3.7e-39 165.6 115 72.2
AT5G36120 Arabidopsis thaliana HOM05D006938 ORTHO05D008600 4.8e-39 165.2 148 61.5
Sp7g06080 Schrenkiella parvula HOM05D006938 ORTHO05D008600 8.2e-39 164.5 147 61.2
HPP92_002538 Vanilla planifolia HOM05D006938 ORTHO05D008600 1.1e-38 164.1 125 66.4
HPP92_002496 Vanilla planifolia HOM05D006938 ORTHO05D008600 4.1e-38 162.2 125 65.6
Os01g0966200 Oryza sativa ssp. japonica HOM05D006938 ORTHO05D008600 4.5e-37 158.7 119 69.7
Aa31LG9G17890 Aethionema arabicum HOM05D006938 ORTHO05D008600 5.9e-37 158.3 117 68.4
Mapoly0101s0070 Marchantia polymorpha HOM05D006938 ORTHO05D008600 5.0e-36 155.2 158 55.1
Zm00001eb362370 Zea mays HOM05D006938 ORTHO05D008600 4.2e-35 152.1 111 69.4
Pp3c10_19880 Physcomitrium patens HOM05D006938 ORTHO05D008600 7.2e-35 151.4 122 61.5
AagrBONN_evm.TU.Sc2ySwM_344.2773 Anthoceros agrestis HOM05D006938 ORTHO05D008600 1.5e-32 143.7 173 50.3
SEGI_34816 Sequoiadendron giganteum HOM05D006938 ORTHO05D008600 2.8e-31 139.4 103 64.1
CDE07G1356 Ceratophyllum demersum HOM05D002851 ORTHO05D003084 4.1e-30 135.6 95 72.6
MCO16G496 Micromonas commoda HOM05D006938 ORTHO05D008600 1.0e-28 131.0 103 62.1
unitig_21.g20451 Utricularia gibba HOM05D006938 ORTHO05D008600 3.6e-26 122.5 70 82.9
MBI06_g34033_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 6.1e-26 121.7 74 78.4
Peaxi162Scf00818g00021 Petunia axillaris HOM05D006938 ORTHO05D008600 8.8e-25 117.9 181 44.8
Cre01.g052400 Chlamydomonas reinhardtii HOM05D006938 ORTHO05D008600 6.1e-18 95.1 93 50.5
CDE06G1837 Ceratophyllum demersum HOM05D006938 ORTHO05D008600 5.2e-17 92.0 55 81.8
EL10Ac9g22924 Beta vulgaris HOM05D006938 ORTHO05D008600 5.7e-16 88.6 44 86.4
CsaV3_4G025230 Cucumis sativus L. HOM05D006938 ORTHO05D008600 1.3e-15 87.4 62 71.0
PRCOL_00002779 Prasinoderma coloniale HOM05D006938 ORTHO05D008600 2.8e-15 86.3 74 55.4
Sc10g0007050 Simmondsia chinensis HOM05D006938 ORTHO05D008600 3.3e-11 72.8 45 71.1
Migut.I00066 Erythranthe guttata HOM05D006938 ORTHO05D008600 2.3e-09 66.6 44 65.9


User provided reference genes

Program Settings